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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OIKJ] human gut metagenome; human gut
HIT:
150 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182443091
OIKJ01000969
[OIKJ] human gut metagenome; human gut
5
80
+
Lys
CTT
[ENA]
¢þ
>WENV182443110
OIKJ01001830
[OIKJ] human gut metagenome; human gut
11
87
+
Met
CAT
[ENA]
¢þ
>WENV182443125
OIKJ01003130
[OIKJ] human gut metagenome; human gut
61
136
+
His
GTG
[ENA]
¢þ
>WENV182443105
OIKJ01001605
[OIKJ] human gut metagenome; human gut
64
138
+
His
GTG
[ENA]
¢þ
>WENV182443100
OIKJ01001518
[OIKJ] human gut metagenome; human gut
75
1
-
Ala
TGC
[ENA]
¢þ
>WENV182443061
OIKJ01000116
[OIKJ] human gut metagenome; human gut
76
1
-
Thr
GGT
[ENA]
¢þ
>WENV182443133
OIKJ01003739
[OIKJ] human gut metagenome; human gut
81
6
-
fMet
CAT
[ENA]
¢þ
>WENV182443120
OIKJ01002652
[OIKJ] human gut metagenome; human gut
81
168
+
Leu
TAA
[ENA]
¢þ
>WENV182443086
OIKJ01000821
[OIKJ] human gut metagenome; human gut
84
158
+
Cys
GCA
[ENA]
¢þ
>WENV182443149
OIKJ01005157
[OIKJ] human gut metagenome; human gut
85
1
-
Tyr
GTA
[ENA]
¢þ
>WENV182443143
OIKJ01003978
[OIKJ] human gut metagenome; human gut
87
162
+
Gly
GCC
[ENA]
¢þ
>WENV182443154
OIKJ01006109
[OIKJ] human gut metagenome; human gut
89
164
+
Lys
TTT
[ENA]
¢þ
>WENV182443128
OIKJ01003228
[OIKJ] human gut metagenome; human gut
117
25
-
Ser
GCT
[ENA]
¢þ
>WENV182443156
OIKJ01006268
[OIKJ] human gut metagenome; human gut
133
58
-
Val
TAC
[ENA]
¢þ
>WENV182443138
OIKJ01003870
[OIKJ] human gut metagenome; human gut
151
222
+
Arg
CCG
[ENA]
¢þ
>WENV182443130
OIKJ01003575
[OIKJ] human gut metagenome; human gut
163
87
-
fMet
CAT
[ENA]
¢þ
>WENV182443033
OIKJ01000025
[OIKJ] human gut metagenome; human gut
165
89
-
Val
TAC
[ENA]
¢þ
>WENV182443099
OIKJ01001518
[OIKJ] human gut metagenome; human gut
166
92
-
Ile
GAT
[ENA]
¢þ
>WENV182443157
OIKJ01006643
[OIKJ] human gut metagenome; human gut
177
101
-
Arg
CCT
[ENA]
¢þ
>WENV182443111
OIKJ01001830
[OIKJ] human gut metagenome; human gut
179
253
+
Glu
TTC
[ENA]
¢þ
>WENV182443126
OIKJ01003130
[OIKJ] human gut metagenome; human gut
189
260
+
Gln
TTG
[ENA]
¢þ
>WENV182443161
OIKJ01008059
[OIKJ] human gut metagenome; human gut
195
271
+
fMet
CAT
[ENA]
¢þ
>WENV182443148
OIKJ01004605
[OIKJ] human gut metagenome; human gut
197
110
-
Ser
TGA
[ENA]
¢þ
>WENV182443129
OIKJ01003425
[OIKJ] human gut metagenome; human gut
198
289
+
Ser
CGA
[ENA]
¢þ
>WENV182443044
OIKJ01000039
[OIKJ] human gut metagenome; human gut
206
131
-
Pro
GGG
[ENA]
¢þ
>WENV182443107
OIKJ01001648
[OIKJ] human gut metagenome; human gut
225
149
-
Arg
ACG
[ENA]
¢þ
>WENV182443135
OIKJ01003771
[OIKJ] human gut metagenome; human gut
242
166
-
Ile
GAT
[ENA]
¢þ
>WENV182443046
OIKJ01000047
[OIKJ] human gut metagenome; human gut
243
170
-
fMet
CAT
[ENA]
¢þ
>WENV182443151
OIKJ01005889
[OIKJ] human gut metagenome; human gut
286
361
+
Ile2
CAT
[ENA]
¢þ
>WENV182443144
OIKJ01004079
[OIKJ] human gut metagenome; human gut
288
203
-
Ser
CGA
[ENA]
¢þ
>WENV182443142
OIKJ01003973
[OIKJ] human gut metagenome; human gut
289
215
-
Phe
GAA
[ENA]
¢þ
>WENV182443127
OIKJ01003130
[OIKJ] human gut metagenome; human gut
297
370
+
Lys
TTT
[ENA]
¢þ
>WENV182443162
OIKJ01008059
[OIKJ] human gut metagenome; human gut
299
374
+
Thr
GGT
[ENA]
¢þ
>WENV182443165
OIKJ01008733
[OIKJ] human gut metagenome; human gut
313
386
+
Lys
CTT
[ENA]
¢þ
>WENV182443134
OIKJ01003771
[OIKJ] human gut metagenome; human gut
321
246
-
Ala
TGC
[ENA]
¢þ
>WENV182443106
OIKJ01001605
[OIKJ] human gut metagenome; human gut
339
425
+
Leu
CAG
[ENA]
¢þ
>WENV182443103
OIKJ01001567
[OIKJ] human gut metagenome; human gut
362
273
-
Ser
GCT
[ENA]
¢þ
>WENV182443155
OIKJ01006113
[OIKJ] human gut metagenome; human gut
376
450
+
Arg
CCT
[ENA]
¢þ
>WENV182443163
OIKJ01008059
[OIKJ] human gut metagenome; human gut
376
452
+
Met
CAT
[ENA]
¢þ
>WENV182443141
OIKJ01003973
[OIKJ] human gut metagenome; human gut
382
308
-
fMet
CAT
[ENA]
¢þ
>WENV182443158
OIKJ01006682
[OIKJ] human gut metagenome; human gut
387
467
+
Leu
TAG
[ENA]
¢þ
>WENV182443115
OIKJ01002011
[OIKJ] human gut metagenome; human gut
389
315
-
Gln
CTG
[ENA]
¢þ
>WENV182443153
OIKJ01006100
[OIKJ] human gut metagenome; human gut
402
327
-
Ala
CGC
[ENA]
¢þ
>WENV182443159
OIKJ01007013
[OIKJ] human gut metagenome; human gut
407
483
+
Arg
TCT
[ENA]
¢þ
>WENV182443018
OIKJ01000004
[OIKJ] human gut metagenome; human gut
413
487
+
Glu
CTC
[ENA]
¢þ
>WENV182443132
OIKJ01003728
[OIKJ] human gut metagenome; human gut
417
345
-
Trp
CCA
[ENA]
¢þ
>WENV182443054
OIKJ01000076
[OIKJ] human gut metagenome; human gut
424
497
+
Thr
CGT
[ENA]
¢þ
>WENV182443076
OIKJ01000364
[OIKJ] human gut metagenome; human gut
426
352
-
Arg
CCT
[ENA]
¢þ
>WENV182443164
OIKJ01008233
[OIKJ] human gut metagenome; human gut
434
359
-
Lys
CTT
[ENA]
¢þ
>WENV182443152
OIKJ01005889
[OIKJ] human gut metagenome; human gut
462
538
+
Arg
TCT
[ENA]
¢þ
>WENV182443098
OIKJ01001477
[OIKJ] human gut metagenome; human gut
476
552
+
Arg
CCG
[ENA]
¢þ
>WENV182443140
OIKJ01003973
[OIKJ] human gut metagenome; human gut
483
411
-
Thr
TGT
[ENA]
¢þ
>WENV182443131
OIKJ01003667
[OIKJ] human gut metagenome; human gut
501
415
-
Leu
GAG
[ENA]
¢þ
>WENV182443146
OIKJ01004340
[OIKJ] human gut metagenome; human gut
512
436
-
Arg
CCG
[ENA]
¢þ
>WENV182443114
OIKJ01002011
[OIKJ] human gut metagenome; human gut
514
438
-
Met
CAT
[ENA]
¢þ
>WENV182443080
OIKJ01000504
[OIKJ] human gut metagenome; human gut
524
605
+
Leu
TAG
[ENA]
¢þ
>WENV182443150
OIKJ01005772
[OIKJ] human gut metagenome; human gut
544
619
+
Arg
TCT
[ENA]
¢þ
>WENV182443160
OIKJ01007019
[OIKJ] human gut metagenome; human gut
555
479
-
Ile
GAT
[ENA]
¢þ
>WENV182443139
OIKJ01003973
[OIKJ] human gut metagenome; human gut
560
489
-
Glu
TTC
[ENA]
¢þ
>WENV182443092
OIKJ01001072
[OIKJ] human gut metagenome; human gut
600
526
-
Gly
TCC
[ENA]
¢þ
>WENV182443147
OIKJ01004421
[OIKJ] human gut metagenome; human gut
606
693
+
Ser
GCT
[ENA]
¢þ
>WENV182443095
OIKJ01001194
[OIKJ] human gut metagenome; human gut
609
685
+
fMet
CAT
[ENA]
¢þ
>WENV182443102
OIKJ01001562
[OIKJ] human gut metagenome; human gut
638
713
+
Ile2
CAT
[ENA]
¢þ
>WENV182443145
OIKJ01004153
[OIKJ] human gut metagenome; human gut
671
576
-
SeC
TCA
[ENA]
¢þ
>WENV182443137
OIKJ01003861
[OIKJ] human gut metagenome; human gut
691
618
-
Ala
TGC
[ENA]
¢þ
>WENV182443075
OIKJ01000321
[OIKJ] human gut metagenome; human gut
750
675
-
Trp
CCA
[ENA]
¢þ
>WENV182443124
OIKJ01003100
[OIKJ] human gut metagenome; human gut
752
822
+
Gly
TCC
[ENA]
¢þ
>WENV182443085
OIKJ01000784
[OIKJ] human gut metagenome; human gut
786
864
+
Arg
CCT
[ENA]
¢þ
>WENV182443081
OIKJ01000504
[OIKJ] human gut metagenome; human gut
801
719
-
Leu
GAG
[ENA]
¢þ
>WENV182443123
OIKJ01002951
[OIKJ] human gut metagenome; human gut
832
757
-
Thr
GGT
[ENA]
¢þ
>WENV182443074
OIKJ01000321
[OIKJ] human gut metagenome; human gut
835
759
-
Asp
GTC
[ENA]
¢þ
>WENV182443109
OIKJ01001819
[OIKJ] human gut metagenome; human gut
842
917
+
Thr
CGT
[ENA]
¢þ
>WENV182443136
OIKJ01003861
[OIKJ] human gut metagenome; human gut
859
785
-
Ile
GAT
[ENA]
¢þ
>WENV182443052
OIKJ01000068
[OIKJ] human gut metagenome; human gut
871
944
+
Trp
CCA
[ENA]
¢þ
>WENV182443122
OIKJ01002951
[OIKJ] human gut metagenome; human gut
913
839
-
Gly
TCC
[ENA]
¢þ
>WENV182443112
OIKJ01001933
[OIKJ] human gut metagenome; human gut
938
1011
+
Ala
TGC
[ENA]
¢þ
>WENV182443094
OIKJ01001176
[OIKJ] human gut metagenome; human gut
980
905
-
Phe
GAA
[ENA]
¢þ
>WENV182443121
OIKJ01002730
[OIKJ] human gut metagenome; human gut
1013
1090
+
Pro
TGG
[ENA]
¢þ
>WENV182443119
OIKJ01002482
[OIKJ] human gut metagenome; human gut
1097
1010
-
Ser
GGA
[ENA]
¢þ
>WENV182443118
OIKJ01002323
[OIKJ] human gut metagenome; human gut
1107
1031
-
Val
GAC
[ENA]
¢þ
>WENV182443083
OIKJ01000696
[OIKJ] human gut metagenome; human gut
1176
1103
-
Gly
CCC
[ENA]
¢þ
>WENV182443035
OIKJ01000029
[OIKJ] human gut metagenome; human gut
1180
1252
+
Glu
TTC
[ENA]
¢þ
>WENV182443116
OIKJ01002159
[OIKJ] human gut metagenome; human gut
1180
1265
+
Tyr
GTA
[ENA]
¢þ
>WENV182443117
OIKJ01002323
[OIKJ] human gut metagenome; human gut
1188
1112
-
Val
GAC
[ENA]
¢þ
>WENV182443101
OIKJ01001522
[OIKJ] human gut metagenome; human gut
1219
1294
+
Thr
CGT
[ENA]
¢þ
>WENV182443084
OIKJ01000751
[OIKJ] human gut metagenome; human gut
1254
1329
+
Trp
CCA
[ENA]
¢þ
>WENV182443108
OIKJ01001736
[OIKJ] human gut metagenome; human gut
1301
1385
+
Leu
CAA
[ENA]
¢þ
>WENV182443113
OIKJ01001933
[OIKJ] human gut metagenome; human gut
1340
1267
-
Asn
GTT
[ENA]
¢þ
>WENV182443096
OIKJ01001425
[OIKJ] human gut metagenome; human gut
1358
1283
-
Asn
GTT
[ENA]
¢þ
>WENV182443087
OIKJ01000831
[OIKJ] human gut metagenome; human gut
1365
1438
+
Gln
CTG
[ENA]
¢þ
>WENV182443060
OIKJ01000116
[OIKJ] human gut metagenome; human gut
1372
1299
-
Ile2
CAT
[ENA]
¢þ
>WENV182443093
OIKJ01001109
[OIKJ] human gut metagenome; human gut
1384
1475
+
Ser
GGA
[ENA]
¢þ
>WENV182443104
OIKJ01001584
[OIKJ] human gut metagenome; human gut
1413
1499
+
Leu
CAG
[ENA]
¢þ
>WENV182443088
OIKJ01000831
[OIKJ] human gut metagenome; human gut
1472
1547
+
Pro
CGG
[ENA]
¢þ
>WENV182443089
OIKJ01000857
[OIKJ] human gut metagenome; human gut
1474
1403
-
Gln
TTG
[ENA]
¢þ
>WENV182443097
OIKJ01001470
[OIKJ] human gut metagenome; human gut
1511
1595
+
Leu
CAA
[ENA]
¢þ
>WENV182443070
OIKJ01000267
[OIKJ] human gut metagenome; human gut
1529
1453
-
Asn
GTT
[ENA]
¢þ
>WENV182443090
OIKJ01000883
[OIKJ] human gut metagenome; human gut
1640
1726
+
Leu
CAG
[ENA]
¢þ
>WENV182443069
OIKJ01000267
[OIKJ] human gut metagenome; human gut
1645
1571
-
Glu
CTC
[ENA]
¢þ
>WENV182443056
OIKJ01000081
[OIKJ] human gut metagenome; human gut
1736
1663
-
Gly
CCC
[ENA]
¢þ
>WENV182443068
OIKJ01000259
[OIKJ] human gut metagenome; human gut
2048
1954
-
SeC
TCA
[ENA]
¢þ
>WENV182443079
OIKJ01000419
[OIKJ] human gut metagenome; human gut
2210
2283
+
Ala
CGC
[ENA]
¢þ
>WENV182443082
OIKJ01000666
[OIKJ] human gut metagenome; human gut
2324
2398
+
Thr
TGT
[ENA]
¢þ
>WENV182443072
OIKJ01000302
[OIKJ] human gut metagenome; human gut
3449
3374
-
Pro
TGG
[ENA]
¢þ
>WENV182443077
OIKJ01000377
[OIKJ] human gut metagenome; human gut
3557
3632
+
Trp
CCA
[ENA]
¢þ
>WENV182443071
OIKJ01000296
[OIKJ] human gut metagenome; human gut
3582
3665
+
Leu
TAA
[ENA]
¢þ
>WENV182443078
OIKJ01000377
[OIKJ] human gut metagenome; human gut
3917
3991
+
Asp
GTC
[ENA]
¢þ
>WENV182443073
OIKJ01000321
[OIKJ] human gut metagenome; human gut
4280
4205
-
Glu
TTC
[ENA]
¢þ
>WENV182443059
OIKJ01000106
[OIKJ] human gut metagenome; human gut
4615
4700
+
Ser
TGA
[ENA]
¢þ
>WENV182443065
OIKJ01000193
[OIKJ] human gut metagenome; human gut
5331
5256
-
Gly
CCC
[ENA]
¢þ
>WENV182443066
OIKJ01000203
[OIKJ] human gut metagenome; human gut
5528
5449
-
Leu
CAA
[ENA]
¢þ
>WENV182443067
OIKJ01000234
[OIKJ] human gut metagenome; human gut
5577
5651
+
Arg
TCT
[ENA]
¢þ
>WENV182443055
OIKJ01000078
[OIKJ] human gut metagenome; human gut
6567
6482
-
Ser
TGA
[ENA]
¢þ
>WENV182443057
OIKJ01000083
[OIKJ] human gut metagenome; human gut
7606
7681
+
His
GTG
[ENA]
¢þ
>WENV182443063
OIKJ01000136
[OIKJ] human gut metagenome; human gut
8043
8130
+
Ser
TGA
[ENA]
¢þ
>WENV182443064
OIKJ01000136
[OIKJ] human gut metagenome; human gut
8163
8256
+
Ser
GCT
[ENA]
¢þ
>WENV182443062
OIKJ01000133
[OIKJ] human gut metagenome; human gut
8942
8866
-
Val
TAC
[ENA]
¢þ
>WENV182443058
OIKJ01000103
[OIKJ] human gut metagenome; human gut
10320
10410
+
Ser
CGA
[ENA]
¢þ
>WENV182443042
OIKJ01000032
[OIKJ] human gut metagenome; human gut
11327
11254
-
Trp
CCA
[ENA]
¢þ
>WENV182443053
OIKJ01000072
[OIKJ] human gut metagenome; human gut
12163
12088
-
Phe
GAA
[ENA]
¢þ
>WENV182443051
OIKJ01000058
[OIKJ] human gut metagenome; human gut
12331
12243
-
Ser
GGA
[ENA]
¢þ
>WENV182443041
OIKJ01000032
[OIKJ] human gut metagenome; human gut
12692
12620
-
Thr
GGT
[ENA]
¢þ
>WENV182443040
OIKJ01000032
[OIKJ] human gut metagenome; human gut
12893
12810
-
Tyr
GTA
[ENA]
¢þ
>WENV182443039
OIKJ01000032
[OIKJ] human gut metagenome; human gut
13010
12936
-
Thr
TGT
[ENA]
¢þ
>WENV182443030
OIKJ01000016
[OIKJ] human gut metagenome; human gut
13070
12988
-
Leu
TAG
[ENA]
¢þ
>WENV182443026
OIKJ01000012
[OIKJ] human gut metagenome; human gut
21204
21278
+
Ile2
CAT
[ENA]
¢þ
>WENV182443045
OIKJ01000045
[OIKJ] human gut metagenome; human gut
22706
22631
-
Pro
TGG
[ENA]
¢þ
>WENV182443029
OIKJ01000014
[OIKJ] human gut metagenome; human gut
25925
25997
+
Arg
CCT
[ENA]
¢þ
>WENV182443037
OIKJ01000032
[OIKJ] human gut metagenome; human gut
26117
26191
+
Asn
GTT
[ENA]
¢þ
>WENV182443038
OIKJ01000032
[OIKJ] human gut metagenome; human gut
26216
26290
+
Asn
GTT
[ENA]
¢þ
>WENV182443050
OIKJ01000054
[OIKJ] human gut metagenome; human gut
30266
30340
+
Asp
GTC
[ENA]
¢þ
>WENV182443047
OIKJ01000049
[OIKJ] human gut metagenome; human gut
33369
33442
+
Gly
GCC
[ENA]
¢þ
>WENV182443048
OIKJ01000049
[OIKJ] human gut metagenome; human gut
33489
33570
+
Leu
CAG
[ENA]
¢þ
>WENV182443049
OIKJ01000049
[OIKJ] human gut metagenome; human gut
33593
33677
+
Leu
GAG
[ENA]
¢þ
>WENV182443043
OIKJ01000039
[OIKJ] human gut metagenome; human gut
35031
35102
+
Gln
CTG
[ENA]
¢þ
>WENV182443028
OIKJ01000013
[OIKJ] human gut metagenome; human gut
36998
36915
-
Tyr
GTA
[ENA]
¢þ
>WENV182443020
OIKJ01000007
[OIKJ] human gut metagenome; human gut
41114
41187
+
Lys
CTT
[ENA]
¢þ
>WENV182443021
OIKJ01000007
[OIKJ] human gut metagenome; human gut
41211
41284
+
Lys
CTT
[ENA]
¢þ
>WENV182443022
OIKJ01000007
[OIKJ] human gut metagenome; human gut
41304
41377
+
Lys
CTT
[ENA]
¢þ
>WENV182443034
OIKJ01000028
[OIKJ] human gut metagenome; human gut
42179
42254
+
Lys
TTT
[ENA]
¢þ
>WENV182443032
OIKJ01000024
[OIKJ] human gut metagenome; human gut
42733
42659
-
Glu
TTC
[ENA]
¢þ
>WENV182443027
OIKJ01000013
[OIKJ] human gut metagenome; human gut
51654
51728
+
Thr
TGT
[ENA]
¢þ
>WENV182443036
OIKJ01000030
[OIKJ] human gut metagenome; human gut
54838
54912
+
Cys
GCA
[ENA]
¢þ
>WENV182443031
OIKJ01000017
[OIKJ] human gut metagenome; human gut
74936
74848
-
Ser
GGA
[ENA]
¢þ
>WENV182443023
OIKJ01000007
[OIKJ] human gut metagenome; human gut
84637
84563
-
Ala
GGC
[ENA]
¢þ
>WENV182443019
OIKJ01000006
[OIKJ] human gut metagenome; human gut
87462
87533
+
Gln
TTG
[ENA]
¢þ
>WENV182443025
OIKJ01000009
[OIKJ] human gut metagenome; human gut
100590
100515
-
Phe
GAA
[ENA]
¢þ
>WENV182443024
OIKJ01000009
[OIKJ] human gut metagenome; human gut
100771
100844
+
Pro
CGG
[ENA]
¢þ
>WENV182443017
OIKJ01000001
[OIKJ] human gut metagenome; human gut
158055
157983
-
Arg
CCG
[ENA]
¢þ
>WENV182443016
OIKJ01000001
[OIKJ] human gut metagenome; human gut
320525
320451
-
Met
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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