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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OJWQ] human gut metagenome; human gut
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182809472
OJWQ01002961
[OJWQ] human gut metagenome; human gut
61
134
+
Cys
GCA
[ENA]
¢þ
>WENV182809443
OJWQ01000302
[OJWQ] human gut metagenome; human gut
72
147
+
Thr
GGT
[ENA]
¢þ
>WENV182809471
OJWQ01002919
[OJWQ] human gut metagenome; human gut
77
2
-
Phe
GAA
[ENA]
¢þ
>WENV182809466
OJWQ01002770
[OJWQ] human gut metagenome; human gut
87
176
+
Ser
TGA
[ENA]
¢þ
>WENV182809463
OJWQ01002616
[OJWQ] human gut metagenome; human gut
111
36
-
Asn
GTT
[ENA]
¢þ
>WENV182809452
OJWQ01001376
[OJWQ] human gut metagenome; human gut
117
193
+
Arg
ACG
[ENA]
¢þ
>WENV182809454
OJWQ01001859
[OJWQ] human gut metagenome; human gut
135
60
-
Val
TAC
[ENA]
¢þ
>WENV182809462
OJWQ01002221
[OJWQ] human gut metagenome; human gut
145
71
-
Gln
TTG
[ENA]
¢þ
>WENV182809473
OJWQ01002961
[OJWQ] human gut metagenome; human gut
147
233
+
Leu
TAA
[ENA]
¢þ
>WENV182809470
OJWQ01002862
[OJWQ] human gut metagenome; human gut
151
240
+
Ser
CGA
[ENA]
¢þ
>WENV182809445
OJWQ01000502
[OJWQ] human gut metagenome; human gut
153
228
+
Asn
GTT
[ENA]
¢þ
>WENV182809449
OJWQ01001136
[OJWQ] human gut metagenome; human gut
156
231
+
Ile2
CAT
[ENA]
¢þ
>WENV182809467
OJWQ01002770
[OJWQ] human gut metagenome; human gut
209
284
+
fMet
CAT
[ENA]
¢þ
>WENV182809461
OJWQ01002221
[OJWQ] human gut metagenome; human gut
226
151
-
His
GTG
[ENA]
¢þ
>WENV182809455
OJWQ01002131
[OJWQ] human gut metagenome; human gut
300
386
+
Leu
CAG
[ENA]
¢þ
>WENV182809460
OJWQ01002221
[OJWQ] human gut metagenome; human gut
309
234
-
Lys
CTT
[ENA]
¢þ
>WENV182809464
OJWQ01002704
[OJWQ] human gut metagenome; human gut
314
389
+
Thr
TGT
[ENA]
¢þ
>WENV182809453
OJWQ01001746
[OJWQ] human gut metagenome; human gut
324
237
-
Ser
GGA
[ENA]
¢þ
>WENV182809468
OJWQ01002770
[OJWQ] human gut metagenome; human gut
332
408
+
Asp
GTC
[ENA]
¢þ
>WENV182809459
OJWQ01002221
[OJWQ] human gut metagenome; human gut
391
315
-
Arg
TCT
[ENA]
¢þ
>WENV182809465
OJWQ01002704
[OJWQ] human gut metagenome; human gut
398
482
+
Tyr
GTA
[ENA]
¢þ
>WENV182809469
OJWQ01002770
[OJWQ] human gut metagenome; human gut
410
480
+
Gly
TCC
[ENA]
¢þ
>WENV182809442
OJWQ01000244
[OJWQ] human gut metagenome; human gut
475
400
-
Thr
CGT
[ENA]
¢þ
>WENV182809458
OJWQ01002221
[OJWQ] human gut metagenome; human gut
475
402
-
Gly
TCC
[ENA]
¢þ
>WENV182809457
OJWQ01002221
[OJWQ] human gut metagenome; human gut
556
482
-
Gly
GCC
[ENA]
¢þ
>WENV182809456
OJWQ01002221
[OJWQ] human gut metagenome; human gut
643
560
-
Leu
TAG
[ENA]
¢þ
>WENV182809450
OJWQ01001243
[OJWQ] human gut metagenome; human gut
698
622
-
Val
GAC
[ENA]
¢þ
>WENV182809440
OJWQ01000097
[OJWQ] human gut metagenome; human gut
770
695
-
Phe
GAA
[ENA]
¢þ
>WENV182809446
OJWQ01000503
[OJWQ] human gut metagenome; human gut
779
855
+
Asp
GTC
[ENA]
¢þ
>WENV182809451
OJWQ01001310
[OJWQ] human gut metagenome; human gut
908
983
+
Lys
TTT
[ENA]
¢þ
>WENV182809448
OJWQ01000944
[OJWQ] human gut metagenome; human gut
1269
1345
+
Arg
CCG
[ENA]
¢þ
>WENV182809444
OJWQ01000324
[OJWQ] human gut metagenome; human gut
1463
1388
-
Glu
TTC
[ENA]
¢þ
>WENV182809447
OJWQ01000542
[OJWQ] human gut metagenome; human gut
1513
1589
+
Pro
CGG
[ENA]
¢þ
>WENV182809441
OJWQ01000205
[OJWQ] human gut metagenome; human gut
2206
2132
-
Ala
TGC
[ENA]
¢þ
>WENV182809437
OJWQ01000042
[OJWQ] human gut metagenome; human gut
2401
2325
-
fMet
CAT
[ENA]
¢þ
>WENV182809439
OJWQ01000088
[OJWQ] human gut metagenome; human gut
3425
3501
+
Arg
TCT
[ENA]
¢þ
>WENV182809438
OJWQ01000084
[OJWQ] human gut metagenome; human gut
3507
3599
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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