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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OINU] human gut metagenome; human gut
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182461721
OINU01003464
[OINU] human gut metagenome; human gut
55
137
+
Leu
TAG
[ENA]
¢þ
>WENV182461684
OINU01000377
[OINU] human gut metagenome; human gut
75
150
+
Ala
TGC
[ENA]
¢þ
>WENV182461719
OINU01003347
[OINU] human gut metagenome; human gut
82
153
+
Gln
CTG
[ENA]
¢þ
>WENV182461723
OINU01004347
[OINU] human gut metagenome; human gut
123
196
+
Thr
CGT
[ENA]
¢þ
>WENV182461685
OINU01000377
[OINU] human gut metagenome; human gut
154
230
+
Ile
GAT
[ENA]
¢þ
>WENV182461720
OINU01003358
[OINU] human gut metagenome; human gut
160
236
+
Pro
GGG
[ENA]
¢þ
>WENV182461725
OINU01004623
[OINU] human gut metagenome; human gut
193
277
+
Leu
AAG
[ENA]
¢þ
>WENV182461724
OINU01004421
[OINU] human gut metagenome; human gut
240
313
+
Gly
TCC
[ENA]
¢þ
>WENV182461657
OINU01000146
[OINU] human gut metagenome; human gut
339
265
-
Met
CAT
[ENA]
¢þ
>WENV182461703
OINU01000789
[OINU] human gut metagenome; human gut
342
417
+
Val
GAC
[ENA]
¢þ
>WENV182461722
OINU01003661
[OINU] human gut metagenome; human gut
346
265
-
Leu
TAG
[ENA]
¢þ
>WENV182461715
OINU01002868
[OINU] human gut metagenome; human gut
353
281
-
Pro
TGG
[ENA]
¢þ
>WENV182461711
OINU01002132
[OINU] human gut metagenome; human gut
365
290
-
Arg
CCT
[ENA]
¢þ
>WENV182461660
OINU01000154
[OINU] human gut metagenome; human gut
383
301
-
Leu
TAG
[ENA]
¢þ
>WENV182461718
OINU01003114
[OINU] human gut metagenome; human gut
410
335
-
Glu
TTC
[ENA]
¢þ
>WENV182461694
OINU01000556
[OINU] human gut metagenome; human gut
424
497
+
Thr
CGT
[ENA]
¢þ
>WENV182461696
OINU01000599
[OINU] human gut metagenome; human gut
449
362
-
Leu
TAA
[ENA]
¢þ
>WENV182461700
OINU01000602
[OINU] human gut metagenome; human gut
463
388
-
Gly
GCC
[ENA]
¢þ
>WENV182461716
OINU01002918
[OINU] human gut metagenome; human gut
468
379
-
Ser
GCT
[ENA]
¢þ
>WENV182461710
OINU01001805
[OINU] human gut metagenome; human gut
473
401
-
Glu
CTC
[ENA]
¢þ
>WENV182461656
OINU01000146
[OINU] human gut metagenome; human gut
474
400
-
Met
CAT
[ENA]
¢þ
>WENV182461714
OINU01002400
[OINU] human gut metagenome; human gut
484
410
-
Thr
GGT
[ENA]
¢þ
>WENV182461717
OINU01003114
[OINU] human gut metagenome; human gut
494
419
-
Ala
GGC
[ENA]
¢þ
>WENV182461706
OINU01001383
[OINU] human gut metagenome; human gut
504
578
+
Gly
GCC
[ENA]
¢þ
>WENV182461687
OINU01000404
[OINU] human gut metagenome; human gut
530
604
+
Ile
GAT
[ENA]
¢þ
>WENV182461712
OINU01002149
[OINU] human gut metagenome; human gut
533
461
-
Thr
CGT
[ENA]
¢þ
>WENV182461695
OINU01000599
[OINU] human gut metagenome; human gut
551
476
-
Asp
GTC
[ENA]
¢þ
>WENV182461713
OINU01002291
[OINU] human gut metagenome; human gut
551
627
+
Arg
ACG
[ENA]
¢þ
>WENV182461699
OINU01000602
[OINU] human gut metagenome; human gut
568
492
-
Phe
GAA
[ENA]
¢þ
>WENV182461707
OINU01001383
[OINU] human gut metagenome; human gut
586
660
+
Cys
GCA
[ENA]
¢þ
>WENV182461688
OINU01000404
[OINU] human gut metagenome; human gut
621
695
+
Ala
TGC
[ENA]
¢þ
>WENV182461689
OINU01000415
[OINU] human gut metagenome; human gut
648
735
+
Ser
GCT
[ENA]
¢þ
>WENV182461682
OINU01000253
[OINU] human gut metagenome; human gut
659
584
-
Gly
CCC
[ENA]
¢þ
>WENV182461708
OINU01001383
[OINU] human gut metagenome; human gut
675
763
+
Leu
TAA
[ENA]
¢þ
>WENV182461709
OINU01001524
[OINU] human gut metagenome; human gut
676
586
-
Leu
TAA
[ENA]
¢þ
>WENV182461698
OINU01000602
[OINU] human gut metagenome; human gut
676
600
-
Asp
GTC
[ENA]
¢þ
>WENV182461704
OINU01000821
[OINU] human gut metagenome; human gut
802
872
+
Gln
CTG
[ENA]
¢þ
>WENV182461645
OINU01000044
[OINU] human gut metagenome; human gut
829
902
+
Trp
CCA
[ENA]
¢þ
>WENV182461701
OINU01000630
[OINU] human gut metagenome; human gut
849
935
+
Leu
CAG
[ENA]
¢þ
>WENV182461697
OINU01000602
[OINU] human gut metagenome; human gut
923
848
-
Trp
CCA
[ENA]
¢þ
>WENV182461705
OINU01000821
[OINU] human gut metagenome; human gut
937
1012
+
Pro
CGG
[ENA]
¢þ
>WENV182461655
OINU01000122
[OINU] human gut metagenome; human gut
1041
967
-
Arg
TCT
[ENA]
¢þ
>WENV182461690
OINU01000415
[OINU] human gut metagenome; human gut
1090
1164
+
Glu
CTC
[ENA]
¢þ
>WENV182461702
OINU01000636
[OINU] human gut metagenome; human gut
1294
1369
+
Asn
GTT
[ENA]
¢þ
>WENV182461664
OINU01000188
[OINU] human gut metagenome; human gut
1568
1494
-
Thr
TGT
[ENA]
¢þ
>WENV182461659
OINU01000153
[OINU] human gut metagenome; human gut
1679
1594
-
Leu
TAA
[ENA]
¢þ
>WENV182461693
OINU01000500
[OINU] human gut metagenome; human gut
1710
1634
-
Arg
TCT
[ENA]
¢þ
>WENV182461658
OINU01000153
[OINU] human gut metagenome; human gut
1768
1695
-
Gly
GCC
[ENA]
¢þ
>WENV182461692
OINU01000500
[OINU] human gut metagenome; human gut
2040
1967
-
Gly
TCC
[ENA]
¢þ
>WENV182461691
OINU01000500
[OINU] human gut metagenome; human gut
2126
2050
-
Pro
TGG
[ENA]
¢þ
>WENV182461667
OINU01000210
[OINU] human gut metagenome; human gut
2467
2552
+
Ser
GCT
[ENA]
¢þ
>WENV182461668
OINU01000210
[OINU] human gut metagenome; human gut
2558
2633
+
Arg
ACG
[ENA]
¢þ
>WENV182461669
OINU01000210
[OINU] human gut metagenome; human gut
2640
2726
+
Ser
TGA
[ENA]
¢þ
>WENV182461670
OINU01000210
[OINU] human gut metagenome; human gut
2732
2803
+
Gln
CTG
[ENA]
¢þ
>WENV182461671
OINU01000210
[OINU] human gut metagenome; human gut
2812
2885
+
Phe
GAA
[ENA]
¢þ
>WENV182461686
OINU01000398
[OINU] human gut metagenome; human gut
2940
3015
+
Pro
TGG
[ENA]
¢þ
>WENV182461672
OINU01000210
[OINU] human gut metagenome; human gut
3003
3074
+
Gln
TTG
[ENA]
¢þ
>WENV182461673
OINU01000210
[OINU] human gut metagenome; human gut
3087
3158
+
Arg
TCG
[ENA]
¢þ
>WENV182461674
OINU01000210
[OINU] human gut metagenome; human gut
3164
3237
+
His
GTG
[ENA]
¢þ
>WENV182461675
OINU01000210
[OINU] human gut metagenome; human gut
3242
3316
+
Thr
TGT
[ENA]
¢þ
>WENV182461683
OINU01000365
[OINU] human gut metagenome; human gut
3749
3824
+
His
GTG
[ENA]
¢þ
>WENV182461662
OINU01000176
[OINU] human gut metagenome; human gut
4405
4480
+
Lys
TTT
[ENA]
¢þ
>WENV182461678
OINU01000220
[OINU] human gut metagenome; human gut
5945
6019
+
Thr
TGT
[ENA]
¢þ
>WENV182461679
OINU01000220
[OINU] human gut metagenome; human gut
6062
6145
+
Tyr
GTA
[ENA]
¢þ
>WENV182461652
OINU01000105
[OINU] human gut metagenome; human gut
6158
6085
-
Lys
CTT
[ENA]
¢þ
>WENV182461680
OINU01000220
[OINU] human gut metagenome; human gut
6238
6310
+
Thr
GGT
[ENA]
¢þ
>WENV182461651
OINU01000105
[OINU] human gut metagenome; human gut
6251
6178
-
Lys
CTT
[ENA]
¢þ
>WENV182461650
OINU01000105
[OINU] human gut metagenome; human gut
6348
6275
-
Lys
CTT
[ENA]
¢þ
>WENV182461681
OINU01000249
[OINU] human gut metagenome; human gut
6774
6845
+
Gln
CTG
[ENA]
¢þ
>WENV182461676
OINU01000217
[OINU] human gut metagenome; human gut
7534
7608
+
Asn
GTT
[ENA]
¢þ
>WENV182461677
OINU01000217
[OINU] human gut metagenome; human gut
7633
7707
+
Asn
GTT
[ENA]
¢þ
>WENV182461661
OINU01000167
[OINU] human gut metagenome; human gut
8122
8048
-
Ala
GGC
[ENA]
¢þ
>WENV182461646
OINU01000047
[OINU] human gut metagenome; human gut
8346
8418
+
Arg
CCT
[ENA]
¢þ
>WENV182461666
OINU01000198
[OINU] human gut metagenome; human gut
8370
8444
+
Cys
GCA
[ENA]
¢þ
>WENV182461633
OINU01000002
[OINU] human gut metagenome; human gut
8771
8844
+
fMet
CAT
[ENA]
¢þ
>WENV182461663
OINU01000181
[OINU] human gut metagenome; human gut
8775
8847
+
Glu
TTC
[ENA]
¢þ
>WENV182461665
OINU01000189
[OINU] human gut metagenome; human gut
8828
8901
+
Phe
GAA
[ENA]
¢þ
>WENV182461634
OINU01000002
[OINU] human gut metagenome; human gut
9062
9135
+
Asn
GTT
[ENA]
¢þ
>WENV182461635
OINU01000002
[OINU] human gut metagenome; human gut
9142
9215
+
Trp
CCA
[ENA]
¢þ
>WENV182461636
OINU01000002
[OINU] human gut metagenome; human gut
9220
9291
+
Gln
TTG
[ENA]
¢þ
>WENV182461637
OINU01000002
[OINU] human gut metagenome; human gut
9296
9368
+
Glu
TTC
[ENA]
¢þ
>WENV182461638
OINU01000002
[OINU] human gut metagenome; human gut
9532
9614
+
Tyr
GTA
[ENA]
¢þ
>WENV182461654
OINU01000121
[OINU] human gut metagenome; human gut
9754
9680
-
Asp
GTC
[ENA]
¢þ
>WENV182461649
OINU01000083
[OINU] human gut metagenome; human gut
12466
12540
+
Thr
TGT
[ENA]
¢þ
>WENV182461653
OINU01000117
[OINU] human gut metagenome; human gut
13676
13761
+
Ser
TGA
[ENA]
¢þ
>WENV182461642
OINU01000015
[OINU] human gut metagenome; human gut
13679
13767
+
Ser
GGA
[ENA]
¢þ
>WENV182461644
OINU01000041
[OINU] human gut metagenome; human gut
13711
13782
+
Gln
TTG
[ENA]
¢þ
>WENV182461648
OINU01000074
[OINU] human gut metagenome; human gut
17212
17127
-
Ser
TGA
[ENA]
¢þ
>WENV182461647
OINU01000072
[OINU] human gut metagenome; human gut
17791
17863
+
Arg
CCG
[ENA]
¢þ
>WENV182461640
OINU01000005
[OINU] human gut metagenome; human gut
18189
18115
-
Ile2
CAT
[ENA]
¢þ
>WENV182461643
OINU01000026
[OINU] human gut metagenome; human gut
30735
30659
-
Val
TAC
[ENA]
¢þ
>WENV182461641
OINU01000009
[OINU] human gut metagenome; human gut
35814
35902
+
Ser
GGA
[ENA]
¢þ
>WENV182461639
OINU01000003
[OINU] human gut metagenome; human gut
62614
62541
-
Pro
CGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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