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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OIMT] human gut metagenome; human gut
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182455771
OIMT01002111
[OIMT] human gut metagenome; human gut
43
119
+
Ile2
CAT
[ENA]
¢þ
>WENV182455822
OIMT01006380
[OIMT] human gut metagenome; human gut
55
144
+
Ser
TGA
[ENA]
¢þ
>WENV182455810
OIMT01005197
[OIMT] human gut metagenome; human gut
77
4
-
Gly
CCC
[ENA]
¢þ
>WENV182455747
OIMT01000502
[OIMT] human gut metagenome; human gut
95
166
+
Gln
CTG
[ENA]
¢þ
>WENV182455812
OIMT01005458
[OIMT] human gut metagenome; human gut
100
172
+
Cys
GCA
[ENA]
¢þ
>WENV182455826
OIMT01006906
[OIMT] human gut metagenome; human gut
122
40
-
Leu
CAA
[ENA]
¢þ
>WENV182455772
OIMT01002161
[OIMT] human gut metagenome; human gut
138
62
-
Met
CAT
[ENA]
¢þ
>WENV182455807
OIMT01004612
[OIMT] human gut metagenome; human gut
138
213
+
Val
GAC
[ENA]
¢þ
>WENV182455805
OIMT01004395
[OIMT] human gut metagenome; human gut
145
70
-
Ala
TGC
[ENA]
¢þ
>WENV182455802
OIMT01004269
[OIMT] human gut metagenome; human gut
147
238
+
Ser
CGA
[ENA]
¢þ
>WENV182455778
OIMT01002370
[OIMT] human gut metagenome; human gut
149
66
-
Leu
CAG
[ENA]
¢þ
>WENV182455794
OIMT01003303
[OIMT] human gut metagenome; human gut
156
247
+
Ser
GCT
[ENA]
¢þ
>WENV182455828
OIMT01007011
[OIMT] human gut metagenome; human gut
157
82
-
Lys
CTT
[ENA]
¢þ
>WENV182455798
OIMT01004054
[OIMT] human gut metagenome; human gut
163
235
+
Glu
TTC
[ENA]
¢þ
>WENV182455803
OIMT01004342
[OIMT] human gut metagenome; human gut
165
240
+
Thr
CGT
[ENA]
¢þ
>WENV182455783
OIMT01002571
[OIMT] human gut metagenome; human gut
168
94
-
Arg
CCG
[ENA]
¢þ
>WENV182455770
OIMT01002066
[OIMT] human gut metagenome; human gut
181
257
+
Val
GAC
[ENA]
¢þ
>WENV182455769
OIMT01001938
[OIMT] human gut metagenome; human gut
187
271
+
Tyr
GTA
[ENA]
¢þ
>WENV182455744
OIMT01000410
[OIMT] human gut metagenome; human gut
193
105
-
Ser
GGA
[ENA]
¢þ
>WENV182455768
OIMT01001877
[OIMT] human gut metagenome; human gut
199
126
-
Phe
GAA
[ENA]
¢þ
>WENV182455814
OIMT01005656
[OIMT] human gut metagenome; human gut
203
291
+
Leu
TAA
[ENA]
¢þ
>WENV182455813
OIMT01005600
[OIMT] human gut metagenome; human gut
215
287
+
Glu
CTC
[ENA]
¢þ
>WENV182455827
OIMT01007011
[OIMT] human gut metagenome; human gut
252
177
-
Lys
TTT
[ENA]
¢þ
>WENV182455831
OIMT01008033
[OIMT] human gut metagenome; human gut
261
333
+
Arg
CCT
[ENA]
¢þ
>WENV182455777
OIMT01002370
[OIMT] human gut metagenome; human gut
269
196
-
Gly
GCC
[ENA]
¢þ
>WENV182455804
OIMT01004395
[OIMT] human gut metagenome; human gut
272
196
-
Ile
GAT
[ENA]
¢þ
>WENV182455818
OIMT01005920
[OIMT] human gut metagenome; human gut
277
351
+
Trp
CCA
[ENA]
¢þ
>WENV182455765
OIMT01001699
[OIMT] human gut metagenome; human gut
292
206
-
Leu
TAG
[ENA]
¢þ
>WENV182455815
OIMT01005656
[OIMT] human gut metagenome; human gut
298
368
+
Gly
TCC
[ENA]
¢þ
>WENV182455750
OIMT01000791
[OIMT] human gut metagenome; human gut
303
230
-
Lys
TTT
[ENA]
¢þ
>WENV182455788
OIMT01002811
[OIMT] human gut metagenome; human gut
307
394
+
Ser
TGA
[ENA]
¢þ
>WENV182455821
OIMT01006044
[OIMT] human gut metagenome; human gut
310
385
+
Thr
GGT
[ENA]
¢þ
>WENV182455796
OIMT01003555
[OIMT] human gut metagenome; human gut
319
232
-
Ser
GCT
[ENA]
¢þ
>WENV182455824
OIMT01006567
[OIMT] human gut metagenome; human gut
342
417
+
Pro
GGG
[ENA]
¢þ
>WENV182455753
OIMT01001174
[OIMT] human gut metagenome; human gut
377
306
-
Gln
TTG
[ENA]
¢þ
>WENV182455790
OIMT01002948
[OIMT] human gut metagenome; human gut
387
462
+
Thr
TGT
[ENA]
¢þ
>WENV182455797
OIMT01003811
[OIMT] human gut metagenome; human gut
389
299
-
Ser
GGA
[ENA]
¢þ
>WENV182455819
OIMT01005920
[OIMT] human gut metagenome; human gut
400
475
+
Asp
GTC
[ENA]
¢þ
>WENV182455756
OIMT01001445
[OIMT] human gut metagenome; human gut
405
331
-
Ala
GGC
[ENA]
¢þ
>WENV182455816
OIMT01005656
[OIMT] human gut metagenome; human gut
408
484
+
Arg
TCT
[ENA]
¢þ
>WENV182455743
OIMT01000392
[OIMT] human gut metagenome; human gut
415
341
-
Glu
TTC
[ENA]
¢þ
>WENV182455784
OIMT01002644
[OIMT] human gut metagenome; human gut
416
501
+
Tyr
GTA
[ENA]
¢þ
>WENV182455808
OIMT01005143
[OIMT] human gut metagenome; human gut
428
502
+
Glu
CTC
[ENA]
¢þ
>WENV182455801
OIMT01004190
[OIMT] human gut metagenome; human gut
432
518
+
Leu
CAG
[ENA]
¢þ
>WENV182455829
OIMT01007029
[OIMT] human gut metagenome; human gut
442
364
-
Arg
CCT
[ENA]
¢þ
>WENV182455830
OIMT01007603
[OIMT] human gut metagenome; human gut
455
380
-
Ala
CGC
[ENA]
¢þ
>WENV182455791
OIMT01002976
[OIMT] human gut metagenome; human gut
458
376
-
Leu
TAG
[ENA]
¢þ
>WENV182455820
OIMT01005920
[OIMT] human gut metagenome; human gut
480
554
+
Val
TAC
[ENA]
¢þ
>WENV182455823
OIMT01006550
[OIMT] human gut metagenome; human gut
491
415
-
Met
CAT
[ENA]
¢þ
>WENV182455817
OIMT01005656
[OIMT] human gut metagenome; human gut
493
570
+
Ile2
CAT
[ENA]
¢þ
>WENV182455825
OIMT01006691
[OIMT] human gut metagenome; human gut
498
574
+
Arg
CCT
[ENA]
¢þ
>WENV182455789
OIMT01002904
[OIMT] human gut metagenome; human gut
510
426
-
Leu
CAA
[ENA]
¢þ
>WENV182455795
OIMT01003303
[OIMT] human gut metagenome; human gut
513
439
-
Gly
TCC
[ENA]
¢þ
>WENV182455792
OIMT01002998
[OIMT] human gut metagenome; human gut
521
597
+
Ile2
CAT
[ENA]
¢þ
>WENV182455800
OIMT01004184
[OIMT] human gut metagenome; human gut
540
468
-
Thr
TGT
[ENA]
¢þ
>WENV182455809
OIMT01005143
[OIMT] human gut metagenome; human gut
543
619
+
Asn
GTT
[ENA]
¢þ
>WENV182455774
OIMT01002259
[OIMT] human gut metagenome; human gut
579
654
+
Gly
GCC
[ENA]
¢þ
>WENV182455785
OIMT01002644
[OIMT] human gut metagenome; human gut
602
676
+
Thr
GGT
[ENA]
¢þ
>WENV182455766
OIMT01001774
[OIMT] human gut metagenome; human gut
605
676
+
Gln
TTG
[ENA]
¢þ
>WENV182455793
OIMT01003037
[OIMT] human gut metagenome; human gut
610
683
+
Lys
CTT
[ENA]
¢þ
>WENV182455806
OIMT01004467
[OIMT] human gut metagenome; human gut
610
686
+
Asp
GTC
[ENA]
¢þ
>WENV182455811
OIMT01005230
[OIMT] human gut metagenome; human gut
647
572
-
His
GTG
[ENA]
¢þ
>WENV182455781
OIMT01002571
[OIMT] human gut metagenome; human gut
676
750
+
Glu
TTC
[ENA]
¢þ
>WENV182455758
OIMT01001550
[OIMT] human gut metagenome; human gut
688
616
-
Thr
GGT
[ENA]
¢þ
>WENV182455799
OIMT01004096
[OIMT] human gut metagenome; human gut
703
776
+
fMet
CAT
[ENA]
¢þ
>WENV182455754
OIMT01001278
[OIMT] human gut metagenome; human gut
707
791
+
Leu
GAG
[ENA]
¢þ
>WENV182455775
OIMT01002259
[OIMT] human gut metagenome; human gut
712
802
+
Leu
TAA
[ENA]
¢þ
>WENV182455780
OIMT01002406
[OIMT] human gut metagenome; human gut
716
789
+
Gly
CCC
[ENA]
¢þ
>WENV182455767
OIMT01001875
[OIMT] human gut metagenome; human gut
717
802
+
Ser
TGA
[ENA]
¢þ
>WENV182455786
OIMT01002697
[OIMT] human gut metagenome; human gut
730
657
-
Pro
CGG
[ENA]
¢þ
>WENV182455759
OIMT01001588
[OIMT] human gut metagenome; human gut
738
811
+
Trp
CCA
[ENA]
¢þ
>WENV182455782
OIMT01002571
[OIMT] human gut metagenome; human gut
754
829
+
Val
TAC
[ENA]
¢þ
>WENV182455787
OIMT01002751
[OIMT] human gut metagenome; human gut
780
705
-
Lys
TTT
[ENA]
¢þ
>WENV182455755
OIMT01001278
[OIMT] human gut metagenome; human gut
798
875
+
Gln
CTG
[ENA]
¢þ
>WENV182455764
OIMT01001597
[OIMT] human gut metagenome; human gut
801
717
-
Leu
CAG
[ENA]
¢þ
>WENV182455749
OIMT01000721
[OIMT] human gut metagenome; human gut
839
757
-
Leu
TAG
[ENA]
¢þ
>WENV182455757
OIMT01001550
[OIMT] human gut metagenome; human gut
869
786
-
Tyr
GTA
[ENA]
¢þ
>WENV182455776
OIMT01002338
[OIMT] human gut metagenome; human gut
885
811
-
Pro
TGG
[ENA]
¢þ
>WENV182455763
OIMT01001597
[OIMT] human gut metagenome; human gut
916
831
-
Leu
GAG
[ENA]
¢þ
>WENV182455779
OIMT01002384
[OIMT] human gut metagenome; human gut
949
876
-
Pro
CGG
[ENA]
¢þ
>WENV182455752
OIMT01000890
[OIMT] human gut metagenome; human gut
996
1068
+
Gly
GCC
[ENA]
¢þ
>WENV182455762
OIMT01001597
[OIMT] human gut metagenome; human gut
997
922
-
Phe
GAA
[ENA]
¢þ
>WENV182455773
OIMT01002167
[OIMT] human gut metagenome; human gut
1032
959
-
Lys
CTT
[ENA]
¢þ
>WENV182455761
OIMT01001597
[OIMT] human gut metagenome; human gut
1081
1005
-
Asp
GTC
[ENA]
¢þ
>WENV182455760
OIMT01001593
[OIMT] human gut metagenome; human gut
1350
1276
-
Ala
TGC
[ENA]
¢þ
>WENV182455739
OIMT01000181
[OIMT] human gut metagenome; human gut
1393
1469
+
Val
TAC
[ENA]
¢þ
>WENV182455748
OIMT01000626
[OIMT] human gut metagenome; human gut
1476
1550
+
Ile2
CAT
[ENA]
¢þ
>WENV182455741
OIMT01000251
[OIMT] human gut metagenome; human gut
1721
1795
+
Thr
TGT
[ENA]
¢þ
>WENV182455742
OIMT01000251
[OIMT] human gut metagenome; human gut
1838
1921
+
Tyr
GTA
[ENA]
¢þ
>WENV182455751
OIMT01000835
[OIMT] human gut metagenome; human gut
1958
1882
-
Ala
TGC
[ENA]
¢þ
>WENV182455738
OIMT01000171
[OIMT] human gut metagenome; human gut
2277
2204
-
Trp
CCA
[ENA]
¢þ
>WENV182455736
OIMT01000076
[OIMT] human gut metagenome; human gut
2315
2391
+
Ile
GAT
[ENA]
¢þ
>WENV182455746
OIMT01000495
[OIMT] human gut metagenome; human gut
2749
2665
-
Leu
CAA
[ENA]
¢þ
>WENV182455737
OIMT01000112
[OIMT] human gut metagenome; human gut
2905
2979
+
Asn
GTT
[ENA]
¢þ
>WENV182455745
OIMT01000423
[OIMT] human gut metagenome; human gut
2923
2995
+
Cys
GCA
[ENA]
¢þ
>WENV182455740
OIMT01000200
[OIMT] human gut metagenome; human gut
3704
3632
-
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK