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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA gene List
[OIJN] human gut metagenome; human gut
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182438410
OIJN01001006
[OIJN] human gut metagenome; human gut
50
126
+
Arg
CCT
[ENA]
¢þ
>WENV182438408
OIJN01000867
[OIJN] human gut metagenome; human gut
70
141
+
Cys
GCA
[ENA]
¢þ
>WENV182438403
OIJN01000617
[OIJN] human gut metagenome; human gut
76
4
-
Glu
CTC
[ENA]
¢þ
>WENV182438463
OIJN01007629
[OIJN] human gut metagenome; human gut
82
156
+
Gly
TCC
[ENA]
¢þ
>WENV182438425
OIJN01001933
[OIJN] human gut metagenome; human gut
88
159
+
Asn
GTT
[ENA]
¢þ
>WENV182438422
OIJN01001868
[OIJN] human gut metagenome; human gut
146
221
+
Gly
CCC
[ENA]
¢þ
>WENV182438462
OIJN01007564
[OIJN] human gut metagenome; human gut
151
227
+
His
GTG
[ENA]
¢þ
>WENV182438433
OIJN01002309
[OIJN] human gut metagenome; human gut
152
78
-
Met
CAT
[ENA]
¢þ
>WENV182438448
OIJN01004601
[OIJN] human gut metagenome; human gut
166
253
+
Ser
GCT
[ENA]
¢þ
>WENV182438426
OIJN01001933
[OIJN] human gut metagenome; human gut
174
245
+
Glu
TTC
[ENA]
¢þ
>WENV182438468
OIJN01009544
[OIJN] human gut metagenome; human gut
176
251
+
Pro
TGG
[ENA]
¢þ
>WENV182438452
OIJN01005941
[OIJN] human gut metagenome; human gut
182
256
+
Ile
GAT
[ENA]
¢þ
>WENV182438444
OIJN01003688
[OIJN] human gut metagenome; human gut
212
139
-
Ile2
CAT
[ENA]
¢þ
>WENV182438466
OIJN01008931
[OIJN] human gut metagenome; human gut
219
295
+
Met
CAT
[ENA]
¢þ
>WENV182438456
OIJN01006480
[OIJN] human gut metagenome; human gut
243
315
+
Gly
GCC
[ENA]
¢þ
>WENV182438438
OIJN01002952
[OIJN] human gut metagenome; human gut
244
318
+
Thr
TGT
[ENA]
¢þ
>WENV182438414
OIJN01001198
[OIJN] human gut metagenome; human gut
250
177
-
Pro
CGG
[ENA]
¢þ
>WENV182438432
OIJN01002309
[OIJN] human gut metagenome; human gut
252
176
-
Val
TAC
[ENA]
¢þ
>WENV182438429
OIJN01001966
[OIJN] human gut metagenome; human gut
281
353
+
Glu
TTC
[ENA]
¢þ
>WENV182438464
OIJN01008809
[OIJN] human gut metagenome; human gut
286
213
-
Asn
GTT
[ENA]
¢þ
>WENV182438427
OIJN01001933
[OIJN] human gut metagenome; human gut
290
362
+
Thr
TGT
[ENA]
¢þ
>WENV182438450
OIJN01004947
[OIJN] human gut metagenome; human gut
302
377
+
Trp
CCA
[ENA]
¢þ
>WENV182438458
OIJN01006791
[OIJN] human gut metagenome; human gut
332
257
-
Gly
CCC
[ENA]
¢þ
>WENV182438435
OIJN01002607
[OIJN] human gut metagenome; human gut
337
254
-
Leu
CAA
[ENA]
¢þ
>WENV182438454
OIJN01006133
[OIJN] human gut metagenome; human gut
347
254
-
Ser
GCT
[ENA]
¢þ
>WENV182438465
OIJN01008878
[OIJN] human gut metagenome; human gut
367
438
+
Gln
CTG
[ENA]
¢þ
>WENV182438460
OIJN01007202
[OIJN] human gut metagenome; human gut
368
444
+
Arg
TCT
[ENA]
¢þ
>WENV182438388
OIJN01000067
[OIJN] human gut metagenome; human gut
387
312
-
Lys
CTT
[ENA]
¢þ
>WENV182438467
OIJN01008931
[OIJN] human gut metagenome; human gut
387
458
+
Glu
TTC
[ENA]
¢þ
>WENV182438428
OIJN01001933
[OIJN] human gut metagenome; human gut
391
474
+
Tyr
GTA
[ENA]
¢þ
>WENV182438459
OIJN01006884
[OIJN] human gut metagenome; human gut
395
483
+
Ser
GGA
[ENA]
¢þ
>WENV182438439
OIJN01002952
[OIJN] human gut metagenome; human gut
403
486
+
Tyr
GTA
[ENA]
¢þ
>WENV182438400
OIJN01000555
[OIJN] human gut metagenome; human gut
413
492
+
Leu
CAA
[ENA]
¢þ
>WENV182438389
OIJN01000109
[OIJN] human gut metagenome; human gut
436
512
+
Arg
ACG
[ENA]
¢þ
>WENV182438430
OIJN01002127
[OIJN] human gut metagenome; human gut
440
511
+
Gln
TTG
[ENA]
¢þ
>WENV182438461
OIJN01007202
[OIJN] human gut metagenome; human gut
451
527
+
His
GTG
[ENA]
¢þ
>WENV182438442
OIJN01003388
[OIJN] human gut metagenome; human gut
459
532
+
Lys
CTT
[ENA]
¢þ
>WENV182438387
OIJN01000067
[OIJN] human gut metagenome; human gut
465
391
-
Glu
CTC
[ENA]
¢þ
>WENV182438453
OIJN01006133
[OIJN] human gut metagenome; human gut
468
381
-
Ser
TGA
[ENA]
¢þ
>WENV182438436
OIJN01002671
[OIJN] human gut metagenome; human gut
479
552
+
Trp
CCA
[ENA]
¢þ
>WENV182438431
OIJN01002169
[OIJN] human gut metagenome; human gut
494
418
-
fMet
CAT
[ENA]
¢þ
>WENV182438445
OIJN01003903
[OIJN] human gut metagenome; human gut
570
495
-
Pro
GGG
[ENA]
¢þ
>WENV182438457
OIJN01006688
[OIJN] human gut metagenome; human gut
573
664
+
Ser
GGA
[ENA]
¢þ
>WENV182438440
OIJN01002952
[OIJN] human gut metagenome; human gut
580
652
+
Thr
GGT
[ENA]
¢þ
>WENV182438455
OIJN01006420
[OIJN] human gut metagenome; human gut
580
653
+
Thr
CGT
[ENA]
¢þ
>WENV182438441
OIJN01003066
[OIJN] human gut metagenome; human gut
581
654
+
Gln
CTG
[ENA]
¢þ
>WENV182438449
OIJN01004601
[OIJN] human gut metagenome; human gut
608
682
+
Glu
CTC
[ENA]
¢þ
>WENV182438423
OIJN01001870
[OIJN] human gut metagenome; human gut
637
709
+
Phe
GAA
[ENA]
¢þ
>WENV182438437
OIJN01002712
[OIJN] human gut metagenome; human gut
643
714
+
Gln
TTG
[ENA]
¢þ
>WENV182438451
OIJN01004947
[OIJN] human gut metagenome; human gut
662
738
+
Asp
GTC
[ENA]
¢þ
>WENV182438434
OIJN01002484
[OIJN] human gut metagenome; human gut
669
595
-
Phe
GAA
[ENA]
¢þ
>WENV182438424
OIJN01001870
[OIJN] human gut metagenome; human gut
723
797
+
Lys
TTT
[ENA]
¢þ
>WENV182438418
OIJN01001494
[OIJN] human gut metagenome; human gut
728
653
-
Ala
GGC
[ENA]
¢þ
>WENV182438401
OIJN01000581
[OIJN] human gut metagenome; human gut
732
659
-
Gly
GCC
[ENA]
¢þ
>WENV182438443
OIJN01003631
[OIJN] human gut metagenome; human gut
745
825
+
Leu
TAG
[ENA]
¢þ
>WENV182438447
OIJN01003968
[OIJN] human gut metagenome; human gut
754
679
-
Arg
ACG
[ENA]
¢þ
>WENV182438419
OIJN01001664
[OIJN] human gut metagenome; human gut
780
855
+
Pro
TGG
[ENA]
¢þ
>WENV182438411
OIJN01001017
[OIJN] human gut metagenome; human gut
868
953
+
Ser
TGA
[ENA]
¢þ
>WENV182438420
OIJN01001664
[OIJN] human gut metagenome; human gut
874
944
+
Gly
TCC
[ENA]
¢þ
>WENV182438446
OIJN01003968
[OIJN] human gut metagenome; human gut
890
805
-
Leu
TAA
[ENA]
¢þ
>WENV182438396
OIJN01000394
[OIJN] human gut metagenome; human gut
949
877
-
Gln
CTG
[ENA]
¢þ
>WENV182438421
OIJN01001691
[OIJN] human gut metagenome; human gut
953
881
-
Trp
CCA
[ENA]
¢þ
>WENV182438395
OIJN01000394
[OIJN] human gut metagenome; human gut
1043
957
-
Ser
TGA
[ENA]
¢þ
>WENV182438412
OIJN01001039
[OIJN] human gut metagenome; human gut
1087
1161
+
Ile2
CAT
[ENA]
¢þ
>WENV182438417
OIJN01001382
[OIJN] human gut metagenome; human gut
1136
1211
+
Thr
GGT
[ENA]
¢þ
>WENV182438399
OIJN01000492
[OIJN] human gut metagenome; human gut
1160
1087
-
Ile
GAT
[ENA]
¢þ
>WENV182438415
OIJN01001249
[OIJN] human gut metagenome; human gut
1162
1076
-
Leu
AAG
[ENA]
¢þ
>WENV182438392
OIJN01000260
[OIJN] human gut metagenome; human gut
1276
1360
+
Leu
CAA
[ENA]
¢þ
>WENV182438409
OIJN01000889
[OIJN] human gut metagenome; human gut
1283
1207
-
Val
CAC
[ENA]
¢þ
>WENV182438405
OIJN01000730
[OIJN] human gut metagenome; human gut
1317
1400
+
Leu
CAG
[ENA]
¢þ
>WENV182438404
OIJN01000707
[OIJN] human gut metagenome; human gut
1320
1393
+
Arg
CCT
[ENA]
¢þ
>WENV182438416
OIJN01001378
[OIJN] human gut metagenome; human gut
1409
1483
+
Lys
CTT
[ENA]
¢þ
>WENV182438413
OIJN01001059
[OIJN] human gut metagenome; human gut
1414
1340
-
Arg
CCG
[ENA]
¢þ
>WENV182438397
OIJN01000411
[OIJN] human gut metagenome; human gut
1473
1548
+
Phe
GAA
[ENA]
¢þ
>WENV182438406
OIJN01000766
[OIJN] human gut metagenome; human gut
1540
1449
-
Ser
CGA
[ENA]
¢þ
>WENV182438398
OIJN01000411
[OIJN] human gut metagenome; human gut
1552
1627
+
Gly
GCC
[ENA]
¢þ
>WENV182438391
OIJN01000163
[OIJN] human gut metagenome; human gut
1572
1498
-
Ala
TGC
[ENA]
¢þ
>WENV182438390
OIJN01000163
[OIJN] human gut metagenome; human gut
1663
1589
-
Ile
GAT
[ENA]
¢þ
>WENV182438407
OIJN01000865
[OIJN] human gut metagenome; human gut
1689
1764
+
Val
GAC
[ENA]
¢þ
>WENV182438402
OIJN01000592
[OIJN] human gut metagenome; human gut
1693
1621
-
Arg
CCT
[ENA]
¢þ
>WENV182438393
OIJN01000314
[OIJN] human gut metagenome; human gut
2021
1935
-
Leu
CAG
[ENA]
¢þ
>WENV182438394
OIJN01000389
[OIJN] human gut metagenome; human gut
2147
2074
-
Lys
TTT
[ENA]
¢þ
>WENV182438386
OIJN01000038
[OIJN] human gut metagenome; human gut
2445
2516
+
Thr
GGT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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