This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OINZ] human gut metagenome; human gut
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182462749
OINZ01002050
[OINZ] human gut metagenome; human gut
24
97
+
Gly
CCC
[ENA]
¢þ
>WENV182462693
OINZ01000120
[OINZ] human gut metagenome; human gut
105
20
-
Ser
TGA
[ENA]
¢þ
>WENV182462723
OINZ01000582
[OINZ] human gut metagenome; human gut
111
37
-
Glu
CTC
[ENA]
¢þ
>WENV182462748
OINZ01002014
[OINZ] human gut metagenome; human gut
116
202
+
Leu
CAG
[ENA]
¢þ
>WENV182462753
OINZ01002809
[OINZ] human gut metagenome; human gut
118
42
-
Arg
CCT
[ENA]
¢þ
>WENV182462751
OINZ01002279
[OINZ] human gut metagenome; human gut
127
201
+
Ala
GGC
[ENA]
¢þ
>WENV182462701
OINZ01000181
[OINZ] human gut metagenome; human gut
153
79
-
Asn
GTT
[ENA]
¢þ
>WENV182462741
OINZ01001619
[OINZ] human gut metagenome; human gut
154
78
-
Arg
ACG
[ENA]
¢þ
>WENV182462712
OINZ01000448
[OINZ] human gut metagenome; human gut
161
235
+
Arg
TCT
[ENA]
¢þ
>WENV182462747
OINZ01001976
[OINZ] human gut metagenome; human gut
203
128
-
Val
GAC
[ENA]
¢þ
>WENV182462752
OINZ01002771
[OINZ] human gut metagenome; human gut
218
145
-
Ile2
CAT
[ENA]
¢þ
>WENV182462750
OINZ01002085
[OINZ] human gut metagenome; human gut
251
178
-
Arg
CCG
[ENA]
¢þ
>WENV182462739
OINZ01001601
[OINZ] human gut metagenome; human gut
285
356
+
Gln
CTG
[ENA]
¢þ
>WENV182462756
OINZ01003503
[OINZ] human gut metagenome; human gut
297
222
-
Pro
TGG
[ENA]
¢þ
>WENV182462754
OINZ01003075
[OINZ] human gut metagenome; human gut
299
387
+
Ser
TGA
[ENA]
¢þ
>WENV182462736
OINZ01001146
[OINZ] human gut metagenome; human gut
329
408
+
Leu
CAA
[ENA]
¢þ
>WENV182462732
OINZ01000929
[OINZ] human gut metagenome; human gut
336
252
-
Tyr
GTA
[ENA]
¢þ
>WENV182462744
OINZ01001705
[OINZ] human gut metagenome; human gut
357
283
-
Ile2
CAT
[ENA]
¢þ
>WENV182462758
OINZ01003651
[OINZ] human gut metagenome; human gut
366
437
+
Gln
TTG
[ENA]
¢þ
>WENV182462757
OINZ01003554
[OINZ] human gut metagenome; human gut
379
454
+
Val
TAC
[ENA]
¢þ
>WENV182462755
OINZ01003075
[OINZ] human gut metagenome; human gut
391
465
+
Asn
GTT
[ENA]
¢þ
>WENV182462743
OINZ01001670
[OINZ] human gut metagenome; human gut
399
311
-
Ser
GGA
[ENA]
¢þ
>WENV182462738
OINZ01001262
[OINZ] human gut metagenome; human gut
454
530
+
Arg
CCG
[ENA]
¢þ
>WENV182462730
OINZ01000836
[OINZ] human gut metagenome; human gut
462
380
-
Leu
TAG
[ENA]
¢þ
>WENV182462737
OINZ01001240
[OINZ] human gut metagenome; human gut
480
552
+
Glu
CTC
[ENA]
¢þ
>WENV182462746
OINZ01001965
[OINZ] human gut metagenome; human gut
526
437
-
Ser
GCT
[ENA]
¢þ
>WENV182462742
OINZ01001670
[OINZ] human gut metagenome; human gut
544
457
-
Ser
TGA
[ENA]
¢þ
>WENV182462740
OINZ01001618
[OINZ] human gut metagenome; human gut
549
646
+
SeC
TCA
[ENA]
¢þ
>WENV182462735
OINZ01001142
[OINZ] human gut metagenome; human gut
606
678
+
Trp
CCA
[ENA]
¢þ
>WENV182462745
OINZ01001965
[OINZ] human gut metagenome; human gut
644
557
-
Ser
TGA
[ENA]
¢þ
>WENV182462729
OINZ01000836
[OINZ] human gut metagenome; human gut
665
594
-
Gln
TTG
[ENA]
¢þ
>WENV182462733
OINZ01001014
[OINZ] human gut metagenome; human gut
678
602
-
Arg
ACG
[ENA]
¢þ
>WENV182462728
OINZ01000836
[OINZ] human gut metagenome; human gut
792
718
-
His
GTG
[ENA]
¢þ
>WENV182462734
OINZ01001097
[OINZ] human gut metagenome; human gut
847
776
-
Gln
CTG
[ENA]
¢þ
>WENV182462727
OINZ01000836
[OINZ] human gut metagenome; human gut
873
799
-
Arg
TCT
[ENA]
¢þ
>WENV182462726
OINZ01000836
[OINZ] human gut metagenome; human gut
988
918
-
Gly
TCC
[ENA]
¢þ
>WENV182462725
OINZ01000836
[OINZ] human gut metagenome; human gut
1067
992
-
Pro
TGG
[ENA]
¢þ
>WENV182462731
OINZ01000913
[OINZ] human gut metagenome; human gut
1072
1158
+
Leu
CAA
[ENA]
¢þ
>WENV182462679
OINZ01000036
[OINZ] human gut metagenome; human gut
1180
1252
+
Glu
TTC
[ENA]
¢þ
>WENV182462689
OINZ01000097
[OINZ] human gut metagenome; human gut
1337
1263
-
Ala
TGC
[ENA]
¢þ
>WENV182462688
OINZ01000097
[OINZ] human gut metagenome; human gut
1428
1354
-
Ile
GAT
[ENA]
¢þ
>WENV182462724
OINZ01000736
[OINZ] human gut metagenome; human gut
1482
1557
+
Pro
GGG
[ENA]
¢þ
>WENV182462722
OINZ01000565
[OINZ] human gut metagenome; human gut
1659
1585
-
Glu
CTC
[ENA]
¢þ
>WENV182462702
OINZ01000199
[OINZ] human gut metagenome; human gut
1924
1850
-
Thr
TGT
[ENA]
¢þ
>WENV182462711
OINZ01000432
[OINZ] human gut metagenome; human gut
1936
1851
-
Ser
TGA
[ENA]
¢þ
>WENV182462721
OINZ01000565
[OINZ] human gut metagenome; human gut
2101
2014
-
Ser
GCT
[ENA]
¢þ
>WENV182462671
OINZ01000011
[OINZ] human gut metagenome; human gut
2159
2232
+
fMet
CAT
[ENA]
¢þ
>WENV182462672
OINZ01000011
[OINZ] human gut metagenome; human gut
2450
2523
+
Asn
GTT
[ENA]
¢þ
>WENV182462673
OINZ01000011
[OINZ] human gut metagenome; human gut
2530
2603
+
Trp
CCA
[ENA]
¢þ
>WENV182462674
OINZ01000011
[OINZ] human gut metagenome; human gut
2608
2679
+
Gln
TTG
[ENA]
¢þ
>WENV182462675
OINZ01000011
[OINZ] human gut metagenome; human gut
2684
2756
+
Glu
TTC
[ENA]
¢þ
>WENV182462720
OINZ01000463
[OINZ] human gut metagenome; human gut
2796
2722
-
Thr
TGT
[ENA]
¢þ
>WENV182462703
OINZ01000216
[OINZ] human gut metagenome; human gut
2806
2880
+
Asp
GTC
[ENA]
¢þ
>WENV182462719
OINZ01000463
[OINZ] human gut metagenome; human gut
2874
2801
-
His
GTG
[ENA]
¢þ
>WENV182462676
OINZ01000011
[OINZ] human gut metagenome; human gut
2920
3002
+
Tyr
GTA
[ENA]
¢þ
>WENV182462687
OINZ01000086
[OINZ] human gut metagenome; human gut
2930
3004
+
Asp
GTC
[ENA]
¢þ
>WENV182462718
OINZ01000463
[OINZ] human gut metagenome; human gut
2951
2880
-
Arg
TCG
[ENA]
¢þ
>WENV182462717
OINZ01000463
[OINZ] human gut metagenome; human gut
3035
2964
-
Gln
TTG
[ENA]
¢þ
>WENV182462677
OINZ01000018
[OINZ] human gut metagenome; human gut
3185
3112
-
Gly
GCC
[ENA]
¢þ
>WENV182462716
OINZ01000463
[OINZ] human gut metagenome; human gut
3226
3153
-
Phe
GAA
[ENA]
¢þ
>WENV182462715
OINZ01000463
[OINZ] human gut metagenome; human gut
3306
3235
-
Gln
CTG
[ENA]
¢þ
>WENV182462714
OINZ01000463
[OINZ] human gut metagenome; human gut
3398
3312
-
Ser
TGA
[ENA]
¢þ
>WENV182462707
OINZ01000394
[OINZ] human gut metagenome; human gut
3475
3550
+
Asp
GTC
[ENA]
¢þ
>WENV182462713
OINZ01000463
[OINZ] human gut metagenome; human gut
3480
3405
-
Arg
ACG
[ENA]
¢þ
>WENV182462708
OINZ01000394
[OINZ] human gut metagenome; human gut
3579
3652
+
Val
TAC
[ENA]
¢þ
>WENV182462709
OINZ01000394
[OINZ] human gut metagenome; human gut
3664
3745
+
Tyr
GTA
[ENA]
¢þ
>WENV182462710
OINZ01000394
[OINZ] human gut metagenome; human gut
3757
3845
+
Leu
TAA
[ENA]
¢þ
>WENV182462705
OINZ01000319
[OINZ] human gut metagenome; human gut
4062
4137
+
Gly
CCC
[ENA]
¢þ
>WENV182462706
OINZ01000386
[OINZ] human gut metagenome; human gut
4104
4186
+
Leu
TAG
[ENA]
¢þ
>WENV182462678
OINZ01000033
[OINZ] human gut metagenome; human gut
4780
4854
+
Thr
TGT
[ENA]
¢þ
>WENV182462694
OINZ01000136
[OINZ] human gut metagenome; human gut
5297
5373
+
Val
TAC
[ENA]
¢þ
>WENV182462704
OINZ01000232
[OINZ] human gut metagenome; human gut
6048
6123
+
Lys
TTT
[ENA]
¢þ
>WENV182462699
OINZ01000151
[OINZ] human gut metagenome; human gut
6880
6807
-
Trp
CCA
[ENA]
¢þ
>WENV182462690
OINZ01000098
[OINZ] human gut metagenome; human gut
7190
7262
+
Arg
CCG
[ENA]
¢þ
>WENV182462698
OINZ01000151
[OINZ] human gut metagenome; human gut
8245
8173
-
Thr
GGT
[ENA]
¢þ
>WENV182462697
OINZ01000151
[OINZ] human gut metagenome; human gut
8421
8338
-
Tyr
GTA
[ENA]
¢þ
>WENV182462700
OINZ01000155
[OINZ] human gut metagenome; human gut
10147
10218
+
Gln
CTG
[ENA]
¢þ
>WENV182462696
OINZ01000150
[OINZ] human gut metagenome; human gut
10195
10270
+
Pro
TGG
[ENA]
¢þ
>WENV182462695
OINZ01000141
[OINZ] human gut metagenome; human gut
10726
10801
+
His
GTG
[ENA]
¢þ
>WENV182462686
OINZ01000064
[OINZ] human gut metagenome; human gut
11386
11312
-
Met
CAT
[ENA]
¢þ
>WENV182462692
OINZ01000114
[OINZ] human gut metagenome; human gut
12322
12249
-
Thr
CGT
[ENA]
¢þ
>WENV182462691
OINZ01000112
[OINZ] human gut metagenome; human gut
12586
12660
+
Cys
GCA
[ENA]
¢þ
>WENV182462685
OINZ01000057
[OINZ] human gut metagenome; human gut
13144
13215
+
Gln
TTG
[ENA]
¢þ
>WENV182462681
OINZ01000050
[OINZ] human gut metagenome; human gut
14137
14210
+
Lys
CTT
[ENA]
¢þ
>WENV182462684
OINZ01000053
[OINZ] human gut metagenome; human gut
18313
18241
-
Thr
TGT
[ENA]
¢þ
>WENV182462683
OINZ01000053
[OINZ] human gut metagenome; human gut
18420
18347
-
Glu
TTC
[ENA]
¢þ
>WENV182462682
OINZ01000053
[OINZ] human gut metagenome; human gut
18497
18425
-
Asn
GTT
[ENA]
¢þ
>WENV182462680
OINZ01000044
[OINZ] human gut metagenome; human gut
19625
19713
+
Ser
GGA
[ENA]
¢þ
>WENV182462667
OINZ01000001
[OINZ] human gut metagenome; human gut
33734
33822
+
Ser
GGA
[ENA]
¢þ
>WENV182462669
OINZ01000003
[OINZ] human gut metagenome; human gut
35513
35440
-
Pro
CGG
[ENA]
¢þ
>WENV182462668
OINZ01000003
[OINZ] human gut metagenome; human gut
35694
35769
+
Phe
GAA
[ENA]
¢þ
>WENV182462670
OINZ01000004
[OINZ] human gut metagenome; human gut
36555
36483
-
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK