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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OJVG] human gut metagenome; human gut
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182805639
OJVG01000026
[OJVG] human gut metagenome; human gut
97
22
-
Ile2
CAT
[ENA]
¢þ
>WENV182805664
OJVG01000489
[OJVG] human gut metagenome; human gut
141
66
-
Thr
TGT
[ENA]
¢þ
>WENV182805662
OJVG01000398
[OJVG] human gut metagenome; human gut
151
227
+
Arg
ACG
[ENA]
¢þ
>WENV182805648
OJVG01000135
[OJVG] human gut metagenome; human gut
153
78
-
His
GTG
[ENA]
¢þ
>WENV182805637
OJVG01000004
[OJVG] human gut metagenome; human gut
174
98
-
Pro
CGG
[ENA]
¢þ
>WENV182805671
OJVG01001009
[OJVG] human gut metagenome; human gut
273
197
-
Arg
ACG
[ENA]
¢þ
>WENV182805647
OJVG01000135
[OJVG] human gut metagenome; human gut
285
209
-
Arg
CCG
[ENA]
¢þ
>WENV182805666
OJVG01000548
[OJVG] human gut metagenome; human gut
296
212
-
Tyr
GTA
[ENA]
¢þ
>WENV182805670
OJVG01001009
[OJVG] human gut metagenome; human gut
370
278
-
Ser
GCT
[ENA]
¢þ
>WENV182805674
OJVG01001254
[OJVG] human gut metagenome; human gut
416
342
-
Arg
CCT
[ENA]
¢þ
>WENV182805673
OJVG01001193
[OJVG] human gut metagenome; human gut
613
689
+
fMet
CAT
[ENA]
¢þ
>WENV182805672
OJVG01001078
[OJVG] human gut metagenome; human gut
971
895
-
Pro
TGG
[ENA]
¢þ
>WENV182805669
OJVG01000841
[OJVG] human gut metagenome; human gut
1216
1141
-
Thr
CGT
[ENA]
¢þ
>WENV182805663
OJVG01000486
[OJVG] human gut metagenome; human gut
1654
1580
-
Gly
TCC
[ENA]
¢þ
>WENV182805665
OJVG01000539
[OJVG] human gut metagenome; human gut
1862
1775
-
Ser
TGA
[ENA]
¢þ
>WENV182805667
OJVG01000780
[OJVG] human gut metagenome; human gut
1879
1954
+
Lys
TTT
[ENA]
¢þ
>WENV182805660
OJVG01000279
[OJVG] human gut metagenome; human gut
2071
1987
-
Leu
CAA
[ENA]
¢þ
>WENV182805668
OJVG01000780
[OJVG] human gut metagenome; human gut
2080
2155
+
Val
TAC
[ENA]
¢þ
>WENV182805656
OJVG01000214
[OJVG] human gut metagenome; human gut
2635
2711
+
Pro
GGG
[ENA]
¢þ
>WENV182805640
OJVG01000028
[OJVG] human gut metagenome; human gut
3045
3121
+
Val
GAC
[ENA]
¢þ
>WENV182805641
OJVG01000028
[OJVG] human gut metagenome; human gut
3126
3202
+
Val
GAC
[ENA]
¢þ
>WENV182805661
OJVG01000338
[OJVG] human gut metagenome; human gut
3165
3090
-
Asn
GTT
[ENA]
¢þ
>WENV182805642
OJVG01000028
[OJVG] human gut metagenome; human gut
3207
3283
+
Val
GAC
[ENA]
¢þ
>WENV182805644
OJVG01000077
[OJVG] human gut metagenome; human gut
3439
3345
-
SeC
TCA
[ENA]
¢þ
>WENV182805659
OJVG01000227
[OJVG] human gut metagenome; human gut
5439
5353
-
Leu
TAA
[ENA]
¢þ
>WENV182805658
OJVG01000227
[OJVG] human gut metagenome; human gut
5526
5453
-
Cys
GCA
[ENA]
¢þ
>WENV182805657
OJVG01000227
[OJVG] human gut metagenome; human gut
5642
5567
-
Gly
GCC
[ENA]
¢þ
>WENV182805649
OJVG01000171
[OJVG] human gut metagenome; human gut
6006
6082
+
Met
CAT
[ENA]
¢þ
>WENV182805650
OJVG01000171
[OJVG] human gut metagenome; human gut
6092
6176
+
Leu
TAG
[ENA]
¢þ
>WENV182805651
OJVG01000171
[OJVG] human gut metagenome; human gut
6200
6274
+
Gln
TTG
[ENA]
¢þ
>WENV182805652
OJVG01000171
[OJVG] human gut metagenome; human gut
6298
6374
+
Met
CAT
[ENA]
¢þ
>WENV182805653
OJVG01000171
[OJVG] human gut metagenome; human gut
6422
6496
+
Gln
CTG
[ENA]
¢þ
>WENV182805654
OJVG01000171
[OJVG] human gut metagenome; human gut
6573
6647
+
Gln
CTG
[ENA]
¢þ
>WENV182805655
OJVG01000193
[OJVG] human gut metagenome; human gut
7178
7105
-
Gly
CCC
[ENA]
¢þ
>WENV182805638
OJVG01000014
[OJVG] human gut metagenome; human gut
9541
9465
-
Arg
TCT
[ENA]
¢þ
>WENV182805646
OJVG01000095
[OJVG] human gut metagenome; human gut
10445
10370
-
Trp
CCA
[ENA]
¢þ
>WENV182805645
OJVG01000095
[OJVG] human gut metagenome; human gut
10575
10499
-
Asp
GTC
[ENA]
¢þ
>WENV182805643
OJVG01000030
[OJVG] human gut metagenome; human gut
15869
15944
+
Phe
GAA
[ENA]
¢þ
>WENV182805636
OJVG01000001
[OJVG] human gut metagenome; human gut
32645
32731
+
Leu
GAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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