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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OIEY] human gut metagenome; human gut
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182406293
OIEY01001066
[OIEY] human gut metagenome; human gut
44
116
+
Gln
TTG
[ENA]
¢þ
>WENV182406298
OIEY01001857
[OIEY] human gut metagenome; human gut
94
20
-
Thr
TGT
[ENA]
¢þ
>WENV182406294
OIEY01001304
[OIEY] human gut metagenome; human gut
110
185
+
Lys
TTT
[ENA]
¢þ
>WENV182406288
OIEY01000335
[OIEY] human gut metagenome; human gut
189
116
-
Trp
CCA
[ENA]
¢þ
>WENV182406296
OIEY01001632
[OIEY] human gut metagenome; human gut
251
324
+
Thr
CGT
[ENA]
¢þ
>WENV182406295
OIEY01001304
[OIEY] human gut metagenome; human gut
291
362
+
Glu
TTC
[ENA]
¢þ
>WENV182406299
OIEY01002304
[OIEY] human gut metagenome; human gut
300
374
+
Glu
TTC
[ENA]
¢þ
>WENV182406302
OIEY01003024
[OIEY] human gut metagenome; human gut
349
261
-
Ser
GGA
[ENA]
¢þ
>WENV182406290
OIEY01000877
[OIEY] human gut metagenome; human gut
409
336
-
Trp
CCA
[ENA]
¢þ
>WENV182406283
OIEY01000041
[OIEY] human gut metagenome; human gut
497
571
+
Ile2
CAT
[ENA]
¢þ
>WENV182406301
OIEY01002831
[OIEY] human gut metagenome; human gut
651
576
-
Gly
GCC
[ENA]
¢þ
>WENV182406300
OIEY01002344
[OIEY] human gut metagenome; human gut
669
583
-
Leu
GAG
[ENA]
¢þ
>WENV182406291
OIEY01000947
[OIEY] human gut metagenome; human gut
686
600
-
Leu
CAG
[ENA]
¢þ
>WENV182406289
OIEY01000467
[OIEY] human gut metagenome; human gut
767
679
-
Ser
GGA
[ENA]
¢þ
>WENV182406297
OIEY01001740
[OIEY] human gut metagenome; human gut
821
738
-
Tyr
GTA
[ENA]
¢þ
>WENV182406292
OIEY01000980
[OIEY] human gut metagenome; human gut
835
751
-
Leu
CAA
[ENA]
¢þ
>WENV182406284
OIEY01000068
[OIEY] human gut metagenome; human gut
1021
1103
+
Leu
TAG
[ENA]
¢þ
>WENV182406287
OIEY01000314
[OIEY] human gut metagenome; human gut
1026
952
-
Ile2
CAT
[ENA]
¢þ
>WENV182406286
OIEY01000124
[OIEY] human gut metagenome; human gut
1658
1584
-
fMet
CAT
[ENA]
¢þ
>WENV182406285
OIEY01000069
[OIEY] human gut metagenome; human gut
2414
2489
+
Pro
GGG
[ENA]
¢þ
>WENV182406282
OIEY01000012
[OIEY] human gut metagenome; human gut
4171
4097
-
Ala
TGC
[ENA]
¢þ
>WENV182406281
OIEY01000012
[OIEY] human gut metagenome; human gut
4255
4181
-
Ile
GAT
[ENA]
¢þ
>WENV182406280
OIEY01000006
[OIEY] human gut metagenome; human gut
4945
5017
+
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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