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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OJMR] metagenome; unknown
HIT:
6 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182664970
OJMR01001028
[OJMR] metagenome; unknown
102
29
-
Gly
GCC
[ENA]
¢þ
>WENV182664968
OJMR01000314
[OJMR] metagenome; unknown
147
219
+
Thr
GGT
[ENA]
¢þ
>WENV182664969
OJMR01000491
[OJMR] metagenome; unknown
161
235
+
His
GTG
[ENA]
¢þ
>WENV182664967
OJMR01000298
[OJMR] metagenome; unknown
855
781
-
Ile2
CAT
[ENA]
¢þ
>WENV182664966
OJMR01000002
[OJMR] metagenome; unknown
3636
3562
-
Ala
TGC
[ENA]
¢þ
>WENV182664965
OJMR01000002
[OJMR] metagenome; unknown
3741
3665
-
Ile
GAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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