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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OIJR] human gut metagenome; human gut
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182439317
OIJR01002386
[OIJR] human gut metagenome; human gut
35
109
+
Arg
TCT
[ENA]
¢þ
>WENV182439315
OIJR01002048
[OIJR] human gut metagenome; human gut
75
147
+
Thr
CGT
[ENA]
¢þ
>WENV182439279
OIJR01000298
[OIJR] human gut metagenome; human gut
81
153
+
Arg
CCG
[ENA]
¢þ
>WENV182439306
OIJR01001535
[OIJR] human gut metagenome; human gut
95
170
+
Val
TAC
[ENA]
¢þ
>WENV182439321
OIJR01002741
[OIJR] human gut metagenome; human gut
115
27
-
Ser
GGA
[ENA]
¢þ
>WENV182439318
OIJR01002386
[OIJR] human gut metagenome; human gut
116
190
+
His
GTG
[ENA]
¢þ
>WENV182439316
OIJR01002083
[OIJR] human gut metagenome; human gut
152
79
-
Ile
TAT
[ENA]
¢þ
>WENV182439309
OIJR01001645
[OIJR] human gut metagenome; human gut
178
253
+
Ala
TGC
[ENA]
¢þ
>WENV182439259
OIJR01000110
[OIJR] human gut metagenome; human gut
187
113
-
Met
CAT
[ENA]
¢þ
>WENV182439292
OIJR01000858
[OIJR] human gut metagenome; human gut
201
275
+
Glu
CTC
[ENA]
¢þ
>WENV182439303
OIJR01001398
[OIJR] human gut metagenome; human gut
221
296
+
Arg
CCT
[ENA]
¢þ
>WENV182439258
OIJR01000088
[OIJR] human gut metagenome; human gut
232
157
-
His
GTG
[ENA]
¢þ
>WENV182439296
OIJR01001249
[OIJR] human gut metagenome; human gut
240
153
-
Ser
GCT
[ENA]
¢þ
>WENV182439320
OIJR01002741
[OIJR] human gut metagenome; human gut
260
173
-
Ser
TGA
[ENA]
¢þ
>WENV182439280
OIJR01000331
[OIJR] human gut metagenome; human gut
283
209
-
Asn
GTT
[ENA]
¢þ
>WENV182439294
OIJR01001075
[OIJR] human gut metagenome; human gut
296
386
+
Ser
CGA
[ENA]
¢þ
>WENV182439322
OIJR01003255
[OIJR] human gut metagenome; human gut
307
226
-
Leu
TAG
[ENA]
¢þ
>WENV182439314
OIJR01001907
[OIJR] human gut metagenome; human gut
312
221
-
Ser
GGA
[ENA]
¢þ
>WENV182439305
OIJR01001478
[OIJR] human gut metagenome; human gut
323
234
-
Ser
GCT
[ENA]
¢þ
>WENV182439301
OIJR01001326
[OIJR] human gut metagenome; human gut
371
296
-
Thr
GGT
[ENA]
¢þ
>WENV182439290
OIJR01000759
[OIJR] human gut metagenome; human gut
385
303
-
Leu
TAG
[ENA]
¢þ
>WENV182439288
OIJR01000624
[OIJR] human gut metagenome; human gut
424
497
+
Thr
CGT
[ENA]
¢þ
>WENV182439312
OIJR01001838
[OIJR] human gut metagenome; human gut
438
365
-
Ile
GAT
[ENA]
¢þ
>WENV182439304
OIJR01001478
[OIJR] human gut metagenome; human gut
441
354
-
Ser
TGA
[ENA]
¢þ
>WENV182439300
OIJR01001326
[OIJR] human gut metagenome; human gut
451
375
-
Asp
GTC
[ENA]
¢þ
>WENV182439310
OIJR01001743
[OIJR] human gut metagenome; human gut
457
384
-
Thr
CGT
[ENA]
¢þ
>WENV182439313
OIJR01001842
[OIJR] human gut metagenome; human gut
478
551
+
fMet
CAT
[ENA]
¢þ
>WENV182439302
OIJR01001327
[OIJR] human gut metagenome; human gut
494
408
-
Leu
CAG
[ENA]
¢þ
>WENV182439307
OIJR01001557
[OIJR] human gut metagenome; human gut
507
580
+
Glu
TTC
[ENA]
¢þ
>WENV182439319
OIJR01002476
[OIJR] human gut metagenome; human gut
514
442
-
Pro
TGG
[ENA]
¢þ
>WENV182439311
OIJR01001791
[OIJR] human gut metagenome; human gut
516
587
+
Gln
CTG
[ENA]
¢þ
>WENV182439299
OIJR01001326
[OIJR] human gut metagenome; human gut
556
481
-
Gly
GCC
[ENA]
¢þ
>WENV182439308
OIJR01001557
[OIJR] human gut metagenome; human gut
603
675
+
Thr
TGT
[ENA]
¢þ
>WENV182439260
OIJR01000120
[OIJR] human gut metagenome; human gut
636
563
-
Lys
CTT
[ENA]
¢þ
>WENV182439298
OIJR01001326
[OIJR] human gut metagenome; human gut
661
586
-
Phe
GAA
[ENA]
¢þ
>WENV182439267
OIJR01000215
[OIJR] human gut metagenome; human gut
759
684
-
Pro
GGG
[ENA]
¢þ
>WENV182439295
OIJR01001234
[OIJR] human gut metagenome; human gut
790
862
+
Phe
GAA
[ENA]
¢þ
>WENV182439297
OIJR01001253
[OIJR] human gut metagenome; human gut
829
754
-
Ala
TGC
[ENA]
¢þ
>WENV182439293
OIJR01000927
[OIJR] human gut metagenome; human gut
832
756
-
Arg
ACG
[ENA]
¢þ
>WENV182439291
OIJR01000848
[OIJR] human gut metagenome; human gut
1316
1400
+
Leu
CAA
[ENA]
¢þ
>WENV182439289
OIJR01000691
[OIJR] human gut metagenome; human gut
1618
1703
+
Ser
TGA
[ENA]
¢þ
>WENV182439268
OIJR01000232
[OIJR] human gut metagenome; human gut
1702
1777
+
Lys
TTT
[ENA]
¢þ
>WENV182439257
OIJR01000063
[OIJR] human gut metagenome; human gut
2140
2216
+
Val
TAC
[ENA]
¢þ
>WENV182439287
OIJR01000545
[OIJR] human gut metagenome; human gut
2192
2266
+
Ala
GGC
[ENA]
¢þ
>WENV182439282
OIJR01000356
[OIJR] human gut metagenome; human gut
2235
2310
+
Gly
CCC
[ENA]
¢þ
>WENV182439262
OIJR01000124
[OIJR] human gut metagenome; human gut
2516
2443
-
Gly
GCC
[ENA]
¢þ
>WENV182439281
OIJR01000346
[OIJR] human gut metagenome; human gut
2535
2462
-
Trp
CCA
[ENA]
¢þ
>WENV182439266
OIJR01000212
[OIJR] human gut metagenome; human gut
2803
2729
-
Arg
TCT
[ENA]
¢þ
>WENV182439286
OIJR01000403
[OIJR] human gut metagenome; human gut
2895
2966
+
Gln
TTG
[ENA]
¢þ
>WENV182439269
OIJR01000258
[OIJR] human gut metagenome; human gut
2956
3030
+
Asp
GTC
[ENA]
¢þ
>WENV182439284
OIJR01000357
[OIJR] human gut metagenome; human gut
3237
3163
-
Ala
TGC
[ENA]
¢þ
>WENV182439265
OIJR01000209
[OIJR] human gut metagenome; human gut
3275
3187
-
Ser
GGA
[ENA]
¢þ
>WENV182439283
OIJR01000357
[OIJR] human gut metagenome; human gut
3328
3254
-
Ile
GAT
[ENA]
¢þ
>WENV182439264
OIJR01000143
[OIJR] human gut metagenome; human gut
4054
4126
+
Arg
CCT
[ENA]
¢þ
>WENV182439285
OIJR01000394
[OIJR] human gut metagenome; human gut
4494
4568
+
Cys
GCA
[ENA]
¢þ
>WENV182439278
OIJR01000286
[OIJR] human gut metagenome; human gut
5420
5346
-
Thr
TGT
[ENA]
¢þ
>WENV182439277
OIJR01000286
[OIJR] human gut metagenome; human gut
5498
5425
-
His
GTG
[ENA]
¢þ
>WENV182439276
OIJR01000286
[OIJR] human gut metagenome; human gut
5575
5504
-
Arg
TCG
[ENA]
¢þ
>WENV182439275
OIJR01000286
[OIJR] human gut metagenome; human gut
5659
5588
-
Gln
TTG
[ENA]
¢þ
>WENV182439274
OIJR01000286
[OIJR] human gut metagenome; human gut
5850
5777
-
Phe
GAA
[ENA]
¢þ
>WENV182439273
OIJR01000286
[OIJR] human gut metagenome; human gut
5930
5859
-
Gln
CTG
[ENA]
¢þ
>WENV182439272
OIJR01000286
[OIJR] human gut metagenome; human gut
6022
5936
-
Ser
TGA
[ENA]
¢þ
>WENV182439271
OIJR01000286
[OIJR] human gut metagenome; human gut
6104
6029
-
Arg
ACG
[ENA]
¢þ
>WENV182439270
OIJR01000286
[OIJR] human gut metagenome; human gut
6195
6110
-
Ser
GCT
[ENA]
¢þ
>WENV182439261
OIJR01000123
[OIJR] human gut metagenome; human gut
8066
7992
-
Thr
TGT
[ENA]
¢þ
>WENV182439263
OIJR01000142
[OIJR] human gut metagenome; human gut
8650
8579
-
Gln
CTG
[ENA]
¢þ
>WENV182439255
OIJR01000043
[OIJR] human gut metagenome; human gut
12825
12750
-
Phe
GAA
[ENA]
¢þ
>WENV182439254
OIJR01000043
[OIJR] human gut metagenome; human gut
13006
13079
+
Pro
CGG
[ENA]
¢þ
>WENV182439248
OIJR01000008
[OIJR] human gut metagenome; human gut
14553
14626
+
fMet
CAT
[ENA]
¢þ
>WENV182439256
OIJR01000059
[OIJR] human gut metagenome; human gut
14602
14676
+
Ile2
CAT
[ENA]
¢þ
>WENV182439249
OIJR01000008
[OIJR] human gut metagenome; human gut
14844
14917
+
Asn
GTT
[ENA]
¢þ
>WENV182439250
OIJR01000008
[OIJR] human gut metagenome; human gut
14924
14997
+
Trp
CCA
[ENA]
¢þ
>WENV182439251
OIJR01000008
[OIJR] human gut metagenome; human gut
15002
15073
+
Gln
TTG
[ENA]
¢þ
>WENV182439252
OIJR01000008
[OIJR] human gut metagenome; human gut
15078
15150
+
Glu
TTC
[ENA]
¢þ
>WENV182439253
OIJR01000008
[OIJR] human gut metagenome; human gut
15314
15396
+
Tyr
GTA
[ENA]
¢þ
>WENV182439247
OIJR01000003
[OIJR] human gut metagenome; human gut
30300
30227
-
Trp
CCA
[ENA]
¢þ
>WENV182439246
OIJR01000003
[OIJR] human gut metagenome; human gut
31665
31593
-
Thr
GGT
[ENA]
¢þ
>WENV182439245
OIJR01000003
[OIJR] human gut metagenome; human gut
31841
31758
-
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK