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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OHYZ] human gut metagenome; feces
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182327514
OHYZ01000587
[OHYZ] human gut metagenome; feces
92
19
-
Gly
TCC
[ENA]
¢þ
>WENV182327515
OHYZ01000634
[OHYZ] human gut metagenome; feces
106
180
+
Ile
GAT
[ENA]
¢þ
>WENV182327517
OHYZ01000685
[OHYZ] human gut metagenome; feces
115
199
+
Leu
GAG
[ENA]
¢þ
>WENV182327505
OHYZ01000102
[OHYZ] human gut metagenome; feces
132
220
+
Ser
GGA
[ENA]
¢þ
>WENV182327519
OHYZ01000765
[OHYZ] human gut metagenome; feces
141
59
-
Leu
TAG
[ENA]
¢þ
>WENV182327523
OHYZ01001241
[OHYZ] human gut metagenome; feces
169
95
-
Ile2
CAT
[ENA]
¢þ
>WENV182327513
OHYZ01000587
[OHYZ] human gut metagenome; feces
172
96
-
Pro
CGG
[ENA]
¢þ
>WENV182327528
OHYZ01002509
[OHYZ] human gut metagenome; feces
172
245
+
Pro
CGG
[ENA]
¢þ
>WENV182327516
OHYZ01000634
[OHYZ] human gut metagenome; feces
204
280
+
Met
CAT
[ENA]
¢þ
>WENV182327518
OHYZ01000685
[OHYZ] human gut metagenome; feces
312
399
+
Leu
TAA
[ENA]
¢þ
>WENV182327522
OHYZ01001048
[OHYZ] human gut metagenome; feces
326
401
+
Ala
CGC
[ENA]
¢þ
>WENV182327527
OHYZ01002345
[OHYZ] human gut metagenome; feces
330
257
-
Gln
TTG
[ENA]
¢þ
>WENV182327503
OHYZ01000028
[OHYZ] human gut metagenome; feces
340
415
+
Ala
TGC
[ENA]
¢þ
>WENV182327524
OHYZ01001723
[OHYZ] human gut metagenome; feces
348
273
-
Arg
TCT
[ENA]
¢þ
>WENV182327521
OHYZ01000883
[OHYZ] human gut metagenome; feces
370
445
+
Val
TAC
[ENA]
¢þ
>WENV182327529
OHYZ01002674
[OHYZ] human gut metagenome; feces
384
458
+
Thr
TGT
[ENA]
¢þ
>WENV182327526
OHYZ01002027
[OHYZ] human gut metagenome; feces
411
486
+
Asn
GTT
[ENA]
¢þ
>WENV182327504
OHYZ01000028
[OHYZ] human gut metagenome; feces
419
495
+
Ile
GAT
[ENA]
¢þ
>WENV182327525
OHYZ01001839
[OHYZ] human gut metagenome; feces
595
522
-
Trp
CCA
[ENA]
¢þ
>WENV182327510
OHYZ01000368
[OHYZ] human gut metagenome; feces
605
530
-
His
GTG
[ENA]
¢þ
>WENV182327520
OHYZ01000850
[OHYZ] human gut metagenome; feces
609
534
-
Arg
CCT
[ENA]
¢þ
>WENV182327511
OHYZ01000374
[OHYZ] human gut metagenome; feces
857
773
-
Leu
CAA
[ENA]
¢þ
>WENV182327512
OHYZ01000482
[OHYZ] human gut metagenome; feces
881
808
-
Phe
GAA
[ENA]
¢þ
>WENV182327506
OHYZ01000187
[OHYZ] human gut metagenome; feces
1058
1133
+
Lys
CTT
[ENA]
¢þ
>WENV182327507
OHYZ01000187
[OHYZ] human gut metagenome; feces
1138
1212
+
Glu
CTC
[ENA]
¢þ
>WENV182327508
OHYZ01000187
[OHYZ] human gut metagenome; feces
1216
1291
+
Lys
CTT
[ENA]
¢þ
>WENV182327509
OHYZ01000277
[OHYZ] human gut metagenome; feces
1351
1279
-
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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