This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OICP] human gut metagenome; feces
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182368983
OICP01000017
[OICP] human gut metagenome; feces
59
134
+
Ala
TGC
[ENA]
¢þ
>WENV182368998
OICP01000952
[OICP] human gut metagenome; feces
116
27
-
Ser
CGA
[ENA]
¢þ
>WENV182368984
OICP01000062
[OICP] human gut metagenome; feces
150
226
+
Arg
CCT
[ENA]
¢þ
>WENV182368994
OICP01000263
[OICP] human gut metagenome; feces
212
284
+
Gln
CTG
[ENA]
¢þ
>WENV182369003
OICP01001579
[OICP] human gut metagenome; feces
231
156
-
Trp
CCA
[ENA]
¢þ
>WENV182369006
OICP01001902
[OICP] human gut metagenome; feces
300
217
-
Tyr
GTA
[ENA]
¢þ
>WENV182368999
OICP01001120
[OICP] human gut metagenome; feces
311
238
-
Gln
CTG
[ENA]
¢þ
>WENV182369000
OICP01001388
[OICP] human gut metagenome; feces
398
469
+
Asn
GTT
[ENA]
¢þ
>WENV182369004
OICP01001584
[OICP] human gut metagenome; feces
415
499
+
Leu
TAG
[ENA]
¢þ
>WENV182369002
OICP01001527
[OICP] human gut metagenome; feces
419
344
-
Ala
TGC
[ENA]
¢þ
>WENV182368993
OICP01000205
[OICP] human gut metagenome; feces
421
347
-
fMet
CAT
[ENA]
¢þ
>WENV182369001
OICP01001388
[OICP] human gut metagenome; feces
484
555
+
Glu
TTC
[ENA]
¢þ
>WENV182369005
OICP01001902
[OICP] human gut metagenome; feces
491
417
-
Thr
TGT
[ENA]
¢þ
>WENV182368996
OICP01000709
[OICP] human gut metagenome; feces
493
568
+
Pro
TGG
[ENA]
¢þ
>WENV182368992
OICP01000205
[OICP] human gut metagenome; feces
533
450
-
Tyr
GTA
[ENA]
¢þ
>WENV182368997
OICP01000709
[OICP] human gut metagenome; feces
587
657
+
Gly
TCC
[ENA]
¢þ
>WENV182368991
OICP01000205
[OICP] human gut metagenome; feces
634
562
-
Thr
TGT
[ENA]
¢þ
>WENV182368995
OICP01000267
[OICP] human gut metagenome; feces
724
648
-
Ile
GAT
[ENA]
¢þ
>WENV182368990
OICP01000205
[OICP] human gut metagenome; feces
733
659
-
Val
TAC
[ENA]
¢þ
>WENV182368989
OICP01000137
[OICP] human gut metagenome; feces
891
818
-
Gly
GCC
[ENA]
¢þ
>WENV182368988
OICP01000096
[OICP] human gut metagenome; feces
1071
985
-
Leu
AAG
[ENA]
¢þ
>WENV182368987
OICP01000085
[OICP] human gut metagenome; feces
1235
1162
-
Gln
TTG
[ENA]
¢þ
>WENV182368986
OICP01000085
[OICP] human gut metagenome; feces
1318
1244
-
His
GTG
[ENA]
¢þ
>WENV182368985
OICP01000085
[OICP] human gut metagenome; feces
1441
1366
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK