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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJVR] human gut metagenome; human gut
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182806609
OJVR01000026
[OJVR] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182806662
OJVR01001126
[OJVR] human gut metagenome; human gut
64
139
+
Asp
GTC
[ENA]
¢þ
>WENV182806653
OJVR01000569
[OJVR] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182806586
OJVR01000007
[OJVR] human gut metagenome; human gut
87
11
-
Arg
TCT
[ENA]
¢þ
>WENV182806681
OJVR01001484
[OJVR] human gut metagenome; human gut
88
162
+
Gly
GCC
[ENA]
¢þ
>WENV182806651
OJVR01000544
[OJVR] human gut metagenome; human gut
96
186
+
Ser
GGA
[ENA]
¢þ
>WENV182806614
OJVR01000030
[OJVR] human gut metagenome; human gut
104
178
+
Gln
CTG
[ENA]
¢þ
>WENV182806680
OJVR01001259
[OJVR] human gut metagenome; human gut
117
45
-
Thr
CGT
[ENA]
¢þ
>WENV182806654
OJVR01000569
[OJVR] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182806679
OJVR01001153
[OJVR] human gut metagenome; human gut
161
85
-
Ile
GAT
[ENA]
¢þ
>WENV182806682
OJVR01001484
[OJVR] human gut metagenome; human gut
166
239
+
Gly
TCC
[ENA]
¢þ
>WENV182806663
OJVR01001126
[OJVR] human gut metagenome; human gut
185
257
+
Phe
GAA
[ENA]
¢þ
>WENV182806652
OJVR01000544
[OJVR] human gut metagenome; human gut
202
275
+
Glu
TTC
[ENA]
¢þ
>WENV182806688
OJVR01001918
[OJVR] human gut metagenome; human gut
206
132
-
Lys
CTT
[ENA]
¢þ
>WENV182806655
OJVR01000569
[OJVR] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182806678
OJVR01001153
[OJVR] human gut metagenome; human gut
241
171
-
Gly
TCC
[ENA]
¢þ
>WENV182806664
OJVR01001126
[OJVR] human gut metagenome; human gut
262
344
+
Tyr
GTA
[ENA]
¢þ
>WENV182806687
OJVR01001622
[OJVR] human gut metagenome; human gut
272
201
-
Trp
CCA
[ENA]
¢þ
>WENV182806677
OJVR01001153
[OJVR] human gut metagenome; human gut
319
243
-
Asp
GTC
[ENA]
¢þ
>WENV182806683
OJVR01001484
[OJVR] human gut metagenome; human gut
319
395
+
Arg
TCT
[ENA]
¢þ
>WENV182806656
OJVR01000569
[OJVR] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¢þ
>WENV182806665
OJVR01001126
[OJVR] human gut metagenome; human gut
348
421
+
Trp
CCA
[ENA]
¢þ
>WENV182806650
OJVR01000181
[OJVR] human gut metagenome; human gut
381
306
-
Thr
GGT
[ENA]
¢þ
>WENV182806684
OJVR01001484
[OJVR] human gut metagenome; human gut
400
475
+
His
GTG
[ENA]
¢þ
>WENV182806657
OJVR01000569
[OJVR] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¢þ
>WENV182806676
OJVR01001153
[OJVR] human gut metagenome; human gut
442
367
-
fMet
CAT
[ENA]
¢þ
>WENV182806666
OJVR01001126
[OJVR] human gut metagenome; human gut
458
531
+
His
GTG
[ENA]
¢þ
>WENV182806649
OJVR01000181
[OJVR] human gut metagenome; human gut
461
387
-
Gly
TCC
[ENA]
¢þ
>WENV182806685
OJVR01001484
[OJVR] human gut metagenome; human gut
481
555
+
Gln
TTG
[ENA]
¢þ
>WENV182806658
OJVR01000569
[OJVR] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¢þ
>WENV182806670
OJVR01001133
[OJVR] human gut metagenome; human gut
531
607
+
Ile
GAT
[ENA]
¢þ
>WENV182806667
OJVR01001126
[OJVR] human gut metagenome; human gut
544
617
+
Gln
TTG
[ENA]
¢þ
>WENV182806686
OJVR01001484
[OJVR] human gut metagenome; human gut
562
637
+
Lys
TTT
[ENA]
¢þ
>WENV182806675
OJVR01001153
[OJVR] human gut metagenome; human gut
564
475
-
Ser
TGA
[ENA]
¢þ
>WENV182806659
OJVR01000569
[OJVR] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¢þ
>WENV182806668
OJVR01001126
[OJVR] human gut metagenome; human gut
642
712
+
Cys
GCA
[ENA]
¢þ
>WENV182806671
OJVR01001133
[OJVR] human gut metagenome; human gut
650
725
+
Ala
TGC
[ENA]
¢þ
>WENV182806648
OJVR01000181
[OJVR] human gut metagenome; human gut
661
577
-
Tyr
GTA
[ENA]
¢þ
>WENV182806674
OJVR01001153
[OJVR] human gut metagenome; human gut
672
597
-
Ile2
CAT
[ENA]
¢þ
>WENV182806669
OJVR01001126
[OJVR] human gut metagenome; human gut
725
810
+
Leu
CAA
[ENA]
¢þ
>WENV182806647
OJVR01000181
[OJVR] human gut metagenome; human gut
747
672
-
Thr
TGT
[ENA]
¢þ
>WENV182806660
OJVR01000569
[OJVR] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¢þ
>WENV182806673
OJVR01001153
[OJVR] human gut metagenome; human gut
766
691
-
Met
CAT
[ENA]
¢þ
>WENV182806672
OJVR01001153
[OJVR] human gut metagenome; human gut
860
788
-
Ala
TGC
[ENA]
¢þ
>WENV182806661
OJVR01000654
[OJVR] human gut metagenome; human gut
1169
1242
+
Arg
CCG
[ENA]
¢þ
>WENV182806646
OJVR01000135
[OJVR] human gut metagenome; human gut
1931
1856
-
Thr
CGT
[ENA]
¢þ
>WENV182806572
OJVR01000002
[OJVR] human gut metagenome; human gut
2745
2820
+
Ala
GGC
[ENA]
¢þ
>WENV182806573
OJVR01000002
[OJVR] human gut metagenome; human gut
2860
2935
+
Ala
GGC
[ENA]
¢þ
>WENV182806645
OJVR01000122
[OJVR] human gut metagenome; human gut
3284
3208
-
Asp
GTC
[ENA]
¢þ
>WENV182806632
OJVR01000043
[OJVR] human gut metagenome; human gut
7562
7476
-
Leu
TAA
[ENA]
¢þ
>WENV182806631
OJVR01000043
[OJVR] human gut metagenome; human gut
7648
7575
-
Cys
GCA
[ENA]
¢þ
>WENV182806630
OJVR01000043
[OJVR] human gut metagenome; human gut
7764
7689
-
Gly
GCC
[ENA]
¢þ
>WENV182806639
OJVR01000063
[OJVR] human gut metagenome; human gut
9426
9502
+
Asp
GTC
[ENA]
¢þ
>WENV182806642
OJVR01000111
[OJVR] human gut metagenome; human gut
11106
11181
+
Ile2
CAT
[ENA]
¢þ
>WENV182806643
OJVR01000111
[OJVR] human gut metagenome; human gut
11189
11265
+
Arg
TCG
[ENA]
¢þ
>WENV182806644
OJVR01000111
[OJVR] human gut metagenome; human gut
11279
11355
+
Arg
TCT
[ENA]
¢þ
>WENV182806605
OJVR01000020
[OJVR] human gut metagenome; human gut
17910
17983
+
Gly
CCC
[ENA]
¢þ
>WENV182806577
OJVR01000003
[OJVR] human gut metagenome; human gut
20450
20376
-
Arg
CCT
[ENA]
¢þ
>WENV182806640
OJVR01000074
[OJVR] human gut metagenome; human gut
27818
27745
-
Thr
TGT
[ENA]
¢þ
>WENV182806629
OJVR01000043
[OJVR] human gut metagenome; human gut
28959
28870
-
Ser
CGA
[ENA]
¢þ
>WENV182806625
OJVR01000043
[OJVR] human gut metagenome; human gut
29951
30026
+
Asn
GTT
[ENA]
¢þ
>WENV182806606
OJVR01000021
[OJVR] human gut metagenome; human gut
31258
31334
+
Pro
CGG
[ENA]
¢þ
>WENV182806636
OJVR01000050
[OJVR] human gut metagenome; human gut
33403
33328
-
Phe
GAA
[ENA]
¢þ
>WENV182806610
OJVR01000026
[OJVR] human gut metagenome; human gut
34608
34684
+
Arg
CCG
[ENA]
¢þ
>WENV182806611
OJVR01000026
[OJVR] human gut metagenome; human gut
34743
34818
+
His
GTG
[ENA]
¢þ
>WENV182806612
OJVR01000026
[OJVR] human gut metagenome; human gut
34839
34925
+
Leu
CAG
[ENA]
¢þ
>WENV182806613
OJVR01000026
[OJVR] human gut metagenome; human gut
34968
35044
+
Pro
TGG
[ENA]
¢þ
>WENV182806626
OJVR01000043
[OJVR] human gut metagenome; human gut
35192
35267
+
Asn
GTT
[ENA]
¢þ
>WENV182806618
OJVR01000034
[OJVR] human gut metagenome; human gut
35915
35842
-
Gly
CCC
[ENA]
¢þ
>WENV182806635
OJVR01000046
[OJVR] human gut metagenome; human gut
36314
36239
-
Phe
GAA
[ENA]
¢þ
>WENV182806641
OJVR01000078
[OJVR] human gut metagenome; human gut
36692
36779
+
Ser
GGA
[ENA]
¢þ
>WENV182806637
OJVR01000052
[OJVR] human gut metagenome; human gut
37958
37864
-
SeC
TCA
[ENA]
¢þ
>WENV182806620
OJVR01000039
[OJVR] human gut metagenome; human gut
41589
41513
-
Pro
CGG
[ENA]
¢þ
>WENV182806587
OJVR01000010
[OJVR] human gut metagenome; human gut
43269
43355
+
Leu
GAG
[ENA]
¢þ
>WENV182806638
OJVR01000058
[OJVR] human gut metagenome; human gut
43700
43613
-
Ser
TGA
[ENA]
¢þ
>WENV182806628
OJVR01000043
[OJVR] human gut metagenome; human gut
44189
44114
-
Asn
GTT
[ENA]
¢þ
>WENV182806616
OJVR01000033
[OJVR] human gut metagenome; human gut
45567
45653
+
Leu
GAG
[ENA]
¢þ
>WENV182806627
OJVR01000043
[OJVR] human gut metagenome; human gut
45947
46022
+
Asn
GTT
[ENA]
¢þ
>WENV182806588
OJVR01000010
[OJVR] human gut metagenome; human gut
47285
47361
+
fMet
CAT
[ENA]
¢þ
>WENV182806624
OJVR01000042
[OJVR] human gut metagenome; human gut
47897
47821
-
Pro
TGG
[ENA]
¢þ
>WENV182806623
OJVR01000042
[OJVR] human gut metagenome; human gut
48026
47940
-
Leu
CAG
[ENA]
¢þ
>WENV182806622
OJVR01000042
[OJVR] human gut metagenome; human gut
48125
48050
-
His
GTG
[ENA]
¢þ
>WENV182806621
OJVR01000042
[OJVR] human gut metagenome; human gut
48260
48184
-
Arg
CCG
[ENA]
¢þ
>WENV182806634
OJVR01000045
[OJVR] human gut metagenome; human gut
48843
48767
-
Val
GAC
[ENA]
¢þ
>WENV182806633
OJVR01000045
[OJVR] human gut metagenome; human gut
48924
48848
-
Val
GAC
[ENA]
¢þ
>WENV182806617
OJVR01000033
[OJVR] human gut metagenome; human gut
49434
49510
+
fMet
CAT
[ENA]
¢þ
>WENV182806599
OJVR01000017
[OJVR] human gut metagenome; human gut
52971
52882
-
Ser
CGA
[ENA]
¢þ
>WENV182806593
OJVR01000016
[OJVR] human gut metagenome; human gut
53913
54000
+
Ser
GGA
[ENA]
¢þ
>WENV182806595
OJVR01000017
[OJVR] human gut metagenome; human gut
53963
54038
+
Asn
GTT
[ENA]
¢þ
>WENV182806575
OJVR01000002
[OJVR] human gut metagenome; human gut
55285
55211
-
Arg
CCT
[ENA]
¢þ
>WENV182806603
OJVR01000018
[OJVR] human gut metagenome; human gut
63621
63545
-
Arg
ACG
[ENA]
¢þ
>WENV182806602
OJVR01000018
[OJVR] human gut metagenome; human gut
63926
63850
-
Arg
ACG
[ENA]
¢þ
>WENV182806601
OJVR01000018
[OJVR] human gut metagenome; human gut
64153
64077
-
Arg
ACG
[ENA]
¢þ
>WENV182806600
OJVR01000018
[OJVR] human gut metagenome; human gut
64249
64157
-
Ser
GCT
[ENA]
¢þ
>WENV182806619
OJVR01000037
[OJVR] human gut metagenome; human gut
69605
69530
-
Phe
GAA
[ENA]
¢þ
>WENV182806615
OJVR01000032
[OJVR] human gut metagenome; human gut
77298
77223
-
Thr
CGT
[ENA]
¢þ
>WENV182806598
OJVR01000017
[OJVR] human gut metagenome; human gut
93928
93853
-
Asn
GTT
[ENA]
¢þ
>WENV182806608
OJVR01000025
[OJVR] human gut metagenome; human gut
94146
94052
-
SeC
TCA
[ENA]
¢þ
>WENV182806597
OJVR01000017
[OJVR] human gut metagenome; human gut
96337
96262
-
Asn
GTT
[ENA]
¢þ
>WENV182806596
OJVR01000017
[OJVR] human gut metagenome; human gut
98086
98161
+
Asn
GTT
[ENA]
¢þ
>WENV182806594
OJVR01000016
[OJVR] human gut metagenome; human gut
106026
106113
+
Ser
TGA
[ENA]
¢þ
>WENV182806578
OJVR01000004
[OJVR] human gut metagenome; human gut
114572
114656
+
Leu
CAA
[ENA]
¢þ
>WENV182806585
OJVR01000005
[OJVR] human gut metagenome; human gut
115595
115519
-
Arg
TCT
[ENA]
¢þ
>WENV182806604
OJVR01000019
[OJVR] human gut metagenome; human gut
121020
121096
+
fMet
CAT
[ENA]
¢þ
>WENV182806590
OJVR01000013
[OJVR] human gut metagenome; human gut
135870
135945
+
Ile2
CAT
[ENA]
¢þ
>WENV182806591
OJVR01000014
[OJVR] human gut metagenome; human gut
142743
142656
-
Ser
GGA
[ENA]
¢þ
>WENV182806576
OJVR01000003
[OJVR] human gut metagenome; human gut
144421
144345
-
Pro
GGG
[ENA]
¢þ
>WENV182806607
OJVR01000022
[OJVR] human gut metagenome; human gut
148554
148478
-
Val
GAC
[ENA]
¢þ
>WENV182806589
OJVR01000010
[OJVR] human gut metagenome; human gut
164291
164216
-
Ile2
CAT
[ENA]
¢þ
>WENV182806592
OJVR01000015
[OJVR] human gut metagenome; human gut
167914
167990
+
Arg
TCT
[ENA]
¢þ
>WENV182806581
OJVR01000004
[OJVR] human gut metagenome; human gut
194382
194296
-
Leu
CAG
[ENA]
¢þ
>WENV182806580
OJVR01000004
[OJVR] human gut metagenome; human gut
194503
194417
-
Leu
CAG
[ENA]
¢þ
>WENV182806579
OJVR01000004
[OJVR] human gut metagenome; human gut
194618
194532
-
Leu
CAG
[ENA]
¢þ
>WENV182806574
OJVR01000002
[OJVR] human gut metagenome; human gut
225252
225176
-
Pro
GGG
[ENA]
¢þ
>WENV182806584
OJVR01000005
[OJVR] human gut metagenome; human gut
227351
227276
-
Lys
TTT
[ENA]
¢þ
>WENV182806583
OJVR01000005
[OJVR] human gut metagenome; human gut
227431
227356
-
Val
TAC
[ENA]
¢þ
>WENV182806582
OJVR01000005
[OJVR] human gut metagenome; human gut
227550
227475
-
Val
TAC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK