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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OIUK] human gut metagenome; human gut
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182502626
OIUK01009421
[OIUK] human gut metagenome; human gut
14
87
+
Thr
CGT
[ENA]
¢þ
>WENV182502602
OIUK01004757
[OIUK] human gut metagenome; human gut
26
97
+
Gln
CTG
[ENA]
¢þ
>WENV182502616
OIUK01006959
[OIUK] human gut metagenome; human gut
43
126
+
Leu
TAA
[ENA]
¢þ
>WENV182502588
OIUK01003306
[OIUK] human gut metagenome; human gut
70
145
+
Gly
GCC
[ENA]
¢þ
>WENV182502614
OIUK01006846
[OIUK] human gut metagenome; human gut
76
163
+
Ser
GGA
[ENA]
¢þ
>WENV182502585
OIUK01002882
[OIUK] human gut metagenome; human gut
123
32
-
Ser
GGA
[ENA]
¢þ
>WENV182502615
OIUK01006906
[OIUK] human gut metagenome; human gut
131
45
-
Leu
GAG
[ENA]
¢þ
>WENV182502630
OIUK01009740
[OIUK] human gut metagenome; human gut
139
64
-
His
GTG
[ENA]
¢þ
>WENV182502605
OIUK01005462
[OIUK] human gut metagenome; human gut
141
66
-
Phe
GAA
[ENA]
¢þ
>WENV182502538
OIUK01000093
[OIUK] human gut metagenome; human gut
166
91
-
Val
TAC
[ENA]
¢þ
>WENV182502607
OIUK01005896
[OIUK] human gut metagenome; human gut
218
143
-
Gly
CCC
[ENA]
¢þ
>WENV182502610
OIUK01006194
[OIUK] human gut metagenome; human gut
224
149
-
Pro
TGG
[ENA]
¢þ
>WENV182502617
OIUK01007245
[OIUK] human gut metagenome; human gut
224
151
-
Arg
CCT
[ENA]
¢þ
>WENV182502627
OIUK01009608
[OIUK] human gut metagenome; human gut
231
155
-
Trp
CCA
[ENA]
¢þ
>WENV182502618
OIUK01007552
[OIUK] human gut metagenome; human gut
239
313
+
Thr
TGT
[ENA]
¢þ
>WENV182502631
OIUK01010012
[OIUK] human gut metagenome; human gut
256
332
+
Ile
GAT
[ENA]
¢þ
>WENV182502629
OIUK01009740
[OIUK] human gut metagenome; human gut
274
198
-
Arg
CCG
[ENA]
¢þ
>WENV182502625
OIUK01008892
[OIUK] human gut metagenome; human gut
293
217
-
Pro
TGG
[ENA]
¢þ
>WENV182502601
OIUK01004661
[OIUK] human gut metagenome; human gut
300
224
-
Arg
TCT
[ENA]
¢þ
>WENV182502628
OIUK01009613
[OIUK] human gut metagenome; human gut
329
254
-
Asn
GTT
[ENA]
¢þ
>WENV182502591
OIUK01003501
[OIUK] human gut metagenome; human gut
355
429
+
Thr
TGT
[ENA]
¢þ
>WENV182502604
OIUK01005406
[OIUK] human gut metagenome; human gut
365
440
+
Phe
GAA
[ENA]
¢þ
>WENV182502619
OIUK01008408
[OIUK] human gut metagenome; human gut
367
461
+
SeC
TCA
[ENA]
¢þ
>WENV182502566
OIUK01001620
[OIUK] human gut metagenome; human gut
379
453
+
Ala
GGC
[ENA]
¢þ
>WENV182502622
OIUK01008812
[OIUK] human gut metagenome; human gut
383
308
-
Thr
GGT
[ENA]
¢þ
>WENV182502624
OIUK01008892
[OIUK] human gut metagenome; human gut
391
299
-
Ser
GCT
[ENA]
¢þ
>WENV182502609
OIUK01006140
[OIUK] human gut metagenome; human gut
438
509
+
Gln
CTG
[ENA]
¢þ
>WENV182502621
OIUK01008812
[OIUK] human gut metagenome; human gut
463
387
-
Asp
GTC
[ENA]
¢þ
>WENV182502600
OIUK01004627
[OIUK] human gut metagenome; human gut
483
408
-
Val
GAC
[ENA]
¢þ
>WENV182502623
OIUK01008892
[OIUK] human gut metagenome; human gut
492
404
-
Ser
TGA
[ENA]
¢þ
>WENV182502612
OIUK01006662
[OIUK] human gut metagenome; human gut
500
576
+
Arg
ACG
[ENA]
¢þ
>WENV182502592
OIUK01003563
[OIUK] human gut metagenome; human gut
502
429
-
Pro
CGG
[ENA]
¢þ
>WENV182502555
OIUK01000546
[OIUK] human gut metagenome; human gut
502
574
+
Arg
CCT
[ENA]
¢þ
>WENV182502560
OIUK01000686
[OIUK] human gut metagenome; human gut
514
442
-
Arg
CCG
[ENA]
¢þ
>WENV182502596
OIUK01004450
[OIUK] human gut metagenome; human gut
520
606
+
Leu
CAG
[ENA]
¢þ
>WENV182502620
OIUK01008812
[OIUK] human gut metagenome; human gut
542
467
-
Val
TAC
[ENA]
¢þ
>WENV182502599
OIUK01004584
[OIUK] human gut metagenome; human gut
565
492
-
Pro
CGG
[ENA]
¢þ
>WENV182502578
OIUK01002187
[OIUK] human gut metagenome; human gut
576
503
-
Ala
CGC
[ENA]
¢þ
>WENV182502608
OIUK01006088
[OIUK] human gut metagenome; human gut
602
677
+
Thr
CGT
[ENA]
¢þ
>WENV182502611
OIUK01006661
[OIUK] human gut metagenome; human gut
620
704
+
Leu
CAA
[ENA]
¢þ
>WENV182502558
OIUK01000605
[OIUK] human gut metagenome; human gut
650
577
-
Lys
CTT
[ENA]
¢þ
>WENV182502579
OIUK01002214
[OIUK] human gut metagenome; human gut
661
588
-
Gly
CCC
[ENA]
¢þ
>WENV182502544
OIUK01000163
[OIUK] human gut metagenome; human gut
662
580
-
Leu
TAG
[ENA]
¢þ
>WENV182502598
OIUK01004584
[OIUK] human gut metagenome; human gut
668
595
-
Gln
CTG
[ENA]
¢þ
>WENV182502547
OIUK01000226
[OIUK] human gut metagenome; human gut
674
749
+
Ile2
CAT
[ENA]
¢þ
>WENV182502580
OIUK01002254
[OIUK] human gut metagenome; human gut
685
602
-
Tyr
GTA
[ENA]
¢þ
>WENV182502550
OIUK01000310
[OIUK] human gut metagenome; human gut
686
612
-
Asn
GTT
[ENA]
¢þ
>WENV182502613
OIUK01006740
[OIUK] human gut metagenome; human gut
697
613
-
Leu
TAA
[ENA]
¢þ
>WENV182502589
OIUK01003344
[OIUK] human gut metagenome; human gut
710
626
-
Leu
CAA
[ENA]
¢þ
>WENV182502587
OIUK01003274
[OIUK] human gut metagenome; human gut
738
814
+
Pro
GGG
[ENA]
¢þ
>WENV182502606
OIUK01005842
[OIUK] human gut metagenome; human gut
741
654
-
Ser
TGA
[ENA]
¢þ
>WENV182502595
OIUK01004251
[OIUK] human gut metagenome; human gut
818
891
+
Gly
CCC
[ENA]
¢þ
>WENV182502603
OIUK01005301
[OIUK] human gut metagenome; human gut
821
903
+
Leu
TAG
[ENA]
¢þ
>WENV182502562
OIUK01000765
[OIUK] human gut metagenome; human gut
867
940
+
fMet
CAT
[ENA]
¢þ
>WENV182502563
OIUK01000939
[OIUK] human gut metagenome; human gut
872
800
-
Arg
CCT
[ENA]
¢þ
>WENV182502554
OIUK01000537
[OIUK] human gut metagenome; human gut
876
964
+
Ser
GGA
[ENA]
¢þ
>WENV182502548
OIUK01000248
[OIUK] human gut metagenome; human gut
894
822
-
Cys
GCA
[ENA]
¢þ
>WENV182502577
OIUK01002024
[OIUK] human gut metagenome; human gut
964
891
-
Trp
CCA
[ENA]
¢þ
>WENV182502573
OIUK01001751
[OIUK] human gut metagenome; human gut
980
908
-
Glu
CTC
[ENA]
¢þ
>WENV182502593
OIUK01003868
[OIUK] human gut metagenome; human gut
1034
1126
+
Ser
GCT
[ENA]
¢þ
>WENV182502597
OIUK01004476
[OIUK] human gut metagenome; human gut
1043
969
-
Arg
TCT
[ENA]
¢þ
>WENV182502594
OIUK01003987
[OIUK] human gut metagenome; human gut
1082
997
-
Leu
TAA
[ENA]
¢þ
>WENV182502565
OIUK01001539
[OIUK] human gut metagenome; human gut
1084
1013
-
Gln
TTG
[ENA]
¢þ
>WENV182502559
OIUK01000661
[OIUK] human gut metagenome; human gut
1095
1167
+
Glu
TTC
[ENA]
¢þ
>WENV182502572
OIUK01001751
[OIUK] human gut metagenome; human gut
1145
1058
-
Ser
GCT
[ENA]
¢þ
>WENV182502590
OIUK01003410
[OIUK] human gut metagenome; human gut
1175
1101
-
Cys
GCA
[ENA]
¢þ
>WENV182502586
OIUK01003034
[OIUK] human gut metagenome; human gut
1184
1260
+
Pro
CGG
[ENA]
¢þ
>WENV182502576
OIUK01001871
[OIUK] human gut metagenome; human gut
1217
1298
+
Leu
TAG
[ENA]
¢þ
>WENV182502568
OIUK01001727
[OIUK] human gut metagenome; human gut
1218
1143
-
His
GTG
[ENA]
¢þ
>WENV182502584
OIUK01002787
[OIUK] human gut metagenome; human gut
1233
1140
-
Ser
GCT
[ENA]
¢þ
>WENV182502551
OIUK01000329
[OIUK] human gut metagenome; human gut
1294
1218
-
Asn
GTT
[ENA]
¢þ
>WENV182502537
OIUK01000074
[OIUK] human gut metagenome; human gut
1314
1398
+
Leu
CAA
[ENA]
¢þ
>WENV182502575
OIUK01001758
[OIUK] human gut metagenome; human gut
1333
1258
-
Lys
CTT
[ENA]
¢þ
>WENV182502583
OIUK01002787
[OIUK] human gut metagenome; human gut
1353
1266
-
Ser
TGA
[ENA]
¢þ
>WENV182502567
OIUK01001637
[OIUK] human gut metagenome; human gut
1379
1464
+
Ser
TGA
[ENA]
¢þ
>WENV182502571
OIUK01001748
[OIUK] human gut metagenome; human gut
1398
1323
-
Thr
GGT
[ENA]
¢þ
>WENV182502582
OIUK01002459
[OIUK] human gut metagenome; human gut
1409
1484
+
Arg
TCT
[ENA]
¢þ
>WENV182502574
OIUK01001758
[OIUK] human gut metagenome; human gut
1411
1337
-
Glu
CTC
[ENA]
¢þ
>WENV182502570
OIUK01001748
[OIUK] human gut metagenome; human gut
1479
1405
-
Gly
TCC
[ENA]
¢þ
>WENV182502581
OIUK01002334
[OIUK] human gut metagenome; human gut
1506
1432
-
Asp
GTC
[ENA]
¢þ
>WENV182502569
OIUK01001748
[OIUK] human gut metagenome; human gut
1558
1483
-
Thr
TGT
[ENA]
¢þ
>WENV182502549
OIUK01000291
[OIUK] human gut metagenome; human gut
1619
1693
+
Asn
GTT
[ENA]
¢þ
>WENV182502556
OIUK01000550
[OIUK] human gut metagenome; human gut
1667
1741
+
Ile
GAT
[ENA]
¢þ
>WENV182502557
OIUK01000550
[OIUK] human gut metagenome; human gut
1758
1832
+
Ala
TGC
[ENA]
¢þ
>WENV182502534
OIUK01000027
[OIUK] human gut metagenome; human gut
2183
2254
+
Gln
TTG
[ENA]
¢þ
>WENV182502545
OIUK01000189
[OIUK] human gut metagenome; human gut
2314
2241
-
Phe
GAA
[ENA]
¢þ
>WENV182502564
OIUK01000986
[OIUK] human gut metagenome; human gut
2438
2363
-
Lys
TTT
[ENA]
¢þ
>WENV182502535
OIUK01000041
[OIUK] human gut metagenome; human gut
2645
2720
+
Glu
TTC
[ENA]
¢þ
>WENV182502561
OIUK01000750
[OIUK] human gut metagenome; human gut
2731
2657
-
Ala
GGC
[ENA]
¢þ
>WENV182502546
OIUK01000219
[OIUK] human gut metagenome; human gut
2997
2924
-
Lys
TTT
[ENA]
¢þ
>WENV182502542
OIUK01000107
[OIUK] human gut metagenome; human gut
3000
2925
-
Pro
GGG
[ENA]
¢þ
>WENV182502553
OIUK01000415
[OIUK] human gut metagenome; human gut
3281
3354
+
Gly
CCC
[ENA]
¢þ
>WENV182502552
OIUK01000354
[OIUK] human gut metagenome; human gut
3447
3521
+
Met
CAT
[ENA]
¢þ
>WENV182502539
OIUK01000104
[OIUK] human gut metagenome; human gut
3471
3545
+
Thr
TGT
[ENA]
¢þ
>WENV182502540
OIUK01000104
[OIUK] human gut metagenome; human gut
3619
3702
+
Tyr
GTA
[ENA]
¢þ
>WENV182502541
OIUK01000104
[OIUK] human gut metagenome; human gut
3816
3888
+
Thr
GGT
[ENA]
¢þ
>WENV182502543
OIUK01000120
[OIUK] human gut metagenome; human gut
4264
4338
+
Ile2
CAT
[ENA]
¢þ
>WENV182502536
OIUK01000041
[OIUK] human gut metagenome; human gut
6083
6159
+
Asp
GTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK