This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIMC] human gut metagenome; human gut
HIT:
151 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182452190
OIMC01002697
[OIMC] human gut metagenome; human gut
11
86
+
Val
GAC
[ENA]
¢þ
>WENV182452161
OIMC01000454
[OIMC] human gut metagenome; human gut
40
126
+
Leu
CAG
[ENA]
¢þ
>WENV182452222
OIMC01009599
[OIMC] human gut metagenome; human gut
49
120
+
Gln
TTG
[ENA]
¢þ
>WENV182452202
OIMC01006729
[OIMC] human gut metagenome; human gut
59
134
+
Thr
GGT
[ENA]
¢þ
>WENV182452167
OIMC01000624
[OIMC] human gut metagenome; human gut
61
133
+
Thr
GGT
[ENA]
¢þ
>WENV182452158
OIMC01000431
[OIMC] human gut metagenome; human gut
62
149
+
Ser
GCT
[ENA]
¢þ
>WENV182452164
OIMC01000586
[OIMC] human gut metagenome; human gut
66
150
+
Leu
TAA
[ENA]
¢þ
>WENV182452205
OIMC01006951
[OIMC] human gut metagenome; human gut
85
157
+
Cys
GCA
[ENA]
¢þ
>WENV182452221
OIMC01009476
[OIMC] human gut metagenome; human gut
91
167
+
Arg
CCT
[ENA]
¢þ
>WENV182452220
OIMC01009108
[OIMC] human gut metagenome; human gut
96
182
+
Ser
TGA
[ENA]
¢þ
>WENV182452187
OIMC01002078
[OIMC] human gut metagenome; human gut
103
18
-
Tyr
GTA
[ENA]
¢þ
>WENV182452143
OIMC01000222
[OIMC] human gut metagenome; human gut
106
30
-
Val
CAC
[ENA]
¢þ
>WENV182452127
OIMC01000131
[OIMC] human gut metagenome; human gut
112
27
-
Ser
TGA
[ENA]
¢þ
>WENV182452106
OIMC01000030
[OIMC] human gut metagenome; human gut
112
27
-
Ser
TGA
[ENA]
¢þ
>WENV182452196
OIMC01004041
[OIMC] human gut metagenome; human gut
114
190
+
Ile
GAT
[ENA]
¢þ
>WENV182452225
OIMC01009804
[OIMC] human gut metagenome; human gut
119
191
+
Gly
GCC
[ENA]
¢þ
>WENV182452213
OIMC01007555
[OIMC] human gut metagenome; human gut
120
46
-
Gly
CCC
[ENA]
¢þ
>WENV182452176
OIMC01000976
[OIMC] human gut metagenome; human gut
121
33
-
Leu
TAA
[ENA]
¢þ
>WENV182452200
OIMC01004945
[OIMC] human gut metagenome; human gut
139
213
+
Ala
GGC
[ENA]
¢þ
>WENV182452223
OIMC01009781
[OIMC] human gut metagenome; human gut
145
220
+
Ala
TGC
[ENA]
¢þ
>WENV182452142
OIMC01000213
[OIMC] human gut metagenome; human gut
147
73
-
Asp
GTC
[ENA]
¢þ
>WENV182452210
OIMC01007283
[OIMC] human gut metagenome; human gut
174
249
+
Ala
TGC
[ENA]
¢þ
>WENV182452197
OIMC01004041
[OIMC] human gut metagenome; human gut
198
273
+
Ala
TGC
[ENA]
¢þ
>WENV182452159
OIMC01000431
[OIMC] human gut metagenome; human gut
217
289
+
Glu
CTC
[ENA]
¢þ
>WENV182452224
OIMC01009781
[OIMC] human gut metagenome; human gut
225
301
+
Ile
GAT
[ENA]
¢þ
>WENV182452229
OIMC01010168
[OIMC] human gut metagenome; human gut
235
151
-
Leu
TAA
[ENA]
¢þ
>WENV182452130
OIMC01000147
[OIMC] human gut metagenome; human gut
237
166
-
Gln
CTG
[ENA]
¢þ
>WENV182452211
OIMC01007283
[OIMC] human gut metagenome; human gut
253
329
+
Ile
GAT
[ENA]
¢þ
>WENV182452209
OIMC01007252
[OIMC] human gut metagenome; human gut
254
182
-
Gln
CTG
[ENA]
¢þ
>WENV182452219
OIMC01009002
[OIMC] human gut metagenome; human gut
263
182
-
Leu
TAG
[ENA]
¢þ
>WENV182452204
OIMC01006934
[OIMC] human gut metagenome; human gut
288
214
-
Ala
TGC
[ENA]
¢þ
>WENV182452230
OIMC01010515
[OIMC] human gut metagenome; human gut
343
270
-
Arg
CCG
[ENA]
¢þ
>WENV182452228
OIMC01010168
[OIMC] human gut metagenome; human gut
345
272
-
Val
TAC
[ENA]
¢þ
>WENV182452111
OIMC01000042
[OIMC] human gut metagenome; human gut
345
272
-
fMet
CAT
[ENA]
¢þ
>WENV182452201
OIMC01005697
[OIMC] human gut metagenome; human gut
361
287
-
Pro
CGG
[ENA]
¢þ
>WENV182452199
OIMC01004556
[OIMC] human gut metagenome; human gut
369
441
+
Arg
CCT
[ENA]
¢þ
>WENV182452207
OIMC01007064
[OIMC] human gut metagenome; human gut
375
301
-
Ile
GAT
[ENA]
¢þ
>WENV182452203
OIMC01006934
[OIMC] human gut metagenome; human gut
393
317
-
Ile
GAT
[ENA]
¢þ
>WENV182452226
OIMC01010074
[OIMC] human gut metagenome; human gut
411
487
+
Asp
GTC
[ENA]
¢þ
>WENV182452217
OIMC01008277
[OIMC] human gut metagenome; human gut
436
362
-
Lys
TTT
[ENA]
¢þ
>WENV182452175
OIMC01000884
[OIMC] human gut metagenome; human gut
452
377
-
Gly
CCC
[ENA]
¢þ
>WENV182452227
OIMC01010168
[OIMC] human gut metagenome; human gut
452
378
-
Asp
GTC
[ENA]
¢þ
>WENV182452214
OIMC01008036
[OIMC] human gut metagenome; human gut
491
565
+
His
GTG
[ENA]
¢þ
>WENV182452216
OIMC01008277
[OIMC] human gut metagenome; human gut
517
443
-
Phe
GAA
[ENA]
¢þ
>WENV182452206
OIMC01007046
[OIMC] human gut metagenome; human gut
546
621
+
Lys
CTT
[ENA]
¢þ
>WENV182452218
OIMC01008513
[OIMC] human gut metagenome; human gut
553
480
-
Gln
CTG
[ENA]
¢þ
>WENV182452212
OIMC01007362
[OIMC] human gut metagenome; human gut
580
508
-
Glu
CTC
[ENA]
¢þ
>WENV182452193
OIMC01003533
[OIMC] human gut metagenome; human gut
592
667
+
Pro
TGG
[ENA]
¢þ
>WENV182452215
OIMC01008277
[OIMC] human gut metagenome; human gut
595
520
-
fMet
CAT
[ENA]
¢þ
>WENV182452194
OIMC01003727
[OIMC] human gut metagenome; human gut
595
673
+
His
GTG
[ENA]
¢þ
>WENV182452208
OIMC01007185
[OIMC] human gut metagenome; human gut
599
524
-
Lys
CTT
[ENA]
¢þ
>WENV182452198
OIMC01004292
[OIMC] human gut metagenome; human gut
651
576
-
Arg
CCT
[ENA]
¢þ
>WENV182452170
OIMC01000689
[OIMC] human gut metagenome; human gut
722
647
-
Ala
CGC
[ENA]
¢þ
>WENV182452174
OIMC01000878
[OIMC] human gut metagenome; human gut
779
850
+
Gln
TTG
[ENA]
¢þ
>WENV182452177
OIMC01001058
[OIMC] human gut metagenome; human gut
839
913
+
Thr
TGT
[ENA]
¢þ
>WENV182452195
OIMC01003972
[OIMC] human gut metagenome; human gut
843
931
+
Ser
GGA
[ENA]
¢þ
>WENV182452189
OIMC01002446
[OIMC] human gut metagenome; human gut
925
852
-
Lys
TTT
[ENA]
¢þ
>WENV182452188
OIMC01002410
[OIMC] human gut metagenome; human gut
982
1057
+
Thr
CGT
[ENA]
¢þ
>WENV182452172
OIMC01000755
[OIMC] human gut metagenome; human gut
992
919
-
fMet
CAT
[ENA]
¢þ
>WENV182452180
OIMC01001610
[OIMC] human gut metagenome; human gut
1008
935
-
Gly
CCC
[ENA]
¢þ
>WENV182452171
OIMC01000746
[OIMC] human gut metagenome; human gut
1066
993
-
Thr
CGT
[ENA]
¢þ
>WENV182452192
OIMC01003232
[OIMC] human gut metagenome; human gut
1067
1150
+
Leu
TAA
[ENA]
¢þ
>WENV182452152
OIMC01000268
[OIMC] human gut metagenome; human gut
1077
1004
-
Pro
CGG
[ENA]
¢þ
>WENV182452191
OIMC01003194
[OIMC] human gut metagenome; human gut
1114
1041
-
Ala
TGC
[ENA]
¢þ
>WENV182452125
OIMC01000115
[OIMC] human gut metagenome; human gut
1133
1060
-
Trp
CCA
[ENA]
¢þ
>WENV182452151
OIMC01000268
[OIMC] human gut metagenome; human gut
1180
1107
-
Gln
CTG
[ENA]
¢þ
>WENV182452173
OIMC01000759
[OIMC] human gut metagenome; human gut
1311
1387
+
Arg
CCG
[ENA]
¢þ
>WENV182452182
OIMC01001638
[OIMC] human gut metagenome; human gut
1415
1339
-
Ile
GAT
[ENA]
¢þ
>WENV182452168
OIMC01000624
[OIMC] human gut metagenome; human gut
1427
1500
+
Trp
CCA
[ENA]
¢þ
>WENV182452181
OIMC01001638
[OIMC] human gut metagenome; human gut
1494
1419
-
Ala
TGC
[ENA]
¢þ
>WENV182452186
OIMC01001848
[OIMC] human gut metagenome; human gut
1654
1583
-
Gly
GCC
[ENA]
¢þ
>WENV182452179
OIMC01001437
[OIMC] human gut metagenome; human gut
1666
1749
+
Tyr
GTA
[ENA]
¢þ
>WENV182452129
OIMC01000140
[OIMC] human gut metagenome; human gut
1674
1598
-
Arg
ACG
[ENA]
¢þ
>WENV182452185
OIMC01001848
[OIMC] human gut metagenome; human gut
1733
1660
-
Phe
GAA
[ENA]
¢þ
>WENV182452183
OIMC01001841
[OIMC] human gut metagenome; human gut
1742
1668
-
Cys
GCA
[ENA]
¢þ
>WENV182452184
OIMC01001848
[OIMC] human gut metagenome; human gut
1813
1739
-
fMet
CAT
[ENA]
¢þ
>WENV182452137
OIMC01000193
[OIMC] human gut metagenome; human gut
1920
2010
+
Ser
CGA
[ENA]
¢þ
>WENV182452178
OIMC01001135
[OIMC] human gut metagenome; human gut
2406
2332
-
Ile2
CAT
[ENA]
¢þ
>WENV182452124
OIMC01000115
[OIMC] human gut metagenome; human gut
2493
2421
-
Thr
GGT
[ENA]
¢þ
>WENV182452123
OIMC01000115
[OIMC] human gut metagenome; human gut
2592
2509
-
Tyr
GTA
[ENA]
¢þ
>WENV182452122
OIMC01000115
[OIMC] human gut metagenome; human gut
2736
2662
-
Thr
TGT
[ENA]
¢þ
>WENV182452163
OIMC01000565
[OIMC] human gut metagenome; human gut
2973
2899
-
Gly
TCC
[ENA]
¢þ
>WENV182452146
OIMC01000261
[OIMC] human gut metagenome; human gut
3172
3245
+
Lys
TTT
[ENA]
¢þ
>WENV182452147
OIMC01000265
[OIMC] human gut metagenome; human gut
3339
3418
+
Leu
CAA
[ENA]
¢þ
>WENV182452169
OIMC01000648
[OIMC] human gut metagenome; human gut
3393
3468
+
Ala
GGC
[ENA]
¢þ
>WENV182452162
OIMC01000548
[OIMC] human gut metagenome; human gut
3524
3615
+
Ser
GGA
[ENA]
¢þ
>WENV182452156
OIMC01000393
[OIMC] human gut metagenome; human gut
3602
3677
+
Arg
TCT
[ENA]
¢þ
>WENV182452157
OIMC01000393
[OIMC] human gut metagenome; human gut
3685
3761
+
His
GTG
[ENA]
¢þ
>WENV182452144
OIMC01000260
[OIMC] human gut metagenome; human gut
3687
3763
+
Met
CAT
[ENA]
¢þ
>WENV182452145
OIMC01000260
[OIMC] human gut metagenome; human gut
3855
3926
+
Glu
TTC
[ENA]
¢þ
>WENV182452160
OIMC01000441
[OIMC] human gut metagenome; human gut
3915
3841
-
Pro
GGG
[ENA]
¢þ
>WENV182452166
OIMC01000601
[OIMC] human gut metagenome; human gut
3929
3854
-
Gly
GCC
[ENA]
¢þ
>WENV182452165
OIMC01000601
[OIMC] human gut metagenome; human gut
4093
4017
-
Asp
GTC
[ENA]
¢þ
>WENV182452134
OIMC01000181
[OIMC] human gut metagenome; human gut
4565
4639
+
Glu
CTC
[ENA]
¢þ
>WENV182452135
OIMC01000181
[OIMC] human gut metagenome; human gut
4679
4755
+
Asn
GTT
[ENA]
¢þ
>WENV182452148
OIMC01000266
[OIMC] human gut metagenome; human gut
5152
5239
+
Ser
TGA
[ENA]
¢þ
>WENV182452149
OIMC01000266
[OIMC] human gut metagenome; human gut
5272
5365
+
Ser
GCT
[ENA]
¢þ
>WENV182452132
OIMC01000155
[OIMC] human gut metagenome; human gut
5779
5707
-
Cys
GCA
[ENA]
¢þ
>WENV182452155
OIMC01000352
[OIMC] human gut metagenome; human gut
6054
6129
+
Trp
CCA
[ENA]
¢þ
>WENV182452153
OIMC01000293
[OIMC] human gut metagenome; human gut
6167
6091
-
Arg
CCT
[ENA]
¢þ
>WENV182452154
OIMC01000294
[OIMC] human gut metagenome; human gut
6907
6835
-
Glu
TTC
[ENA]
¢þ
>WENV182452139
OIMC01000208
[OIMC] human gut metagenome; human gut
7186
7259
+
Lys
CTT
[ENA]
¢þ
>WENV182452140
OIMC01000208
[OIMC] human gut metagenome; human gut
7284
7357
+
Lys
CTT
[ENA]
¢þ
>WENV182452141
OIMC01000208
[OIMC] human gut metagenome; human gut
7378
7451
+
Lys
CTT
[ENA]
¢þ
>WENV182452150
OIMC01000266
[OIMC] human gut metagenome; human gut
7698
7623
-
Ile2
CAT
[ENA]
¢þ
>WENV182452113
OIMC01000043
[OIMC] human gut metagenome; human gut
10175
10100
-
Pro
TGG
[ENA]
¢þ
>WENV182452120
OIMC01000075
[OIMC] human gut metagenome; human gut
10878
10805
-
Lys
CTT
[ENA]
¢þ
>WENV182452138
OIMC01000200
[OIMC] human gut metagenome; human gut
10900
10984
+
Tyr
GTA
[ENA]
¢þ
>WENV182452133
OIMC01000162
[OIMC] human gut metagenome; human gut
10938
10865
-
Lys
CTT
[ENA]
¢þ
>WENV182452119
OIMC01000075
[OIMC] human gut metagenome; human gut
10966
10894
-
Glu
CTC
[ENA]
¢þ
>WENV182452118
OIMC01000075
[OIMC] human gut metagenome; human gut
11107
11020
-
Ser
GCT
[ENA]
¢þ
>WENV182452136
OIMC01000185
[OIMC] human gut metagenome; human gut
11493
11567
+
Met
CAT
[ENA]
¢þ
>WENV182452131
OIMC01000149
[OIMC] human gut metagenome; human gut
13303
13229
-
Thr
TGT
[ENA]
¢þ
>WENV182452105
OIMC01000030
[OIMC] human gut metagenome; human gut
13739
13812
+
Trp
CCA
[ENA]
¢þ
>WENV182452116
OIMC01000057
[OIMC] human gut metagenome; human gut
15783
15710
-
Phe
GAA
[ENA]
¢þ
>WENV182452128
OIMC01000133
[OIMC] human gut metagenome; human gut
19991
20073
+
Leu
TAG
[ENA]
¢þ
>WENV182452126
OIMC01000120
[OIMC] human gut metagenome; human gut
22452
22378
-
Ile2
CAT
[ENA]
¢þ
>WENV182452117
OIMC01000073
[OIMC] human gut metagenome; human gut
30256
30330
+
Ala
GGC
[ENA]
¢þ
>WENV182452114
OIMC01000044
[OIMC] human gut metagenome; human gut
30364
30435
+
Gln
TTG
[ENA]
¢þ
>WENV182452121
OIMC01000095
[OIMC] human gut metagenome; human gut
30739
30813
+
Ala
GGC
[ENA]
¢þ
>WENV182452092
OIMC01000007
[OIMC] human gut metagenome; human gut
37321
37236
-
Leu
TAA
[ENA]
¢þ
>WENV182452091
OIMC01000007
[OIMC] human gut metagenome; human gut
37410
37337
-
Gly
GCC
[ENA]
¢þ
>WENV182452107
OIMC01000032
[OIMC] human gut metagenome; human gut
40960
40886
-
His
GTG
[ENA]
¢þ
>WENV182452100
OIMC01000018
[OIMC] human gut metagenome; human gut
42774
42849
+
Val
TAC
[ENA]
¢þ
>WENV182452101
OIMC01000018
[OIMC] human gut metagenome; human gut
42883
42960
+
Val
TAC
[ENA]
¢þ
>WENV182452108
OIMC01000037
[OIMC] human gut metagenome; human gut
44763
44836
+
Trp
CCA
[ENA]
¢þ
>WENV182452098
OIMC01000013
[OIMC] human gut metagenome; human gut
49543
49470
-
Pro
CGG
[ENA]
¢þ
>WENV182452097
OIMC01000013
[OIMC] human gut metagenome; human gut
49725
49800
+
Phe
GAA
[ENA]
¢þ
>WENV182452112
OIMC01000043
[OIMC] human gut metagenome; human gut
50928
50855
-
Gly
CCC
[ENA]
¢þ
>WENV182452115
OIMC01000054
[OIMC] human gut metagenome; human gut
55010
55094
+
Leu
CAA
[ENA]
¢þ
>WENV182452110
OIMC01000040
[OIMC] human gut metagenome; human gut
58461
58543
+
Leu
TAG
[ENA]
¢þ
>WENV182452093
OIMC01000008
[OIMC] human gut metagenome; human gut
59378
59452
+
Met
CAT
[ENA]
¢þ
>WENV182452094
OIMC01000008
[OIMC] human gut metagenome; human gut
59513
59587
+
Met
CAT
[ENA]
¢þ
>WENV182452102
OIMC01000018
[OIMC] human gut metagenome; human gut
61757
61684
-
fMet
CAT
[ENA]
¢þ
>WENV182452109
OIMC01000039
[OIMC] human gut metagenome; human gut
62591
62518
-
Phe
GAA
[ENA]
¢þ
>WENV182452099
OIMC01000017
[OIMC] human gut metagenome; human gut
67263
67337
+
Arg
TCT
[ENA]
¢þ
>WENV182452086
OIMC01000003
[OIMC] human gut metagenome; human gut
69187
69099
-
Ser
GGA
[ENA]
¢þ
>WENV182452095
OIMC01000010
[OIMC] human gut metagenome; human gut
77223
77294
+
Gln
TTG
[ENA]
¢þ
>WENV182452081
OIMC01000001
[OIMC] human gut metagenome; human gut
81022
80949
-
Thr
CGT
[ENA]
¢þ
>WENV182452104
OIMC01000021
[OIMC] human gut metagenome; human gut
84474
84400
-
Glu
TTC
[ENA]
¢þ
>WENV182452085
OIMC01000003
[OIMC] human gut metagenome; human gut
93531
93460
-
Gln
CTG
[ENA]
¢þ
>WENV182452087
OIMC01000004
[OIMC] human gut metagenome; human gut
96936
97009
+
Cys
GCA
[ENA]
¢þ
>WENV182452088
OIMC01000004
[OIMC] human gut metagenome; human gut
99534
99621
+
Ser
GCT
[ENA]
¢þ
>WENV182452089
OIMC01000004
[OIMC] human gut metagenome; human gut
99881
99954
+
Glu
CTC
[ENA]
¢þ
>WENV182452103
OIMC01000020
[OIMC] human gut metagenome; human gut
106330
106242
-
Ser
GGA
[ENA]
¢þ
>WENV182452090
OIMC01000007
[OIMC] human gut metagenome; human gut
106489
106561
+
Arg
CCT
[ENA]
¢þ
>WENV182452096
OIMC01000012
[OIMC] human gut metagenome; human gut
116414
116340
-
Ile2
CAT
[ENA]
¢þ
>WENV182452084
OIMC01000003
[OIMC] human gut metagenome; human gut
127320
127395
+
Pro
GGG
[ENA]
¢þ
>WENV182452083
OIMC01000002
[OIMC] human gut metagenome; human gut
130085
130012
-
Lys
TTT
[ENA]
¢þ
>WENV182452082
OIMC01000002
[OIMC] human gut metagenome; human gut
224424
224350
-
Thr
TGT
[ENA]
¢þ
>WENV182452080
OIMC01000001
[OIMC] human gut metagenome; human gut
232953
232881
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK