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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA gene List
[OJTB] human gut metagenome; human gut
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182797756
OJTB01000621
[OJTB] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182797781
OJTB01001867
[OJTB] human gut metagenome; human gut
60
133
+
Thr
TGT
[ENA]
¢þ
>WENV182797731
OJTB01000038
[OJTB] human gut metagenome; human gut
70
146
+
Val
GAC
[ENA]
¢þ
>WENV182797774
OJTB01001233
[OJTB] human gut metagenome; human gut
93
166
+
Arg
CCT
[ENA]
¢þ
>WENV182797722
OJTB01000029
[OJTB] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182797765
OJTB01000727
[OJTB] human gut metagenome; human gut
121
195
+
Thr
GGT
[ENA]
¢þ
>WENV182797741
OJTB01000103
[OJTB] human gut metagenome; human gut
128
200
+
Ala
TGC
[ENA]
¢þ
>WENV182797696
OJTB01000012
[OJTB] human gut metagenome; human gut
132
57
-
Val
TAC
[ENA]
¢þ
>WENV182797751
OJTB01000104
[OJTB] human gut metagenome; human gut
133
59
-
Gly
TCC
[ENA]
¢þ
>WENV182797783
OJTB01002137
[OJTB] human gut metagenome; human gut
134
207
+
Lys
TTT
[ENA]
¢þ
>WENV182797773
OJTB01000943
[OJTB] human gut metagenome; human gut
155
70
-
Leu
CAA
[ENA]
¢þ
>WENV182797757
OJTB01000621
[OJTB] human gut metagenome; human gut
176
266
+
Ser
GGA
[ENA]
¢þ
>WENV182797772
OJTB01000943
[OJTB] human gut metagenome; human gut
238
168
-
Cys
GCA
[ENA]
¢þ
>WENV182797778
OJTB01001825
[OJTB] human gut metagenome; human gut
254
329
+
Glu
TTC
[ENA]
¢þ
>WENV182797766
OJTB01000727
[OJTB] human gut metagenome; human gut
263
337
+
Met
CAT
[ENA]
¢þ
>WENV182797780
OJTB01001840
[OJTB] human gut metagenome; human gut
281
207
-
Ile2
CAT
[ENA]
¢þ
>WENV182797758
OJTB01000621
[OJTB] human gut metagenome; human gut
282
355
+
Glu
TTC
[ENA]
¢þ
>WENV182797695
OJTB01000012
[OJTB] human gut metagenome; human gut
335
260
-
Lys
TTT
[ENA]
¢þ
>WENV182797771
OJTB01000943
[OJTB] human gut metagenome; human gut
336
263
-
Gln
TTG
[ENA]
¢þ
>WENV182797750
OJTB01000104
[OJTB] human gut metagenome; human gut
337
253
-
Tyr
GTA
[ENA]
¢þ
>WENV182797759
OJTB01000621
[OJTB] human gut metagenome; human gut
367
456
+
Ser
TGA
[ENA]
¢þ
>WENV182797770
OJTB01000943
[OJTB] human gut metagenome; human gut
422
349
-
His
GTG
[ENA]
¢þ
>WENV182797749
OJTB01000104
[OJTB] human gut metagenome; human gut
423
348
-
Thr
TGT
[ENA]
¢þ
>WENV182797782
OJTB01002061
[OJTB] human gut metagenome; human gut
435
349
-
Ser
TGA
[ENA]
¢þ
>WENV182797776
OJTB01001781
[OJTB] human gut metagenome; human gut
448
521
+
Ala
CGC
[ENA]
¢þ
>WENV182797777
OJTB01001823
[OJTB] human gut metagenome; human gut
463
389
-
Leu
TAA
[ENA]
¢þ
>WENV182797760
OJTB01000621
[OJTB] human gut metagenome; human gut
489
564
+
fMet
CAT
[ENA]
¢þ
>WENV182797779
OJTB01001840
[OJTB] human gut metagenome; human gut
503
430
-
Asn
GTT
[ENA]
¢þ
>WENV182797769
OJTB01000943
[OJTB] human gut metagenome; human gut
532
459
-
Trp
CCA
[ENA]
¢þ
>WENV182797775
OJTB01001679
[OJTB] human gut metagenome; human gut
547
472
-
Thr
CGT
[ENA]
¢þ
>WENV182797767
OJTB01000727
[OJTB] human gut metagenome; human gut
547
620
+
Trp
CCA
[ENA]
¢þ
>WENV182797761
OJTB01000621
[OJTB] human gut metagenome; human gut
602
678
+
Asp
GTC
[ENA]
¢þ
>WENV182797768
OJTB01000943
[OJTB] human gut metagenome; human gut
618
536
-
Tyr
GTA
[ENA]
¢þ
>WENV182797762
OJTB01000621
[OJTB] human gut metagenome; human gut
680
750
+
Gly
TCC
[ENA]
¢þ
>WENV182797763
OJTB01000621
[OJTB] human gut metagenome; human gut
764
837
+
Ile
GAT
[ENA]
¢þ
>WENV182797764
OJTB01000621
[OJTB] human gut metagenome; human gut
847
936
+
Ser
GCT
[ENA]
¢þ
>WENV182797755
OJTB01000387
[OJTB] human gut metagenome; human gut
858
783
-
Ala
TGC
[ENA]
¢þ
>WENV182797754
OJTB01000387
[OJTB] human gut metagenome; human gut
1044
968
-
Ile
GAT
[ENA]
¢þ
>WENV182797753
OJTB01000130
[OJTB] human gut metagenome; human gut
1411
1338
-
Phe
GAA
[ENA]
¢þ
>WENV182797752
OJTB01000125
[OJTB] human gut metagenome; human gut
2186
2111
-
Ala
TGC
[ENA]
¢þ
>WENV182797742
OJTB01000103
[OJTB] human gut metagenome; human gut
3515
3589
+
Val
TAC
[ENA]
¢þ
>WENV182797743
OJTB01000103
[OJTB] human gut metagenome; human gut
3594
3668
+
Lys
TTT
[ENA]
¢þ
>WENV182797744
OJTB01000103
[OJTB] human gut metagenome; human gut
3683
3766
+
Leu
TAG
[ENA]
¢þ
>WENV182797745
OJTB01000103
[OJTB] human gut metagenome; human gut
3772
3847
+
Thr
TGT
[ENA]
¢þ
>WENV182797746
OJTB01000103
[OJTB] human gut metagenome; human gut
3852
3923
+
Gly
GCC
[ENA]
¢þ
>WENV182797747
OJTB01000103
[OJTB] human gut metagenome; human gut
3939
4027
+
Leu
TAA
[ENA]
¢þ
>WENV182797748
OJTB01000103
[OJTB] human gut metagenome; human gut
4038
4114
+
Ile2
CAT
[ENA]
¢þ
>WENV182797737
OJTB01000065
[OJTB] human gut metagenome; human gut
4358
4431
+
Asn
GTT
[ENA]
¢þ
>WENV182797711
OJTB01000017
[OJTB] human gut metagenome; human gut
5803
5717
-
Ser
TGA
[ENA]
¢þ
>WENV182797738
OJTB01000083
[OJTB] human gut metagenome; human gut
14302
14394
+
Ser
GCT
[ENA]
¢þ
>WENV182797736
OJTB01000061
[OJTB] human gut metagenome; human gut
14327
14252
-
Pro
CGG
[ENA]
¢þ
>WENV182797739
OJTB01000083
[OJTB] human gut metagenome; human gut
14399
14475
+
Arg
ACG
[ENA]
¢þ
>WENV182797740
OJTB01000083
[OJTB] human gut metagenome; human gut
14536
14612
+
Arg
ACG
[ENA]
¢þ
>WENV182797712
OJTB01000018
[OJTB] human gut metagenome; human gut
19724
19811
+
Ser
TGA
[ENA]
¢þ
>WENV182797718
OJTB01000024
[OJTB] human gut metagenome; human gut
30080
30155
+
Thr
CGT
[ENA]
¢þ
>WENV182797710
OJTB01000017
[OJTB] human gut metagenome; human gut
31832
31747
-
Ser
CGA
[ENA]
¢þ
>WENV182797697
OJTB01000013
[OJTB] human gut metagenome; human gut
32199
32273
+
Arg
TCT
[ENA]
¢þ
>WENV182797661
OJTB01000005
[OJTB] human gut metagenome; human gut
36529
36602
+
Glu
CTC
[ENA]
¢þ
>WENV182797662
OJTB01000005
[OJTB] human gut metagenome; human gut
36641
36715
+
Gln
CTG
[ENA]
¢þ
>WENV182797670
OJTB01000005
[OJTB] human gut metagenome; human gut
38107
38019
-
Ser
GGA
[ENA]
¢þ
>WENV182797734
OJTB01000055
[OJTB] human gut metagenome; human gut
40680
40606
-
Pro
GGG
[ENA]
¢þ
>WENV182797721
OJTB01000027
[OJTB] human gut metagenome; human gut
40774
40862
+
Leu
GAG
[ENA]
¢þ
>WENV182797735
OJTB01000058
[OJTB] human gut metagenome; human gut
41009
41085
+
Pro
GGG
[ENA]
¢þ
>WENV182797678
OJTB01000009
[OJTB] human gut metagenome; human gut
42484
42565
+
Leu
TAA
[ENA]
¢þ
>WENV182797723
OJTB01000029
[OJTB] human gut metagenome; human gut
45476
45552
+
Arg
CCG
[ENA]
¢þ
>WENV182797724
OJTB01000029
[OJTB] human gut metagenome; human gut
45608
45683
+
His
GTG
[ENA]
¢þ
>WENV182797729
OJTB01000034
[OJTB] human gut metagenome; human gut
45670
45597
-
Gly
CCC
[ENA]
¢þ
>WENV182797725
OJTB01000029
[OJTB] human gut metagenome; human gut
45706
45792
+
Leu
CAG
[ENA]
¢þ
>WENV182797726
OJTB01000029
[OJTB] human gut metagenome; human gut
45838
45914
+
Pro
TGG
[ENA]
¢þ
>WENV182797733
OJTB01000050
[OJTB] human gut metagenome; human gut
49912
49985
+
Gly
CCC
[ENA]
¢þ
>WENV182797728
OJTB01000034
[OJTB] human gut metagenome; human gut
55808
55893
+
Leu
CAG
[ENA]
¢þ
>WENV182797677
OJTB01000008
[OJTB] human gut metagenome; human gut
58479
58404
-
Ile2
CAT
[ENA]
¢þ
>WENV182797663
OJTB01000005
[OJTB] human gut metagenome; human gut
62240
62313
+
Lys
TTT
[ENA]
¢þ
>WENV182797716
OJTB01000022
[OJTB] human gut metagenome; human gut
63008
62932
-
fMet
CAT
[ENA]
¢þ
>WENV182797715
OJTB01000022
[OJTB] human gut metagenome; human gut
64900
64814
-
Leu
GAG
[ENA]
¢þ
>WENV182797660
OJTB01000004
[OJTB] human gut metagenome; human gut
65418
65342
-
Arg
TCT
[ENA]
¢þ
>WENV182797730
OJTB01000035
[OJTB] human gut metagenome; human gut
72941
73016
+
Trp
CCA
[ENA]
¢þ
>WENV182797684
OJTB01000010
[OJTB] human gut metagenome; human gut
79215
79289
+
Thr
TGT
[ENA]
¢þ
>WENV182797709
OJTB01000017
[OJTB] human gut metagenome; human gut
81774
81687
-
Ser
GCT
[ENA]
¢þ
>WENV182797645
OJTB01000001
[OJTB] human gut metagenome; human gut
81883
81967
+
Tyr
GTA
[ENA]
¢þ
>WENV182797646
OJTB01000001
[OJTB] human gut metagenome; human gut
82003
82087
+
Tyr
GTA
[ENA]
¢þ
>WENV182797732
OJTB01000040
[OJTB] human gut metagenome; human gut
85911
85987
+
Val
GAC
[ENA]
¢þ
>WENV182797664
OJTB01000005
[OJTB] human gut metagenome; human gut
85933
86007
+
Lys
CTT
[ENA]
¢þ
>WENV182797699
OJTB01000013
[OJTB] human gut metagenome; human gut
88960
88885
-
His
GTG
[ENA]
¢þ
>WENV182797720
OJTB01000024
[OJTB] human gut metagenome; human gut
89869
89793
-
Asp
GTC
[ENA]
¢þ
>WENV182797708
OJTB01000017
[OJTB] human gut metagenome; human gut
90957
90883
-
Met
CAT
[ENA]
¢þ
>WENV182797707
OJTB01000017
[OJTB] human gut metagenome; human gut
91116
91034
-
Tyr
GTA
[ENA]
¢þ
>WENV182797717
OJTB01000023
[OJTB] human gut metagenome; human gut
92469
92393
-
Pro
CGG
[ENA]
¢þ
>WENV182797727
OJTB01000030
[OJTB] human gut metagenome; human gut
93098
93171
+
Asn
GTT
[ENA]
¢þ
>WENV182797688
OJTB01000012
[OJTB] human gut metagenome; human gut
93724
93800
+
Met
CAT
[ENA]
¢þ
>WENV182797689
OJTB01000012
[OJTB] human gut metagenome; human gut
93809
93893
+
Leu
TAG
[ENA]
¢þ
>WENV182797690
OJTB01000012
[OJTB] human gut metagenome; human gut
93931
94005
+
Gln
TTG
[ENA]
¢þ
>WENV182797691
OJTB01000012
[OJTB] human gut metagenome; human gut
94040
94114
+
Gln
TTG
[ENA]
¢þ
>WENV182797692
OJTB01000012
[OJTB] human gut metagenome; human gut
94136
94212
+
Met
CAT
[ENA]
¢þ
>WENV182797693
OJTB01000012
[OJTB] human gut metagenome; human gut
94257
94331
+
Gln
CTG
[ENA]
¢þ
>WENV182797694
OJTB01000012
[OJTB] human gut metagenome; human gut
94426
94500
+
Gln
CTG
[ENA]
¢þ
>WENV182797679
OJTB01000009
[OJTB] human gut metagenome; human gut
96647
96721
+
Leu
CAA
[ENA]
¢þ
>WENV182797683
OJTB01000009
[OJTB] human gut metagenome; human gut
106784
106710
-
Pro
TGG
[ENA]
¢þ
>WENV182797703
OJTB01000015
[OJTB] human gut metagenome; human gut
107730
107824
+
SeC
TCA
[ENA]
¢þ
>WENV182797719
OJTB01000024
[OJTB] human gut metagenome; human gut
109390
109314
-
Asp
GTC
[ENA]
¢þ
>WENV182797682
OJTB01000009
[OJTB] human gut metagenome; human gut
114048
113976
-
Gln
TTG
[ENA]
¢þ
>WENV182797714
OJTB01000018
[OJTB] human gut metagenome; human gut
115790
115703
-
Ser
GGA
[ENA]
¢þ
>WENV182797713
OJTB01000018
[OJTB] human gut metagenome; human gut
118763
118676
-
Ser
GGA
[ENA]
¢þ
>WENV182797686
OJTB01000010
[OJTB] human gut metagenome; human gut
120311
120238
-
Ala
TGC
[ENA]
¢þ
>WENV182797685
OJTB01000010
[OJTB] human gut metagenome; human gut
120428
120354
-
Ile
GAT
[ENA]
¢þ
>WENV182797680
OJTB01000009
[OJTB] human gut metagenome; human gut
124658
124731
+
Ala
GGC
[ENA]
¢þ
>WENV182797687
OJTB01000011
[OJTB] human gut metagenome; human gut
129543
129457
-
Leu
CAG
[ENA]
¢þ
>WENV182797659
OJTB01000002
[OJTB] human gut metagenome; human gut
132602
132527
-
Phe
GAA
[ENA]
¢þ
>WENV182797706
OJTB01000017
[OJTB] human gut metagenome; human gut
137076
137002
-
Val
CAC
[ENA]
¢þ
>WENV182797705
OJTB01000017
[OJTB] human gut metagenome; human gut
137196
137124
-
Val
GAC
[ENA]
¢þ
>WENV182797704
OJTB01000017
[OJTB] human gut metagenome; human gut
137315
137242
-
Gly
GCC
[ENA]
¢þ
>WENV182797669
OJTB01000005
[OJTB] human gut metagenome; human gut
139418
139342
-
fMet
CAT
[ENA]
¢þ
>WENV182797700
OJTB01000014
[OJTB] human gut metagenome; human gut
143236
143309
+
Arg
CCT
[ENA]
¢þ
>WENV182797681
OJTB01000009
[OJTB] human gut metagenome; human gut
144451
144525
+
Arg
ACG
[ENA]
¢þ
>WENV182797665
OJTB01000005
[OJTB] human gut metagenome; human gut
154354
154429
+
Arg
CCG
[ENA]
¢þ
>WENV182797698
OJTB01000013
[OJTB] human gut metagenome; human gut
157438
157512
+
Val
TAC
[ENA]
¢þ
>WENV182797702
OJTB01000014
[OJTB] human gut metagenome; human gut
162808
162733
-
Ala
GGC
[ENA]
¢þ
>WENV182797701
OJTB01000014
[OJTB] human gut metagenome; human gut
162925
162850
-
Ala
GGC
[ENA]
¢þ
>WENV182797675
OJTB01000006
[OJTB] human gut metagenome; human gut
167086
167013
-
Arg
CCT
[ENA]
¢þ
>WENV182797655
OJTB01000002
[OJTB] human gut metagenome; human gut
171700
171775
+
Gly
GCC
[ENA]
¢þ
>WENV182797656
OJTB01000002
[OJTB] human gut metagenome; human gut
171920
171995
+
Gly
GCC
[ENA]
¢þ
>WENV182797657
OJTB01000002
[OJTB] human gut metagenome; human gut
172020
172095
+
Gly
GCC
[ENA]
¢þ
>WENV182797676
OJTB01000008
[OJTB] human gut metagenome; human gut
180136
180061
-
Phe
GAA
[ENA]
¢þ
>WENV182797666
OJTB01000005
[OJTB] human gut metagenome; human gut
183952
184025
+
Gly
TCC
[ENA]
¢þ
>WENV182797674
OJTB01000006
[OJTB] human gut metagenome; human gut
202481
202407
-
Ile2
CAT
[ENA]
¢þ
>WENV182797673
OJTB01000006
[OJTB] human gut metagenome; human gut
208263
208187
-
Asp
GTC
[ENA]
¢þ
>WENV182797672
OJTB01000006
[OJTB] human gut metagenome; human gut
233336
233262
-
Asp
GTC
[ENA]
¢þ
>WENV182797668
OJTB01000005
[OJTB] human gut metagenome; human gut
233378
233297
-
Leu
TAG
[ENA]
¢þ
>WENV182797667
OJTB01000005
[OJTB] human gut metagenome; human gut
233545
233472
-
Thr
CGT
[ENA]
¢þ
>WENV182797671
OJTB01000006
[OJTB] human gut metagenome; human gut
234587
234660
+
Glu
TTC
[ENA]
¢þ
>WENV182797654
OJTB01000001
[OJTB] human gut metagenome; human gut
296909
296823
-
Leu
TAA
[ENA]
¢þ
>WENV182797653
OJTB01000001
[OJTB] human gut metagenome; human gut
296996
296923
-
Cys
GCA
[ENA]
¢þ
>WENV182797652
OJTB01000001
[OJTB] human gut metagenome; human gut
297110
297035
-
Gly
GCC
[ENA]
¢þ
>WENV182797658
OJTB01000002
[OJTB] human gut metagenome; human gut
314829
314913
+
Leu
CAA
[ENA]
¢þ
>WENV182797651
OJTB01000001
[OJTB] human gut metagenome; human gut
335246
335157
-
Ser
CGA
[ENA]
¢þ
>WENV182797647
OJTB01000001
[OJTB] human gut metagenome; human gut
336238
336313
+
Asn
GTT
[ENA]
¢þ
>WENV182797650
OJTB01000001
[OJTB] human gut metagenome; human gut
354401
354326
-
Asn
GTT
[ENA]
¢þ
>WENV182797648
OJTB01000001
[OJTB] human gut metagenome; human gut
356177
356252
+
Asn
GTT
[ENA]
¢þ
>WENV182797649
OJTB01000001
[OJTB] human gut metagenome; human gut
380097
380172
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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