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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OIMY] human gut metagenome; human gut
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182456380
OIMY01000059
[OIMY] human gut metagenome; human gut
7
81
+
Arg
TCT
[ENA]
¢þ
>WENV182456443
OIMY01002292
[OIMY] human gut metagenome; human gut
8
81
+
Lys
TTT
[ENA]
¢þ
>WENV182456482
OIMY01010409
[OIMY] human gut metagenome; human gut
57
131
+
fMet
CAT
[ENA]
¢þ
>WENV182456432
OIMY01001207
[OIMY] human gut metagenome; human gut
62
134
+
Thr
GGT
[ENA]
¢þ
>WENV182456452
OIMY01003025
[OIMY] human gut metagenome; human gut
80
5
-
Ala
CGC
[ENA]
¢þ
>WENV182456474
OIMY01008693
[OIMY] human gut metagenome; human gut
92
18
-
His
GTG
[ENA]
¢þ
>WENV182456429
OIMY01001023
[OIMY] human gut metagenome; human gut
117
193
+
Arg
CCT
[ENA]
¢þ
>WENV182456445
OIMY01002466
[OIMY] human gut metagenome; human gut
122
51
-
Gln
TTG
[ENA]
¢þ
>WENV182456442
OIMY01002214
[OIMY] human gut metagenome; human gut
125
51
-
Arg
TCT
[ENA]
¢þ
>WENV182456481
OIMY01010404
[OIMY] human gut metagenome; human gut
149
73
-
Asp
GTC
[ENA]
¢þ
>WENV182456477
OIMY01009044
[OIMY] human gut metagenome; human gut
154
79
-
Ala
CGC
[ENA]
¢þ
>WENV182456466
OIMY01004216
[OIMY] human gut metagenome; human gut
159
86
-
Gln
TTG
[ENA]
¢þ
>WENV182456468
OIMY01006253
[OIMY] human gut metagenome; human gut
196
271
+
Ala
TGC
[ENA]
¢þ
>WENV182456437
OIMY01001413
[OIMY] human gut metagenome; human gut
205
279
+
Thr
TGT
[ENA]
¢þ
>WENV182456465
OIMY01004216
[OIMY] human gut metagenome; human gut
257
183
-
His
GTG
[ENA]
¢þ
>WENV182456469
OIMY01006253
[OIMY] human gut metagenome; human gut
275
351
+
Ile
GAT
[ENA]
¢þ
>WENV182456462
OIMY01003790
[OIMY] human gut metagenome; human gut
281
356
+
Arg
CCT
[ENA]
¢þ
>WENV182456480
OIMY01009280
[OIMY] human gut metagenome; human gut
289
218
-
Glu
CTC
[ENA]
¢þ
>WENV182456404
OIMY01000205
[OIMY] human gut metagenome; human gut
294
219
-
Thr
GGT
[ENA]
¢þ
>WENV182456476
OIMY01008738
[OIMY] human gut metagenome; human gut
327
255
-
Gly
GCC
[ENA]
¢þ
>WENV182456431
OIMY01001141
[OIMY] human gut metagenome; human gut
328
249
-
Leu
CAA
[ENA]
¢þ
>WENV182456464
OIMY01004216
[OIMY] human gut metagenome; human gut
365
290
-
Arg
TCT
[ENA]
¢þ
>WENV182456461
OIMY01003744
[OIMY] human gut metagenome; human gut
368
283
-
Leu
TAA
[ENA]
¢þ
>WENV182456479
OIMY01009280
[OIMY] human gut metagenome; human gut
368
293
-
Pro
CGG
[ENA]
¢þ
>WENV182456403
OIMY01000205
[OIMY] human gut metagenome; human gut
374
298
-
Asp
GTC
[ENA]
¢þ
>WENV182456447
OIMY01002896
[OIMY] human gut metagenome; human gut
409
484
+
Asn
GTT
[ENA]
¢þ
>WENV182456475
OIMY01008738
[OIMY] human gut metagenome; human gut
415
341
-
Pro
TGG
[ENA]
¢þ
>WENV182456463
OIMY01004216
[OIMY] human gut metagenome; human gut
437
367
-
Gly
TCC
[ENA]
¢þ
>WENV182456473
OIMY01008237
[OIMY] human gut metagenome; human gut
445
371
-
Glu
CTC
[ENA]
¢þ
>WENV182456441
OIMY01001889
[OIMY] human gut metagenome; human gut
475
384
-
Ser
GGA
[ENA]
¢þ
>WENV182456460
OIMY01003744
[OIMY] human gut metagenome; human gut
478
404
-
Val
TAC
[ENA]
¢þ
>WENV182456444
OIMY01002335
[OIMY] human gut metagenome; human gut
482
401
-
Leu
TAG
[ENA]
¢þ
>WENV182456478
OIMY01009280
[OIMY] human gut metagenome; human gut
492
420
-
Gln
CTG
[ENA]
¢þ
>WENV182456472
OIMY01008208
[OIMY] human gut metagenome; human gut
547
475
-
Glu
CTC
[ENA]
¢þ
>WENV182456471
OIMY01007645
[OIMY] human gut metagenome; human gut
554
478
-
Pro
GGG
[ENA]
¢þ
>WENV182456459
OIMY01003744
[OIMY] human gut metagenome; human gut
587
512
-
Asp
GTC
[ENA]
¢þ
>WENV182456402
OIMY01000205
[OIMY] human gut metagenome; human gut
626
551
-
Trp
CCA
[ENA]
¢þ
>WENV182456470
OIMY01006335
[OIMY] human gut metagenome; human gut
640
565
-
Lys
CTT
[ENA]
¢þ
>WENV182456467
OIMY01005756
[OIMY] human gut metagenome; human gut
644
720
+
Val
CAC
[ENA]
¢þ
>WENV182456448
OIMY01002896
[OIMY] human gut metagenome; human gut
667
740
+
Asn
GTT
[ENA]
¢þ
>WENV182456454
OIMY01003380
[OIMY] human gut metagenome; human gut
674
749
+
Thr
CGT
[ENA]
¢þ
>WENV182456458
OIMY01003744
[OIMY] human gut metagenome; human gut
702
628
-
Ile2
CAT
[ENA]
¢þ
>WENV182456449
OIMY01002896
[OIMY] human gut metagenome; human gut
776
848
+
Cys
GCA
[ENA]
¢þ
>WENV182456457
OIMY01003744
[OIMY] human gut metagenome; human gut
779
707
-
Thr
TGT
[ENA]
¢þ
>WENV182456427
OIMY01000959
[OIMY] human gut metagenome; human gut
797
872
+
Ile2
CAT
[ENA]
¢þ
>WENV182456417
OIMY01000507
[OIMY] human gut metagenome; human gut
846
774
-
Arg
CCT
[ENA]
¢þ
>WENV182456438
OIMY01001479
[OIMY] human gut metagenome; human gut
857
783
-
Asp
GTC
[ENA]
¢þ
>WENV182456456
OIMY01003744
[OIMY] human gut metagenome; human gut
868
786
-
Tyr
GTA
[ENA]
¢þ
>WENV182456428
OIMY01000968
[OIMY] human gut metagenome; human gut
930
858
-
Glu
TTC
[ENA]
¢þ
>WENV182456421
OIMY01000574
[OIMY] human gut metagenome; human gut
939
866
-
Trp
CCA
[ENA]
¢þ
>WENV182456455
OIMY01003744
[OIMY] human gut metagenome; human gut
953
880
-
Val
TAC
[ENA]
¢þ
>WENV182456425
OIMY01000761
[OIMY] human gut metagenome; human gut
1013
1089
+
Arg
CCG
[ENA]
¢þ
>WENV182456416
OIMY01000504
[OIMY] human gut metagenome; human gut
1019
1093
+
Pro
GGG
[ENA]
¢þ
>WENV182456453
OIMY01003135
[OIMY] human gut metagenome; human gut
1029
955
-
Ala
TGC
[ENA]
¢þ
>WENV182456446
OIMY01002849
[OIMY] human gut metagenome; human gut
1087
1158
+
Gln
TTG
[ENA]
¢þ
>WENV182456422
OIMY01000652
[OIMY] human gut metagenome; human gut
1099
1174
+
Pro
TGG
[ENA]
¢þ
>WENV182456440
OIMY01001824
[OIMY] human gut metagenome; human gut
1102
1028
-
Ile2
CAT
[ENA]
¢þ
>WENV182456411
OIMY01000298
[OIMY] human gut metagenome; human gut
1109
1026
-
Leu
GAG
[ENA]
¢þ
>WENV182456451
OIMY01002950
[OIMY] human gut metagenome; human gut
1109
1036
-
Pro
CGG
[ENA]
¢þ
>WENV182456450
OIMY01002950
[OIMY] human gut metagenome; human gut
1212
1139
-
Gln
CTG
[ENA]
¢þ
>WENV182456433
OIMY01001207
[OIMY] human gut metagenome; human gut
1428
1501
+
Trp
CCA
[ENA]
¢þ
>WENV182456388
OIMY01000122
[OIMY] human gut metagenome; human gut
1436
1361
-
Lys
TTT
[ENA]
¢þ
>WENV182456439
OIMY01001535
[OIMY] human gut metagenome; human gut
1792
1716
-
Arg
ACG
[ENA]
¢þ
>WENV182456426
OIMY01000900
[OIMY] human gut metagenome; human gut
1877
1950
+
fMet
CAT
[ENA]
¢þ
>WENV182456410
OIMY01000281
[OIMY] human gut metagenome; human gut
1902
1988
+
Leu
CAG
[ENA]
¢þ
>WENV182456436
OIMY01001366
[OIMY] human gut metagenome; human gut
1935
1861
-
Ala
TGC
[ENA]
¢þ
>WENV182456394
OIMY01000164
[OIMY] human gut metagenome; human gut
1963
2036
+
Lys
TTT
[ENA]
¢þ
>WENV182456373
OIMY01000038
[OIMY] human gut metagenome; human gut
1980
1896
-
Leu
TAG
[ENA]
¢þ
>WENV182456435
OIMY01001366
[OIMY] human gut metagenome; human gut
2024
1950
-
Ile
GAT
[ENA]
¢þ
>WENV182456434
OIMY01001258
[OIMY] human gut metagenome; human gut
2200
2127
-
Ala
TGC
[ENA]
¢þ
>WENV182456420
OIMY01000574
[OIMY] human gut metagenome; human gut
2299
2227
-
Thr
GGT
[ENA]
¢þ
>WENV182456398
OIMY01000192
[OIMY] human gut metagenome; human gut
2303
2393
+
Ser
CGA
[ENA]
¢þ
>WENV182456419
OIMY01000574
[OIMY] human gut metagenome; human gut
2398
2315
-
Tyr
GTA
[ENA]
¢þ
>WENV182456378
OIMY01000045
[OIMY] human gut metagenome; human gut
2410
2326
-
Leu
CAA
[ENA]
¢þ
>WENV182456408
OIMY01000268
[OIMY] human gut metagenome; human gut
2445
2370
-
Gly
GCC
[ENA]
¢þ
>WENV182456430
OIMY01001028
[OIMY] human gut metagenome; human gut
2618
2544
-
Ala
GGC
[ENA]
¢þ
>WENV182456407
OIMY01000268
[OIMY] human gut metagenome; human gut
2684
2609
-
Phe
GAA
[ENA]
¢þ
>WENV182456359
OIMY01000011
[OIMY] human gut metagenome; human gut
2771
2686
-
Ser
TGA
[ENA]
¢þ
>WENV182456424
OIMY01000699
[OIMY] human gut metagenome; human gut
2821
2745
-
His
GTG
[ENA]
¢þ
>WENV182456423
OIMY01000699
[OIMY] human gut metagenome; human gut
2904
2829
-
Arg
TCT
[ENA]
¢þ
>WENV182456418
OIMY01000550
[OIMY] human gut metagenome; human gut
2917
3002
+
Ser
TGA
[ENA]
¢þ
>WENV182456397
OIMY01000170
[OIMY] human gut metagenome; human gut
3219
3146
-
Trp
CCA
[ENA]
¢þ
>WENV182456412
OIMY01000338
[OIMY] human gut metagenome; human gut
3974
4059
+
Tyr
GTA
[ENA]
¢þ
>WENV182456413
OIMY01000398
[OIMY] human gut metagenome; human gut
4402
4476
+
Gly
TCC
[ENA]
¢þ
>WENV182456393
OIMY01000149
[OIMY] human gut metagenome; human gut
4561
4635
+
Thr
TGT
[ENA]
¢þ
>WENV182456409
OIMY01000273
[OIMY] human gut metagenome; human gut
4588
4513
-
Val
GAC
[ENA]
¢þ
>WENV182456414
OIMY01000408
[OIMY] human gut metagenome; human gut
4957
5044
+
Ser
TGA
[ENA]
¢þ
>WENV182456415
OIMY01000408
[OIMY] human gut metagenome; human gut
5076
5165
+
Ser
GCT
[ENA]
¢þ
>WENV182456406
OIMY01000229
[OIMY] human gut metagenome; human gut
5299
5223
-
Asn
GTT
[ENA]
¢þ
>WENV182456405
OIMY01000229
[OIMY] human gut metagenome; human gut
5413
5339
-
Glu
CTC
[ENA]
¢þ
>WENV182456372
OIMY01000033
[OIMY] human gut metagenome; human gut
7254
7342
+
Ser
GGA
[ENA]
¢þ
>WENV182456401
OIMY01000205
[OIMY] human gut metagenome; human gut
7272
7196
-
fMet
CAT
[ENA]
¢þ
>WENV182456392
OIMY01000145
[OIMY] human gut metagenome; human gut
7529
7456
-
Gly
CCC
[ENA]
¢þ
>WENV182456400
OIMY01000195
[OIMY] human gut metagenome; human gut
10922
10851
-
Glu
TTC
[ENA]
¢þ
>WENV182456384
OIMY01000082
[OIMY] human gut metagenome; human gut
10938
10865
-
Lys
CTT
[ENA]
¢þ
>WENV182456399
OIMY01000195
[OIMY] human gut metagenome; human gut
11090
11014
-
Met
CAT
[ENA]
¢þ
>WENV182456381
OIMY01000075
[OIMY] human gut metagenome; human gut
12045
11957
-
Ser
GGA
[ENA]
¢þ
>WENV182456379
OIMY01000057
[OIMY] human gut metagenome; human gut
12535
12608
+
Phe
GAA
[ENA]
¢þ
>WENV182456389
OIMY01000129
[OIMY] human gut metagenome; human gut
12610
12536
-
Ala
GGC
[ENA]
¢þ
>WENV182456350
OIMY01000003
[OIMY] human gut metagenome; human gut
12785
12858
+
Thr
CGT
[ENA]
¢þ
>WENV182456352
OIMY01000004
[OIMY] human gut metagenome; human gut
13164
13238
+
Asn
GTT
[ENA]
¢þ
>WENV182456395
OIMY01000169
[OIMY] human gut metagenome; human gut
13539
13612
+
Gly
GCC
[ENA]
¢þ
>WENV182456396
OIMY01000169
[OIMY] human gut metagenome; human gut
13628
13712
+
Leu
TAA
[ENA]
¢þ
>WENV182456390
OIMY01000130
[OIMY] human gut metagenome; human gut
16134
16052
-
Leu
TAG
[ENA]
¢þ
>WENV182456358
OIMY01000011
[OIMY] human gut metagenome; human gut
16398
16471
+
Trp
CCA
[ENA]
¢þ
>WENV182456387
OIMY01000112
[OIMY] human gut metagenome; human gut
17677
17751
+
Glu
TTC
[ENA]
¢þ
>WENV182456391
OIMY01000141
[OIMY] human gut metagenome; human gut
17877
17948
+
Gln
CTG
[ENA]
¢þ
>WENV182456371
OIMY01000032
[OIMY] human gut metagenome; human gut
20424
20509
+
Ser
TGA
[ENA]
¢þ
>WENV182456365
OIMY01000021
[OIMY] human gut metagenome; human gut
20470
20396
-
Asp
GTC
[ENA]
¢þ
>WENV182456386
OIMY01000094
[OIMY] human gut metagenome; human gut
29491
29416
-
Val
TAC
[ENA]
¢þ
>WENV182456356
OIMY01000010
[OIMY] human gut metagenome; human gut
30364
30435
+
Gln
TTG
[ENA]
¢þ
>WENV182456362
OIMY01000015
[OIMY] human gut metagenome; human gut
31328
31415
+
Ser
GCT
[ENA]
¢þ
>WENV182456363
OIMY01000015
[OIMY] human gut metagenome; human gut
31675
31748
+
Glu
CTC
[ENA]
¢þ
>WENV182456385
OIMY01000084
[OIMY] human gut metagenome; human gut
33829
33900
+
Gln
CTG
[ENA]
¢þ
>WENV182456383
OIMY01000080
[OIMY] human gut metagenome; human gut
35126
35199
+
Gly
GCC
[ENA]
¢þ
>WENV182456382
OIMY01000076
[OIMY] human gut metagenome; human gut
36637
36563
-
Asn
GTT
[ENA]
¢þ
>WENV182456369
OIMY01000030
[OIMY] human gut metagenome; human gut
47551
47476
-
Pro
TGG
[ENA]
¢þ
>WENV182456364
OIMY01000018
[OIMY] human gut metagenome; human gut
47734
47806
+
Glu
TTC
[ENA]
¢þ
>WENV182456376
OIMY01000042
[OIMY] human gut metagenome; human gut
49073
49146
+
fMet
CAT
[ENA]
¢þ
>WENV182456349
OIMY01000002
[OIMY] human gut metagenome; human gut
49931
49846
-
Leu
TAA
[ENA]
¢þ
>WENV182456348
OIMY01000002
[OIMY] human gut metagenome; human gut
50020
49947
-
Gly
GCC
[ENA]
¢þ
>WENV182456370
OIMY01000031
[OIMY] human gut metagenome; human gut
52023
51951
-
Cys
GCA
[ENA]
¢þ
>WENV182456374
OIMY01000039
[OIMY] human gut metagenome; human gut
55342
55268
-
Ala
GGC
[ENA]
¢þ
>WENV182456361
OIMY01000014
[OIMY] human gut metagenome; human gut
56486
56412
-
Thr
TGT
[ENA]
¢þ
>WENV182456377
OIMY01000045
[OIMY] human gut metagenome; human gut
57365
57437
+
Glu
TTC
[ENA]
¢þ
>WENV182456355
OIMY01000009
[OIMY] human gut metagenome; human gut
57521
57450
-
Gln
TTG
[ENA]
¢þ
>WENV182456351
OIMY01000003
[OIMY] human gut metagenome; human gut
58173
58100
-
Pro
CGG
[ENA]
¢þ
>WENV182456360
OIMY01000013
[OIMY] human gut metagenome; human gut
66264
66338
+
His
GTG
[ENA]
¢þ
>WENV182456368
OIMY01000025
[OIMY] human gut metagenome; human gut
68727
68639
-
Ser
GGA
[ENA]
¢þ
>WENV182456375
OIMY01000041
[OIMY] human gut metagenome; human gut
69215
69288
+
fMet
CAT
[ENA]
¢þ
>WENV182456367
OIMY01000023
[OIMY] human gut metagenome; human gut
77551
77476
-
Pro
GGG
[ENA]
¢þ
>WENV182456346
OIMY01000001
[OIMY] human gut metagenome; human gut
77693
77620
-
Thr
CGT
[ENA]
¢þ
>WENV182456366
OIMY01000022
[OIMY] human gut metagenome; human gut
78934
79007
+
Lys
TTT
[ENA]
¢þ
>WENV182456357
OIMY01000010
[OIMY] human gut metagenome; human gut
90344
90270
-
Ile2
CAT
[ENA]
¢þ
>WENV182456353
OIMY01000006
[OIMY] human gut metagenome; human gut
97332
97258
-
Met
CAT
[ENA]
¢þ
>WENV182456354
OIMY01000008
[OIMY] human gut metagenome; human gut
114537
114463
-
Ile2
CAT
[ENA]
¢þ
>WENV182456347
OIMY01000002
[OIMY] human gut metagenome; human gut
119099
119171
+
Arg
CCT
[ENA]
¢þ
>WENV182456345
OIMY01000001
[OIMY] human gut metagenome; human gut
229624
229552
-
Arg
CCG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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