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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJTQ] human gut metagenome; human gut
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182799099
OJTQ01000599
[OJTQ] human gut metagenome; human gut
14
99
+
Leu
TAA
[ENA]
¢þ
>WENV182799135
OJTQ01002113
[OJTQ] human gut metagenome; human gut
21
96
+
Thr
TGT
[ENA]
¢þ
>WENV182799116
OJTQ01001169
[OJTQ] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182799096
OJTQ01000370
[OJTQ] human gut metagenome; human gut
69
145
+
Ile2
CAT
[ENA]
¢þ
>WENV182799125
OJTQ01001906
[OJTQ] human gut metagenome; human gut
70
145
+
fMet
CAT
[ENA]
¢þ
>WENV182799092
OJTQ01000329
[OJTQ] human gut metagenome; human gut
87
3
-
Tyr
GTA
[ENA]
¢þ
>WENV182799094
OJTQ01000349
[OJTQ] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182799136
OJTQ01002113
[OJTQ] human gut metagenome; human gut
105
189
+
Tyr
GTA
[ENA]
¢þ
>WENV182799100
OJTQ01000599
[OJTQ] human gut metagenome; human gut
114
187
+
Arg
ACG
[ENA]
¢þ
>WENV182799141
OJTQ01002656
[OJTQ] human gut metagenome; human gut
115
191
+
Ile
GAT
[ENA]
¢þ
>WENV182799140
OJTQ01002637
[OJTQ] human gut metagenome; human gut
139
66
-
Ile2
CAT
[ENA]
¢þ
>WENV182799117
OJTQ01001169
[OJTQ] human gut metagenome; human gut
151
226
+
Asp
GTC
[ENA]
¢þ
>WENV182799126
OJTQ01001906
[OJTQ] human gut metagenome; human gut
153
227
+
Glu
TTC
[ENA]
¢þ
>WENV182799101
OJTQ01000599
[OJTQ] human gut metagenome; human gut
199
272
+
Pro
TGG
[ENA]
¢þ
>WENV182799142
OJTQ01002656
[OJTQ] human gut metagenome; human gut
234
309
+
Ala
TGC
[ENA]
¢þ
>WENV182799127
OJTQ01001906
[OJTQ] human gut metagenome; human gut
242
315
+
Gly
TCC
[ENA]
¢þ
>WENV182799123
OJTQ01001359
[OJTQ] human gut metagenome; human gut
249
322
+
Arg
CCG
[ENA]
¢þ
>WENV182799118
OJTQ01001169
[OJTQ] human gut metagenome; human gut
272
344
+
Phe
GAA
[ENA]
¢þ
>WENV182799137
OJTQ01002113
[OJTQ] human gut metagenome; human gut
306
380
+
Gly
TCC
[ENA]
¢þ
>WENV182799128
OJTQ01001906
[OJTQ] human gut metagenome; human gut
321
396
+
Val
TAC
[ENA]
¢þ
>WENV182799139
OJTQ01002366
[OJTQ] human gut metagenome; human gut
326
397
+
Trp
CCA
[ENA]
¢þ
>WENV182799119
OJTQ01001169
[OJTQ] human gut metagenome; human gut
349
431
+
Tyr
GTA
[ENA]
¢þ
>WENV182799138
OJTQ01002113
[OJTQ] human gut metagenome; human gut
387
462
+
Thr
GGT
[ENA]
¢þ
>WENV182799129
OJTQ01001906
[OJTQ] human gut metagenome; human gut
402
478
+
Asp
GTC
[ENA]
¢þ
>WENV182799120
OJTQ01001169
[OJTQ] human gut metagenome; human gut
439
512
+
Gln
TTG
[ENA]
¢þ
>WENV182799130
OJTQ01001906
[OJTQ] human gut metagenome; human gut
489
563
+
Thr
TGT
[ENA]
¢þ
>WENV182799124
OJTQ01001564
[OJTQ] human gut metagenome; human gut
496
421
-
Phe
GAA
[ENA]
¢þ
>WENV182799132
OJTQ01001999
[OJTQ] human gut metagenome; human gut
540
632
+
Ser
GCT
[ENA]
¢þ
>WENV182799131
OJTQ01001906
[OJTQ] human gut metagenome; human gut
578
662
+
Tyr
GTA
[ENA]
¢þ
>WENV182799133
OJTQ01001999
[OJTQ] human gut metagenome; human gut
636
712
+
Arg
ACG
[ENA]
¢þ
>WENV182799134
OJTQ01002101
[OJTQ] human gut metagenome; human gut
664
577
-
Ser
GGA
[ENA]
¢þ
>WENV182799115
OJTQ01001094
[OJTQ] human gut metagenome; human gut
984
1073
+
Ser
CGA
[ENA]
¢þ
>WENV182799121
OJTQ01001235
[OJTQ] human gut metagenome; human gut
1241
1315
+
Asn
GTT
[ENA]
¢þ
>WENV182799122
OJTQ01001235
[OJTQ] human gut metagenome; human gut
1321
1407
+
Leu
TAA
[ENA]
¢þ
>WENV182799113
OJTQ01000762
[OJTQ] human gut metagenome; human gut
1421
1497
+
Val
GAC
[ENA]
¢þ
>WENV182799114
OJTQ01000762
[OJTQ] human gut metagenome; human gut
1502
1578
+
Val
GAC
[ENA]
¢þ
>WENV182799098
OJTQ01000464
[OJTQ] human gut metagenome; human gut
1790
1865
+
Asn
GTT
[ENA]
¢þ
>WENV182799090
OJTQ01000295
[OJTQ] human gut metagenome; human gut
1866
1790
-
Asp
GTC
[ENA]
¢þ
>WENV182799112
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2375
2302
-
Glu
TTC
[ENA]
¢þ
>WENV182799111
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2478
2389
-
Ser
GCT
[ENA]
¢þ
>WENV182799078
OJTQ01000159
[OJTQ] human gut metagenome; human gut
2535
2610
+
Asn
GTT
[ENA]
¢þ
>WENV182799110
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2561
2488
-
Ile
GAT
[ENA]
¢þ
>WENV182799109
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2645
2575
-
Gly
TCC
[ENA]
¢þ
>WENV182799108
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2733
2656
-
Phe
GAA
[ENA]
¢þ
>WENV182799107
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2812
2737
-
Asp
GTC
[ENA]
¢þ
>WENV182799106
OJTQ01000662
[OJTQ] human gut metagenome; human gut
2934
2859
-
fMet
CAT
[ENA]
¢þ
>WENV182799105
OJTQ01000662
[OJTQ] human gut metagenome; human gut
3056
2967
-
Ser
TGA
[ENA]
¢þ
>WENV182799104
OJTQ01000662
[OJTQ] human gut metagenome; human gut
3164
3089
-
Ile2
CAT
[ENA]
¢þ
>WENV182799103
OJTQ01000662
[OJTQ] human gut metagenome; human gut
3258
3183
-
Met
CAT
[ENA]
¢þ
>WENV182799102
OJTQ01000662
[OJTQ] human gut metagenome; human gut
3352
3280
-
Ala
TGC
[ENA]
¢þ
>WENV182799086
OJTQ01000236
[OJTQ] human gut metagenome; human gut
4068
3982
-
Leu
GAG
[ENA]
¢þ
>WENV182799093
OJTQ01000333
[OJTQ] human gut metagenome; human gut
4413
4488
+
Ile2
CAT
[ENA]
¢þ
>WENV182799097
OJTQ01000370
[OJTQ] human gut metagenome; human gut
5209
5284
+
Asn
GTT
[ENA]
¢þ
>WENV182799063
OJTQ01000061
[OJTQ] human gut metagenome; human gut
5289
5203
-
Leu
TAA
[ENA]
¢þ
>WENV182799062
OJTQ01000061
[OJTQ] human gut metagenome; human gut
5375
5302
-
Cys
GCA
[ENA]
¢þ
>WENV182799061
OJTQ01000061
[OJTQ] human gut metagenome; human gut
5504
5429
-
Gly
GCC
[ENA]
¢þ
>WENV182799076
OJTQ01000145
[OJTQ] human gut metagenome; human gut
6467
6378
-
Ser
CGA
[ENA]
¢þ
>WENV182799082
OJTQ01000177
[OJTQ] human gut metagenome; human gut
7405
7329
-
Pro
TGG
[ENA]
¢þ
>WENV182799075
OJTQ01000145
[OJTQ] human gut metagenome; human gut
7459
7534
+
Asn
GTT
[ENA]
¢þ
>WENV182799095
OJTQ01000359
[OJTQ] human gut metagenome; human gut
7465
7390
-
Thr
CGT
[ENA]
¢þ
>WENV182799081
OJTQ01000177
[OJTQ] human gut metagenome; human gut
7534
7448
-
Leu
CAG
[ENA]
¢þ
>WENV182799080
OJTQ01000177
[OJTQ] human gut metagenome; human gut
7630
7555
-
His
GTG
[ENA]
¢þ
>WENV182799088
OJTQ01000259
[OJTQ] human gut metagenome; human gut
7742
7818
+
Arg
TCT
[ENA]
¢þ
>WENV182799079
OJTQ01000177
[OJTQ] human gut metagenome; human gut
7765
7689
-
Arg
CCG
[ENA]
¢þ
>WENV182799089
OJTQ01000282
[OJTQ] human gut metagenome; human gut
8202
8278
+
Asp
GTC
[ENA]
¢þ
>WENV182799043
OJTQ01000022
[OJTQ] human gut metagenome; human gut
8613
8688
+
Phe
GAA
[ENA]
¢þ
>WENV182799091
OJTQ01000328
[OJTQ] human gut metagenome; human gut
9486
9411
-
Trp
CCA
[ENA]
¢þ
>WENV182799087
OJTQ01000238
[OJTQ] human gut metagenome; human gut
10553
10639
+
Leu
GAG
[ENA]
¢þ
>WENV182799083
OJTQ01000221
[OJTQ] human gut metagenome; human gut
12409
12336
-
Gly
CCC
[ENA]
¢þ
>WENV182799073
OJTQ01000136
[OJTQ] human gut metagenome; human gut
14339
14415
+
fMet
CAT
[ENA]
¢þ
>WENV182799085
OJTQ01000232
[OJTQ] human gut metagenome; human gut
14630
14556
-
Gln
CTG
[ENA]
¢þ
>WENV182799084
OJTQ01000232
[OJTQ] human gut metagenome; human gut
14742
14668
-
Gln
CTG
[ENA]
¢þ
>WENV182799058
OJTQ01000052
[OJTQ] human gut metagenome; human gut
15065
14989
-
Val
GAC
[ENA]
¢þ
>WENV182799057
OJTQ01000052
[OJTQ] human gut metagenome; human gut
15146
15070
-
Val
GAC
[ENA]
¢þ
>WENV182799055
OJTQ01000047
[OJTQ] human gut metagenome; human gut
16974
16899
-
Asn
GTT
[ENA]
¢þ
>WENV182799044
OJTQ01000025
[OJTQ] human gut metagenome; human gut
17805
17730
-
Phe
GAA
[ENA]
¢þ
>WENV182799049
OJTQ01000042
[OJTQ] human gut metagenome; human gut
18156
18080
-
Arg
TCT
[ENA]
¢þ
>WENV182799054
OJTQ01000047
[OJTQ] human gut metagenome; human gut
19383
19308
-
Asn
GTT
[ENA]
¢þ
>WENV182799077
OJTQ01000158
[OJTQ] human gut metagenome; human gut
19503
19428
-
Thr
CGT
[ENA]
¢þ
>WENV182799066
OJTQ01000066
[OJTQ] human gut metagenome; human gut
21128
21203
+
Phe
GAA
[ENA]
¢þ
>WENV182799053
OJTQ01000047
[OJTQ] human gut metagenome; human gut
21132
21207
+
Asn
GTT
[ENA]
¢þ
>WENV182799064
OJTQ01000062
[OJTQ] human gut metagenome; human gut
21150
21226
+
Pro
CGG
[ENA]
¢þ
>WENV182799056
OJTQ01000049
[OJTQ] human gut metagenome; human gut
23504
23429
-
Thr
TGT
[ENA]
¢þ
>WENV182799074
OJTQ01000140
[OJTQ] human gut metagenome; human gut
24385
24299
-
Leu
CAG
[ENA]
¢þ
>WENV182799060
OJTQ01000061
[OJTQ] human gut metagenome; human gut
26705
26616
-
Ser
CGA
[ENA]
¢þ
>WENV182799072
OJTQ01000109
[OJTQ] human gut metagenome; human gut
26953
26866
-
Ser
TGA
[ENA]
¢þ
>WENV182799059
OJTQ01000061
[OJTQ] human gut metagenome; human gut
27697
27772
+
Asn
GTT
[ENA]
¢þ
>WENV182799067
OJTQ01000078
[OJTQ] human gut metagenome; human gut
28592
28666
+
Arg
CCT
[ENA]
¢þ
>WENV182799041
OJTQ01000019
[OJTQ] human gut metagenome; human gut
28701
28795
+
SeC
TCA
[ENA]
¢þ
>WENV182799068
OJTQ01000080
[OJTQ] human gut metagenome; human gut
30025
30100
+
Gly
GCC
[ENA]
¢þ
>WENV182799069
OJTQ01000080
[OJTQ] human gut metagenome; human gut
30136
30211
+
Gly
GCC
[ENA]
¢þ
>WENV182799070
OJTQ01000080
[OJTQ] human gut metagenome; human gut
30247
30322
+
Gly
GCC
[ENA]
¢þ
>WENV182799071
OJTQ01000080
[OJTQ] human gut metagenome; human gut
30358
30433
+
Gly
GCC
[ENA]
¢þ
>WENV182799046
OJTQ01000039
[OJTQ] human gut metagenome; human gut
30594
30668
+
Arg
CCT
[ENA]
¢þ
>WENV182799035
OJTQ01000002
[OJTQ] human gut metagenome; human gut
30750
30826
+
Pro
GGG
[ENA]
¢þ
>WENV182799039
OJTQ01000008
[OJTQ] human gut metagenome; human gut
41589
41513
-
Pro
CGG
[ENA]
¢þ
>WENV182799065
OJTQ01000064
[OJTQ] human gut metagenome; human gut
42564
42648
+
Leu
CAA
[ENA]
¢þ
>WENV182799045
OJTQ01000029
[OJTQ] human gut metagenome; human gut
44881
44956
+
Ile2
CAT
[ENA]
¢þ
>WENV182799050
OJTQ01000046
[OJTQ] human gut metagenome; human gut
47189
47264
+
Gly
GCC
[ENA]
¢þ
>WENV182799051
OJTQ01000046
[OJTQ] human gut metagenome; human gut
47318
47391
+
Cys
GCA
[ENA]
¢þ
>WENV182799052
OJTQ01000046
[OJTQ] human gut metagenome; human gut
47404
47490
+
Leu
TAA
[ENA]
¢þ
>WENV182799048
OJTQ01000039
[OJTQ] human gut metagenome; human gut
51070
50995
-
Ala
GGC
[ENA]
¢þ
>WENV182799047
OJTQ01000039
[OJTQ] human gut metagenome; human gut
51185
51110
-
Ala
GGC
[ENA]
¢þ
>WENV182799036
OJTQ01000003
[OJTQ] human gut metagenome; human gut
51354
51281
-
Gly
CCC
[ENA]
¢þ
>WENV182799037
OJTQ01000004
[OJTQ] human gut metagenome; human gut
52901
52988
+
Ser
TGA
[ENA]
¢þ
>WENV182799042
OJTQ01000021
[OJTQ] human gut metagenome; human gut
53971
53896
-
Phe
GAA
[ENA]
¢þ
>WENV182799040
OJTQ01000010
[OJTQ] human gut metagenome; human gut
62028
61934
-
SeC
TCA
[ENA]
¢þ
>WENV182799038
OJTQ01000005
[OJTQ] human gut metagenome; human gut
102170
102246
+
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK