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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJVK] human gut metagenome; human gut
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182805949
OJVK01000193
[OJVK] human gut metagenome; human gut
7
82
+
Asn
GTT
[ENA]
¢þ
>WENV182805923
OJVK01000034
[OJVK] human gut metagenome; human gut
58
133
+
Thr
GGT
[ENA]
¢þ
>WENV182805981
OJVK01001150
[OJVK] human gut metagenome; human gut
72
154
+
Tyr
GTA
[ENA]
¢þ
>WENV182805936
OJVK01000088
[OJVK] human gut metagenome; human gut
78
2
-
Arg
ACG
[ENA]
¢þ
>WENV182805974
OJVK01000800
[OJVK] human gut metagenome; human gut
120
205
+
Leu
CAG
[ENA]
¢þ
>WENV182805965
OJVK01000678
[OJVK] human gut metagenome; human gut
165
90
-
Glu
TTC
[ENA]
¢þ
>WENV182805963
OJVK01000427
[OJVK] human gut metagenome; human gut
165
239
+
Arg
TCT
[ENA]
¢þ
>WENV182805980
OJVK01001149
[OJVK] human gut metagenome; human gut
166
254
+
Leu
GAG
[ENA]
¢þ
>WENV182805964
OJVK01000675
[OJVK] human gut metagenome; human gut
166
254
+
Ser
GGA
[ENA]
¢þ
>WENV182805985
OJVK01001460
[OJVK] human gut metagenome; human gut
173
247
+
Gly
TCC
[ENA]
¢þ
>WENV182805990
OJVK01001690
[OJVK] human gut metagenome; human gut
184
108
-
fMet
CAT
[ENA]
¢þ
>WENV182805971
OJVK01000747
[OJVK] human gut metagenome; human gut
208
293
+
Ser
CGA
[ENA]
¢þ
>WENV182805935
OJVK01000088
[OJVK] human gut metagenome; human gut
215
139
-
Arg
ACG
[ENA]
¢þ
>WENV182805979
OJVK01001019
[OJVK] human gut metagenome; human gut
230
156
-
Ile2
CAT
[ENA]
¢þ
>WENV182805982
OJVK01001150
[OJVK] human gut metagenome; human gut
231
305
+
Met
CAT
[ENA]
¢þ
>WENV182805986
OJVK01001460
[OJVK] human gut metagenome; human gut
253
328
+
Thr
GGT
[ENA]
¢þ
>WENV182805989
OJVK01001586
[OJVK] human gut metagenome; human gut
287
212
-
Ala
TGC
[ENA]
¢þ
>WENV182805984
OJVK01001424
[OJVK] human gut metagenome; human gut
299
225
-
Arg
ACG
[ENA]
¢þ
>WENV182805934
OJVK01000088
[OJVK] human gut metagenome; human gut
312
220
-
Ser
GCT
[ENA]
¢þ
>WENV182805977
OJVK01000949
[OJVK] human gut metagenome; human gut
369
443
+
Leu
CAA
[ENA]
¢þ
>WENV182805987
OJVK01001559
[OJVK] human gut metagenome; human gut
388
462
+
Val
TAC
[ENA]
¢þ
>WENV182805972
OJVK01000763
[OJVK] human gut metagenome; human gut
410
336
-
Pro
TGG
[ENA]
¢þ
>WENV182805988
OJVK01001586
[OJVK] human gut metagenome; human gut
473
397
-
Ile
GAT
[ENA]
¢þ
>WENV182805924
OJVK01000036
[OJVK] human gut metagenome; human gut
482
406
-
Pro
GGG
[ENA]
¢þ
>WENV182805983
OJVK01001221
[OJVK] human gut metagenome; human gut
570
497
-
Asn
GTT
[ENA]
¢þ
>WENV182805970
OJVK01000718
[OJVK] human gut metagenome; human gut
745
672
-
Glu
TTC
[ENA]
¢þ
>WENV182805973
OJVK01000789
[OJVK] human gut metagenome; human gut
773
846
+
Lys
TTT
[ENA]
¢þ
>WENV182805976
OJVK01000863
[OJVK] human gut metagenome; human gut
796
872
+
Asp
GTC
[ENA]
¢þ
>WENV182805968
OJVK01000679
[OJVK] human gut metagenome; human gut
825
751
-
Val
CAC
[ENA]
¢þ
>WENV182805978
OJVK01000978
[OJVK] human gut metagenome; human gut
847
773
-
Thr
TGT
[ENA]
¢þ
>WENV182805975
OJVK01000823
[OJVK] human gut metagenome; human gut
882
957
+
His
GTG
[ENA]
¢þ
>WENV182805967
OJVK01000679
[OJVK] human gut metagenome; human gut
945
873
-
Val
GAC
[ENA]
¢þ
>WENV182805966
OJVK01000679
[OJVK] human gut metagenome; human gut
1064
991
-
Gly
GCC
[ENA]
¢þ
>WENV182805969
OJVK01000687
[OJVK] human gut metagenome; human gut
1335
1407
+
Gln
TTG
[ENA]
¢þ
>WENV182805940
OJVK01000109
[OJVK] human gut metagenome; human gut
1513
1424
-
Ser
CGA
[ENA]
¢þ
>WENV182805932
OJVK01000070
[OJVK] human gut metagenome; human gut
1520
1607
+
Ser
TGA
[ENA]
¢þ
>WENV182805959
OJVK01000356
[OJVK] human gut metagenome; human gut
1585
1504
-
Leu
TAA
[ENA]
¢þ
>WENV182805954
OJVK01000298
[OJVK] human gut metagenome; human gut
1630
1704
+
Ile
GAT
[ENA]
¢þ
>WENV182805958
OJVK01000350
[OJVK] human gut metagenome; human gut
1633
1560
-
Arg
CCT
[ENA]
¢þ
>WENV182805957
OJVK01000324
[OJVK] human gut metagenome; human gut
1703
1628
-
Pro
CGG
[ENA]
¢þ
>WENV182805955
OJVK01000298
[OJVK] human gut metagenome; human gut
1747
1820
+
Ala
TGC
[ENA]
¢þ
>WENV182805960
OJVK01000364
[OJVK] human gut metagenome; human gut
1944
2017
+
Thr
CGT
[ENA]
¢þ
>WENV182805962
OJVK01000419
[OJVK] human gut metagenome; human gut
1951
1864
-
Ser
GCT
[ENA]
¢þ
>WENV182805941
OJVK01000121
[OJVK] human gut metagenome; human gut
2051
1976
-
Asn
GTT
[ENA]
¢þ
>WENV182805961
OJVK01000364
[OJVK] human gut metagenome; human gut
2111
2192
+
Leu
TAG
[ENA]
¢þ
>WENV182805953
OJVK01000287
[OJVK] human gut metagenome; human gut
2217
2143
-
Gln
CTG
[ENA]
¢þ
>WENV182805952
OJVK01000287
[OJVK] human gut metagenome; human gut
2329
2256
-
Glu
CTC
[ENA]
¢þ
>WENV182805939
OJVK01000109
[OJVK] human gut metagenome; human gut
2505
2580
+
Asn
GTT
[ENA]
¢þ
>WENV182805950
OJVK01000260
[OJVK] human gut metagenome; human gut
2784
2857
+
Gly
TCC
[ENA]
¢þ
>WENV182805956
OJVK01000315
[OJVK] human gut metagenome; human gut
3007
2933
-
Asp
GTC
[ENA]
¢þ
>WENV182805944
OJVK01000153
[OJVK] human gut metagenome; human gut
3604
3691
+
Ser
GGA
[ENA]
¢þ
>WENV182805951
OJVK01000261
[OJVK] human gut metagenome; human gut
4420
4495
+
Gly
GCC
[ENA]
¢þ
>WENV182805946
OJVK01000170
[OJVK] human gut metagenome; human gut
6494
6418
-
Pro
CGG
[ENA]
¢þ
>WENV182805945
OJVK01000153
[OJVK] human gut metagenome; human gut
6577
6664
+
Ser
GGA
[ENA]
¢þ
>WENV182805938
OJVK01000102
[OJVK] human gut metagenome; human gut
8569
8475
-
SeC
TCA
[ENA]
¢þ
>WENV182805947
OJVK01000186
[OJVK] human gut metagenome; human gut
9209
9284
+
Lys
TTT
[ENA]
¢þ
>WENV182805948
OJVK01000186
[OJVK] human gut metagenome; human gut
9412
9487
+
Val
TAC
[ENA]
¢þ
>WENV182805928
OJVK01000065
[OJVK] human gut metagenome; human gut
11369
11442
+
Gly
CCC
[ENA]
¢þ
>WENV182805943
OJVK01000148
[OJVK] human gut metagenome; human gut
11781
11865
+
Leu
CAA
[ENA]
¢þ
>WENV182805942
OJVK01000132
[OJVK] human gut metagenome; human gut
14106
14030
-
fMet
CAT
[ENA]
¢þ
>WENV182805929
OJVK01000069
[OJVK] human gut metagenome; human gut
16882
16957
+
Gly
GCC
[ENA]
¢þ
>WENV182805930
OJVK01000069
[OJVK] human gut metagenome; human gut
16996
17069
+
Cys
GCA
[ENA]
¢þ
>WENV182805931
OJVK01000069
[OJVK] human gut metagenome; human gut
17083
17169
+
Leu
TAA
[ENA]
¢þ
>WENV182805908
OJVK01000005
[OJVK] human gut metagenome; human gut
18717
18793
+
Asp
GTC
[ENA]
¢þ
>WENV182805926
OJVK01000049
[OJVK] human gut metagenome; human gut
18770
18694
-
fMet
CAT
[ENA]
¢þ
>WENV182805925
OJVK01000049
[OJVK] human gut metagenome; human gut
18881
18805
-
fMet
CAT
[ENA]
¢þ
>WENV182805937
OJVK01000092
[OJVK] human gut metagenome; human gut
21645
21570
-
Trp
CCA
[ENA]
¢þ
>WENV182805919
OJVK01000025
[OJVK] human gut metagenome; human gut
23744
23820
+
Arg
CCG
[ENA]
¢þ
>WENV182805920
OJVK01000025
[OJVK] human gut metagenome; human gut
23876
23951
+
His
GTG
[ENA]
¢þ
>WENV182805921
OJVK01000025
[OJVK] human gut metagenome; human gut
23974
24060
+
Leu
CAG
[ENA]
¢þ
>WENV182805933
OJVK01000080
[OJVK] human gut metagenome; human gut
24104
24188
+
Leu
GAG
[ENA]
¢þ
>WENV182805922
OJVK01000025
[OJVK] human gut metagenome; human gut
24106
24182
+
Pro
TGG
[ENA]
¢þ
>WENV182805927
OJVK01000052
[OJVK] human gut metagenome; human gut
32754
32679
-
Gly
GCC
[ENA]
¢þ
>WENV182805912
OJVK01000019
[OJVK] human gut metagenome; human gut
38218
38291
+
Arg
CCT
[ENA]
¢þ
>WENV182805917
OJVK01000022
[OJVK] human gut metagenome; human gut
40735
40659
-
Arg
TCT
[ENA]
¢þ
>WENV182805914
OJVK01000021
[OJVK] human gut metagenome; human gut
47918
47994
+
Met
CAT
[ENA]
¢þ
>WENV182805915
OJVK01000021
[OJVK] human gut metagenome; human gut
48039
48113
+
Gln
CTG
[ENA]
¢þ
>WENV182805916
OJVK01000021
[OJVK] human gut metagenome; human gut
48208
48282
+
Gln
CTG
[ENA]
¢þ
>WENV182805918
OJVK01000023
[OJVK] human gut metagenome; human gut
51577
51663
+
Leu
CAG
[ENA]
¢þ
>WENV182805913
OJVK01000019
[OJVK] human gut metagenome; human gut
57790
57715
-
Ala
GGC
[ENA]
¢þ
>WENV182805911
OJVK01000009
[OJVK] human gut metagenome; human gut
67689
67605
-
Tyr
GTA
[ENA]
¢þ
>WENV182805910
OJVK01000009
[OJVK] human gut metagenome; human gut
67775
67700
-
Thr
TGT
[ENA]
¢þ
>WENV182805906
OJVK01000002
[OJVK] human gut metagenome; human gut
72249
72325
+
Val
GAC
[ENA]
¢þ
>WENV182805907
OJVK01000002
[OJVK] human gut metagenome; human gut
72330
72406
+
Val
GAC
[ENA]
¢þ
>WENV182805909
OJVK01000005
[OJVK] human gut metagenome; human gut
78506
78431
-
Thr
CGT
[ENA]
¢þ
>WENV182805905
OJVK01000001
[OJVK] human gut metagenome; human gut
81903
81978
+
Ile2
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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