This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJWC] human gut metagenome; human gut
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182808207
OJWC01000910
[OJWC] human gut metagenome; human gut
2
76
+
Arg
TCT
[ENA]
¢þ
>WENV182808208
OJWC01001042
[OJWC] human gut metagenome; human gut
68
149
+
Tyr
GTA
[ENA]
¢þ
>WENV182808159
OJWC01000039
[OJWC] human gut metagenome; human gut
78
166
+
Leu
TAA
[ENA]
¢þ
>WENV182808214
OJWC01001716
[OJWC] human gut metagenome; human gut
87
3
-
Leu
TAG
[ENA]
¢þ
>WENV182808165
OJWC01000050
[OJWC] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182808206
OJWC01000423
[OJWC] human gut metagenome; human gut
142
69
-
Gly
TCC
[ENA]
¢þ
>WENV182808153
OJWC01000028
[OJWC] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182808209
OJWC01001042
[OJWC] human gut metagenome; human gut
179
251
+
Thr
TGT
[ENA]
¢þ
>WENV182808181
OJWC01000072
[OJWC] human gut metagenome; human gut
212
137
-
Ala
TGC
[ENA]
¢þ
>WENV182808205
OJWC01000423
[OJWC] human gut metagenome; human gut
235
160
-
His
GTG
[ENA]
¢þ
>WENV182808210
OJWC01001042
[OJWC] human gut metagenome; human gut
276
351
+
fMet
CAT
[ENA]
¢þ
>WENV182808180
OJWC01000072
[OJWC] human gut metagenome; human gut
300
226
-
Pro
TGG
[ENA]
¢þ
>WENV182808204
OJWC01000423
[OJWC] human gut metagenome; human gut
322
248
-
Phe
GAA
[ENA]
¢þ
>WENV182808192
OJWC01000097
[OJWC] human gut metagenome; human gut
336
261
-
Thr
GGT
[ENA]
¢þ
>WENV182808173
OJWC01000066
[OJWC] human gut metagenome; human gut
359
272
-
Ser
GCT
[ENA]
¢þ
>WENV182808211
OJWC01001042
[OJWC] human gut metagenome; human gut
370
444
+
Phe
GAA
[ENA]
¢þ
>WENV182808179
OJWC01000072
[OJWC] human gut metagenome; human gut
403
327
-
Arg
ACG
[ENA]
¢þ
>WENV182808203
OJWC01000423
[OJWC] human gut metagenome; human gut
407
332
-
Asp
GTC
[ENA]
¢þ
>WENV182808191
OJWC01000097
[OJWC] human gut metagenome; human gut
417
343
-
Gly
TCC
[ENA]
¢þ
>WENV182808215
OJWC01002364
[OJWC] human gut metagenome; human gut
468
392
-
Arg
CCT
[ENA]
¢þ
>WENV182808212
OJWC01001042
[OJWC] human gut metagenome; human gut
479
551
+
Lys
TTT
[ENA]
¢þ
>WENV182808213
OJWC01001062
[OJWC] human gut metagenome; human gut
486
576
+
Ser
GCT
[ENA]
¢þ
>WENV182808202
OJWC01000423
[OJWC] human gut metagenome; human gut
495
422
-
fMet
CAT
[ENA]
¢þ
>WENV182808178
OJWC01000072
[OJWC] human gut metagenome; human gut
504
416
-
Leu
TAA
[ENA]
¢þ
>WENV182808124
OJWC01000012
[OJWC] human gut metagenome; human gut
575
491
-
Leu
CAA
[ENA]
¢þ
>WENV182808177
OJWC01000072
[OJWC] human gut metagenome; human gut
590
516
-
Gly
GCC
[ENA]
¢þ
>WENV182808190
OJWC01000097
[OJWC] human gut metagenome; human gut
618
534
-
Tyr
GTA
[ENA]
¢þ
>WENV182808176
OJWC01000072
[OJWC] human gut metagenome; human gut
682
608
-
Lys
TTT
[ENA]
¢þ
>WENV182808189
OJWC01000097
[OJWC] human gut metagenome; human gut
702
627
-
Thr
TGT
[ENA]
¢þ
>WENV182808175
OJWC01000072
[OJWC] human gut metagenome; human gut
763
688
-
Thr
TGT
[ENA]
¢þ
>WENV182808174
OJWC01000072
[OJWC] human gut metagenome; human gut
845
770
-
Val
TAC
[ENA]
¢þ
>WENV182808196
OJWC01000188
[OJWC] human gut metagenome; human gut
1005
1076
+
Arg
CCG
[ENA]
¢þ
>WENV182808199
OJWC01000215
[OJWC] human gut metagenome; human gut
2185
2093
-
Ser
TGA
[ENA]
¢þ
>WENV182808152
OJWC01000027
[OJWC] human gut metagenome; human gut
2294
2207
-
Ser
GGA
[ENA]
¢þ
>WENV182808184
OJWC01000078
[OJWC] human gut metagenome; human gut
2305
2381
+
Asp
GTC
[ENA]
¢þ
>WENV182808197
OJWC01000210
[OJWC] human gut metagenome; human gut
2349
2423
+
Asn
GTT
[ENA]
¢þ
>WENV182808198
OJWC01000210
[OJWC] human gut metagenome; human gut
2426
2516
+
Ser
GCT
[ENA]
¢þ
>WENV182808168
OJWC01000053
[OJWC] human gut metagenome; human gut
2750
2825
+
Ala
GGC
[ENA]
¢þ
>WENV182808169
OJWC01000053
[OJWC] human gut metagenome; human gut
2867
2942
+
Ala
GGC
[ENA]
¢þ
>WENV182808200
OJWC01000348
[OJWC] human gut metagenome; human gut
3456
3526
+
Gly
TCC
[ENA]
¢þ
>WENV182808151
OJWC01000027
[OJWC] human gut metagenome; human gut
5218
5131
-
Ser
GGA
[ENA]
¢þ
>WENV182808171
OJWC01000058
[OJWC] human gut metagenome; human gut
5232
5160
-
Thr
CGT
[ENA]
¢þ
>WENV182808201
OJWC01000402
[OJWC] human gut metagenome; human gut
5577
5505
-
Trp
CCA
[ENA]
¢þ
>WENV182808188
OJWC01000097
[OJWC] human gut metagenome; human gut
8415
8339
-
Pro
TGG
[ENA]
¢þ
>WENV182808195
OJWC01000126
[OJWC] human gut metagenome; human gut
9056
8983
-
Asn
GTT
[ENA]
¢þ
>WENV182808194
OJWC01000126
[OJWC] human gut metagenome; human gut
9166
9094
-
Ala
TGC
[ENA]
¢þ
>WENV182808185
OJWC01000078
[OJWC] human gut metagenome; human gut
11739
11815
+
Asp
GTC
[ENA]
¢þ
>WENV182808162
OJWC01000044
[OJWC] human gut metagenome; human gut
11854
11928
+
Arg
ACG
[ENA]
¢þ
>WENV182808166
OJWC01000051
[OJWC] human gut metagenome; human gut
17191
17118
-
Arg
CCG
[ENA]
¢þ
>WENV182808167
OJWC01000052
[OJWC] human gut metagenome; human gut
17676
17758
+
Leu
CAA
[ENA]
¢þ
>WENV182808193
OJWC01000119
[OJWC] human gut metagenome; human gut
19984
19912
-
Arg
CCG
[ENA]
¢þ
>WENV182808125
OJWC01000016
[OJWC] human gut metagenome; human gut
20490
20565
+
Pro
TGG
[ENA]
¢þ
>WENV182808126
OJWC01000016
[OJWC] human gut metagenome; human gut
20569
20639
+
Gly
TCC
[ENA]
¢þ
>WENV182808127
OJWC01000016
[OJWC] human gut metagenome; human gut
20690
20765
+
Arg
TCT
[ENA]
¢þ
>WENV182808187
OJWC01000096
[OJWC] human gut metagenome; human gut
20768
20860
+
Ser
TGA
[ENA]
¢þ
>WENV182808128
OJWC01000016
[OJWC] human gut metagenome; human gut
20770
20844
+
His
GTG
[ENA]
¢þ
>WENV182808129
OJWC01000016
[OJWC] human gut metagenome; human gut
20897
20968
+
Gln
TTG
[ENA]
¢þ
>WENV182808150
OJWC01000020
[OJWC] human gut metagenome; human gut
20977
20890
-
Ser
TGA
[ENA]
¢þ
>WENV182808130
OJWC01000016
[OJWC] human gut metagenome; human gut
21003
21075
+
Lys
TTT
[ENA]
¢þ
>WENV182808131
OJWC01000016
[OJWC] human gut metagenome; human gut
21124
21206
+
Leu
TAG
[ENA]
¢þ
>WENV182808170
OJWC01000053
[OJWC] human gut metagenome; human gut
21161
21089
-
Arg
CCT
[ENA]
¢þ
>WENV182808142
OJWC01000019
[OJWC] human gut metagenome; human gut
24631
24705
+
Val
TAC
[ENA]
¢þ
>WENV182808143
OJWC01000019
[OJWC] human gut metagenome; human gut
24718
24792
+
Met
CAT
[ENA]
¢þ
>WENV182808118
OJWC01000011
[OJWC] human gut metagenome; human gut
25504
25588
+
Leu
CAG
[ENA]
¢þ
>WENV182808149
OJWC01000020
[OJWC] human gut metagenome; human gut
26518
26431
-
Ser
TGA
[ENA]
¢þ
>WENV182808144
OJWC01000019
[OJWC] human gut metagenome; human gut
27479
27553
+
Val
TAC
[ENA]
¢þ
>WENV182808145
OJWC01000019
[OJWC] human gut metagenome; human gut
27566
27640
+
Met
CAT
[ENA]
¢þ
>WENV182808172
OJWC01000066
[OJWC] human gut metagenome; human gut
30411
30338
-
Arg
CCT
[ENA]
¢þ
>WENV182808186
OJWC01000078
[OJWC] human gut metagenome; human gut
33096
33171
+
Thr
CGT
[ENA]
¢þ
>WENV182808161
OJWC01000043
[OJWC] human gut metagenome; human gut
33797
33724
-
Gly
GCC
[ENA]
¢þ
>WENV182808146
OJWC01000019
[OJWC] human gut metagenome; human gut
34294
34368
+
Thr
GGT
[ENA]
¢þ
>WENV182808158
OJWC01000036
[OJWC] human gut metagenome; human gut
34861
34785
-
Pro
TGG
[ENA]
¢þ
>WENV182808157
OJWC01000036
[OJWC] human gut metagenome; human gut
34992
34906
-
Leu
CAG
[ENA]
¢þ
>WENV182808156
OJWC01000036
[OJWC] human gut metagenome; human gut
35089
35014
-
His
GTG
[ENA]
¢þ
>WENV182808155
OJWC01000036
[OJWC] human gut metagenome; human gut
35233
35157
-
Arg
CCG
[ENA]
¢þ
>WENV182808183
OJWC01000073
[OJWC] human gut metagenome; human gut
38816
38742
-
Pro
CGG
[ENA]
¢þ
>WENV182808182
OJWC01000073
[OJWC] human gut metagenome; human gut
38917
38847
-
Gln
CTG
[ENA]
¢þ
>WENV182808164
OJWC01000049
[OJWC] human gut metagenome; human gut
39385
39479
+
SeC
TCA
[ENA]
¢þ
>WENV182808109
OJWC01000005
[OJWC] human gut metagenome; human gut
42971
42896
-
Phe
GAA
[ENA]
¢þ
>WENV182808103
OJWC01000002
[OJWC] human gut metagenome; human gut
44631
44547
-
Tyr
GTA
[ENA]
¢þ
>WENV182808119
OJWC01000011
[OJWC] human gut metagenome; human gut
45395
45323
-
Glu
CTC
[ENA]
¢þ
>WENV182808163
OJWC01000047
[OJWC] human gut metagenome; human gut
49499
49413
-
Leu
CAG
[ENA]
¢þ
>WENV182808154
OJWC01000033
[OJWC] human gut metagenome; human gut
53835
53760
-
Ile2
CAT
[ENA]
¢þ
>WENV182808160
OJWC01000042
[OJWC] human gut metagenome; human gut
58981
59057
+
Pro
GGG
[ENA]
¢þ
>WENV182808110
OJWC01000006
[OJWC] human gut metagenome; human gut
63195
63271
+
Met
CAT
[ENA]
¢þ
>WENV182808111
OJWC01000006
[OJWC] human gut metagenome; human gut
63280
63364
+
Leu
TAG
[ENA]
¢þ
>WENV182808112
OJWC01000006
[OJWC] human gut metagenome; human gut
63388
63462
+
Gln
TTG
[ENA]
¢þ
>WENV182808113
OJWC01000006
[OJWC] human gut metagenome; human gut
63495
63569
+
Gln
TTG
[ENA]
¢þ
>WENV182808114
OJWC01000006
[OJWC] human gut metagenome; human gut
63587
63663
+
Met
CAT
[ENA]
¢þ
>WENV182808115
OJWC01000006
[OJWC] human gut metagenome; human gut
63705
63779
+
Gln
CTG
[ENA]
¢þ
>WENV182808116
OJWC01000006
[OJWC] human gut metagenome; human gut
63814
63888
+
Gln
CTG
[ENA]
¢þ
>WENV182808132
OJWC01000016
[OJWC] human gut metagenome; human gut
67812
67885
+
Lys
CTT
[ENA]
¢þ
>WENV182808147
OJWC01000019
[OJWC] human gut metagenome; human gut
71096
71180
+
Leu
AAG
[ENA]
¢þ
>WENV182808148
OJWC01000019
[OJWC] human gut metagenome; human gut
72175
72091
-
Leu
AAG
[ENA]
¢þ
>WENV182808094
OJWC01000001
[OJWC] human gut metagenome; human gut
75286
75360
+
Asn
GTT
[ENA]
¢þ
>WENV182808095
OJWC01000001
[OJWC] human gut metagenome; human gut
75366
75440
+
Thr
TGT
[ENA]
¢þ
>WENV182808133
OJWC01000016
[OJWC] human gut metagenome; human gut
79242
79313
+
Glu
TTC
[ENA]
¢þ
>WENV182808134
OJWC01000016
[OJWC] human gut metagenome; human gut
79341
79413
+
Cys
GCA
[ENA]
¢þ
>WENV182808135
OJWC01000016
[OJWC] human gut metagenome; human gut
104804
104875
+
Gln
CTG
[ENA]
¢þ
>WENV182808102
OJWC01000001
[OJWC] human gut metagenome; human gut
104845
104770
-
Asn
GTT
[ENA]
¢þ
>WENV182808096
OJWC01000001
[OJWC] human gut metagenome; human gut
106594
106669
+
Asn
GTT
[ENA]
¢þ
>WENV182808138
OJWC01000017
[OJWC] human gut metagenome; human gut
106678
106764
+
Leu
GAG
[ENA]
¢þ
>WENV182808139
OJWC01000017
[OJWC] human gut metagenome; human gut
108551
108627
+
fMet
CAT
[ENA]
¢þ
>WENV182808104
OJWC01000003
[OJWC] human gut metagenome; human gut
116930
117006
+
Val
GAC
[ENA]
¢þ
>WENV182808105
OJWC01000003
[OJWC] human gut metagenome; human gut
117011
117087
+
Val
GAC
[ENA]
¢þ
>WENV182808101
OJWC01000001
[OJWC] human gut metagenome; human gut
120386
120311
-
Asn
GTT
[ENA]
¢þ
>WENV182808141
OJWC01000018
[OJWC] human gut metagenome; human gut
120635
120559
-
Arg
ACG
[ENA]
¢þ
>WENV182808140
OJWC01000018
[OJWC] human gut metagenome; human gut
120873
120797
-
Arg
ACG
[ENA]
¢þ
>WENV182808100
OJWC01000001
[OJWC] human gut metagenome; human gut
122846
122771
-
Asn
GTT
[ENA]
¢þ
>WENV182808123
OJWC01000012
[OJWC] human gut metagenome; human gut
127921
127846
-
Gly
GCC
[ENA]
¢þ
>WENV182808122
OJWC01000012
[OJWC] human gut metagenome; human gut
128042
127967
-
Gly
GCC
[ENA]
¢þ
>WENV182808121
OJWC01000012
[OJWC] human gut metagenome; human gut
128163
128088
-
Gly
GCC
[ENA]
¢þ
>WENV182808136
OJWC01000016
[OJWC] human gut metagenome; human gut
129545
129631
+
Ser
TGA
[ENA]
¢þ
>WENV182808137
OJWC01000016
[OJWC] human gut metagenome; human gut
129768
129859
+
Ser
GGA
[ENA]
¢þ
>WENV182808107
OJWC01000005
[OJWC] human gut metagenome; human gut
139715
139788
+
Gly
CCC
[ENA]
¢þ
>WENV182808120
OJWC01000012
[OJWC] human gut metagenome; human gut
161346
161421
+
Phe
GAA
[ENA]
¢þ
>WENV182808117
OJWC01000009
[OJWC] human gut metagenome; human gut
187777
187703
-
Pro
GGG
[ENA]
¢þ
>WENV182808097
OJWC01000001
[OJWC] human gut metagenome; human gut
188022
188097
+
Gly
GCC
[ENA]
¢þ
>WENV182808098
OJWC01000001
[OJWC] human gut metagenome; human gut
188149
188222
+
Cys
GCA
[ENA]
¢þ
>WENV182808099
OJWC01000001
[OJWC] human gut metagenome; human gut
188234
188320
+
Leu
TAA
[ENA]
¢þ
>WENV182808108
OJWC01000005
[OJWC] human gut metagenome; human gut
226983
226907
-
fMet
CAT
[ENA]
¢þ
>WENV182808106
OJWC01000004
[OJWC] human gut metagenome; human gut
248299
248375
+
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK