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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OJXA] human gut metagenome; human gut
HIT:
144 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182810430
OJXA01000809
[OJXA] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182810448
OJXA01002875
[OJXA] human gut metagenome; human gut
64
153
+
Ser
TGA
[ENA]
¢þ
>WENV182810434
OJXA01000840
[OJXA] human gut metagenome; human gut
79
4
-
Val
TAC
[ENA]
¢þ
>WENV182810447
OJXA01002828
[OJXA] human gut metagenome; human gut
83
11
-
Gln
CTG
[ENA]
¢þ
>WENV182810392
OJXA01000303
[OJXA] human gut metagenome; human gut
87
11
-
Arg
TCT
[ENA]
¢þ
>WENV182810435
OJXA01000947
[OJXA] human gut metagenome; human gut
90
164
+
Gln
CTG
[ENA]
¢þ
>WENV182810368
OJXA01000067
[OJXA] human gut metagenome; human gut
128
53
-
Lys
TTT
[ENA]
¢þ
>WENV182810410
OJXA01000502
[OJXA] human gut metagenome; human gut
132
204
+
Ala
TGC
[ENA]
¢þ
>WENV182810394
OJXA01000333
[OJXA] human gut metagenome; human gut
150
74
-
Pro
CGG
[ENA]
¢þ
>WENV182810449
OJXA01002875
[OJXA] human gut metagenome; human gut
186
261
+
fMet
CAT
[ENA]
¢þ
>WENV182810458
OJXA01003374
[OJXA] human gut metagenome; human gut
201
119
-
Tyr
GTA
[ENA]
¢þ
>WENV182810406
OJXA01000408
[OJXA] human gut metagenome; human gut
205
130
-
Lys
CTT
[ENA]
¢þ
>WENV182810367
OJXA01000067
[OJXA] human gut metagenome; human gut
207
133
-
Gln
TTG
[ENA]
¢þ
>WENV182810436
OJXA01000951
[OJXA] human gut metagenome; human gut
236
309
+
Arg
CCG
[ENA]
¢þ
>WENV182810437
OJXA01001008
[OJXA] human gut metagenome; human gut
251
179
-
Thr
CGT
[ENA]
¢þ
>WENV182810445
OJXA01002470
[OJXA] human gut metagenome; human gut
262
189
-
Ala
TGC
[ENA]
¢þ
>WENV182810443
OJXA01002461
[OJXA] human gut metagenome; human gut
297
221
-
Arg
ACG
[ENA]
¢þ
>WENV182810366
OJXA01000067
[OJXA] human gut metagenome; human gut
307
232
-
His
GTG
[ENA]
¢þ
>WENV182810450
OJXA01002875
[OJXA] human gut metagenome; human gut
308
383
+
Asp
GTC
[ENA]
¢þ
>WENV182810456
OJXA01003123
[OJXA] human gut metagenome; human gut
333
259
-
Pro
CGG
[ENA]
¢þ
>WENV182810457
OJXA01003250
[OJXA] human gut metagenome; human gut
344
256
-
Ser
GCT
[ENA]
¢þ
>WENV182810451
OJXA01002875
[OJXA] human gut metagenome; human gut
387
464
+
Phe
GAA
[ENA]
¢þ
>WENV182810455
OJXA01003003
[OJXA] human gut metagenome; human gut
448
523
+
Arg
CCG
[ENA]
¢þ
>WENV182810452
OJXA01002875
[OJXA] human gut metagenome; human gut
475
545
+
Gly
TCC
[ENA]
¢þ
>WENV182810442
OJXA01002461
[OJXA] human gut metagenome; human gut
486
411
-
Trp
CCA
[ENA]
¢þ
>WENV182810444
OJXA01002470
[OJXA] human gut metagenome; human gut
503
429
-
Ile
GAT
[ENA]
¢þ
>WENV182810453
OJXA01002875
[OJXA] human gut metagenome; human gut
554
629
+
Ile
GAT
[ENA]
¢þ
>WENV182810441
OJXA01002412
[OJXA] human gut metagenome; human gut
602
529
-
Ala
CGC
[ENA]
¢þ
>WENV182810454
OJXA01002875
[OJXA] human gut metagenome; human gut
642
715
+
Glu
TTC
[ENA]
¢þ
>WENV182810446
OJXA01002683
[OJXA] human gut metagenome; human gut
642
718
+
Ile2
CAT
[ENA]
¢þ
>WENV182810440
OJXA01001761
[OJXA] human gut metagenome; human gut
1072
1148
+
Arg
CCT
[ENA]
¢þ
>WENV182810390
OJXA01000253
[OJXA] human gut metagenome; human gut
1139
1055
-
Leu
CAA
[ENA]
¢þ
>WENV182810360
OJXA01000047
[OJXA] human gut metagenome; human gut
1612
1536
-
Arg
TCT
[ENA]
¢þ
>WENV182810351
OJXA01000030
[OJXA] human gut metagenome; human gut
1658
1742
+
Leu
TAG
[ENA]
¢þ
>WENV182810353
OJXA01000034
[OJXA] human gut metagenome; human gut
1693
1768
+
Trp
CCA
[ENA]
¢þ
>WENV182810376
OJXA01000109
[OJXA] human gut metagenome; human gut
1789
1864
+
Asp
GTC
[ENA]
¢þ
>WENV182810377
OJXA01000109
[OJXA] human gut metagenome; human gut
1870
1945
+
Phe
GAA
[ENA]
¢þ
>WENV182810431
OJXA01000811
[OJXA] human gut metagenome; human gut
1945
2017
+
Thr
GGT
[ENA]
¢þ
>WENV182810378
OJXA01000109
[OJXA] human gut metagenome; human gut
1958
2043
+
Leu
GAG
[ENA]
¢þ
>WENV182810409
OJXA01000445
[OJXA] human gut metagenome; human gut
1988
2063
+
Ile2
CAT
[ENA]
¢þ
>WENV182810391
OJXA01000283
[OJXA] human gut metagenome; human gut
2146
2073
-
Lys
CTT
[ENA]
¢þ
>WENV182810439
OJXA01001108
[OJXA] human gut metagenome; human gut
2654
2566
-
Leu
TAA
[ENA]
¢þ
>WENV182810407
OJXA01000444
[OJXA] human gut metagenome; human gut
2701
2776
+
Ala
GGC
[ENA]
¢þ
>WENV182810438
OJXA01001108
[OJXA] human gut metagenome; human gut
2743
2669
-
Cys
GCA
[ENA]
¢þ
>WENV182810432
OJXA01000840
[OJXA] human gut metagenome; human gut
2787
2862
+
Ala
GGC
[ENA]
¢þ
>WENV182810420
OJXA01000657
[OJXA] human gut metagenome; human gut
2788
2863
+
Arg
CCT
[ENA]
¢þ
>WENV182810395
OJXA01000343
[OJXA] human gut metagenome; human gut
2792
2717
-
Phe
GAA
[ENA]
¢þ
>WENV182810408
OJXA01000444
[OJXA] human gut metagenome; human gut
2818
2893
+
Ala
GGC
[ENA]
¢þ
>WENV182810433
OJXA01000840
[OJXA] human gut metagenome; human gut
2904
2979
+
Ala
GGC
[ENA]
¢þ
>WENV182810419
OJXA01000638
[OJXA] human gut metagenome; human gut
3175
3100
-
Phe
GAA
[ENA]
¢þ
>WENV182810405
OJXA01000395
[OJXA] human gut metagenome; human gut
3218
3131
-
Ser
TGA
[ENA]
¢þ
>WENV182810411
OJXA01000502
[OJXA] human gut metagenome; human gut
3519
3593
+
Val
TAC
[ENA]
¢þ
>WENV182810412
OJXA01000502
[OJXA] human gut metagenome; human gut
3598
3672
+
Lys
TTT
[ENA]
¢þ
>WENV182810413
OJXA01000502
[OJXA] human gut metagenome; human gut
3687
3770
+
Leu
TAG
[ENA]
¢þ
>WENV182810414
OJXA01000502
[OJXA] human gut metagenome; human gut
3776
3851
+
Thr
TGT
[ENA]
¢þ
>WENV182810342
OJXA01000017
[OJXA] human gut metagenome; human gut
3796
3721
-
Asn
GTT
[ENA]
¢þ
>WENV182810415
OJXA01000502
[OJXA] human gut metagenome; human gut
3856
3927
+
Gly
GCC
[ENA]
¢þ
>WENV182810393
OJXA01000323
[OJXA] human gut metagenome; human gut
3884
3809
-
Thr
CGT
[ENA]
¢þ
>WENV182810416
OJXA01000502
[OJXA] human gut metagenome; human gut
3943
4028
+
Leu
TAA
[ENA]
¢þ
>WENV182810422
OJXA01000801
[OJXA] human gut metagenome; human gut
3950
4026
+
Met
CAT
[ENA]
¢þ
>WENV182810423
OJXA01000801
[OJXA] human gut metagenome; human gut
4035
4119
+
Leu
TAG
[ENA]
¢þ
>WENV182810417
OJXA01000502
[OJXA] human gut metagenome; human gut
4043
4116
+
Arg
ACG
[ENA]
¢þ
>WENV182810424
OJXA01000801
[OJXA] human gut metagenome; human gut
4154
4228
+
Gln
TTG
[ENA]
¢þ
>WENV182810418
OJXA01000502
[OJXA] human gut metagenome; human gut
4206
4279
+
Pro
TGG
[ENA]
¢þ
>WENV182810425
OJXA01000801
[OJXA] human gut metagenome; human gut
4263
4337
+
Gln
TTG
[ENA]
¢þ
>WENV182810426
OJXA01000801
[OJXA] human gut metagenome; human gut
4359
4435
+
Met
CAT
[ENA]
¢þ
>WENV182810421
OJXA01000734
[OJXA] human gut metagenome; human gut
4454
4360
-
SeC
TCA
[ENA]
¢þ
>WENV182810427
OJXA01000801
[OJXA] human gut metagenome; human gut
4481
4555
+
Gln
CTG
[ENA]
¢þ
>WENV182810429
OJXA01000803
[OJXA] human gut metagenome; human gut
4572
4647
+
Arg
TCT
[ENA]
¢þ
>WENV182810428
OJXA01000801
[OJXA] human gut metagenome; human gut
4653
4727
+
Gln
CTG
[ENA]
¢þ
>WENV182810396
OJXA01000370
[OJXA] human gut metagenome; human gut
6490
6572
+
Tyr
GTA
[ENA]
¢þ
>WENV182810397
OJXA01000370
[OJXA] human gut metagenome; human gut
6576
6649
+
Trp
CCA
[ENA]
¢þ
>WENV182810398
OJXA01000370
[OJXA] human gut metagenome; human gut
6686
6759
+
His
GTG
[ENA]
¢þ
>WENV182810399
OJXA01000370
[OJXA] human gut metagenome; human gut
6772
6845
+
Gln
TTG
[ENA]
¢þ
>WENV182810400
OJXA01000370
[OJXA] human gut metagenome; human gut
6870
6940
+
Cys
GCA
[ENA]
¢þ
>WENV182810401
OJXA01000370
[OJXA] human gut metagenome; human gut
6953
7038
+
Leu
CAA
[ENA]
¢þ
>WENV182810364
OJXA01000055
[OJXA] human gut metagenome; human gut
7309
7219
-
Ser
CGA
[ENA]
¢þ
>WENV182810319
OJXA01000007
[OJXA] human gut metagenome; human gut
7572
7656
+
Tyr
GTA
[ENA]
¢þ
>WENV182810320
OJXA01000007
[OJXA] human gut metagenome; human gut
7867
7951
+
Tyr
GTA
[ENA]
¢þ
>WENV182810317
OJXA01000004
[OJXA] human gut metagenome; human gut
8163
8089
-
Ile2
CAT
[ENA]
¢þ
>WENV182810365
OJXA01000059
[OJXA] human gut metagenome; human gut
8208
8121
-
Ser
GGA
[ENA]
¢þ
>WENV182810389
OJXA01000216
[OJXA] human gut metagenome; human gut
8371
8295
-
Pro
GGG
[ENA]
¢þ
>WENV182810375
OJXA01000090
[OJXA] human gut metagenome; human gut
8547
8637
+
Ser
GGA
[ENA]
¢þ
>WENV182810404
OJXA01000395
[OJXA] human gut metagenome; human gut
8760
8673
-
Ser
TGA
[ENA]
¢þ
>WENV182810403
OJXA01000391
[OJXA] human gut metagenome; human gut
9066
9152
+
Leu
GAG
[ENA]
¢þ
>WENV182810402
OJXA01000388
[OJXA] human gut metagenome; human gut
9393
9469
+
Asp
GTC
[ENA]
¢þ
>WENV182810381
OJXA01000153
[OJXA] human gut metagenome; human gut
12374
12464
+
Ser
GCT
[ENA]
¢þ
>WENV182810341
OJXA01000017
[OJXA] human gut metagenome; human gut
12705
12630
-
Asn
GTT
[ENA]
¢þ
>WENV182810384
OJXA01000167
[OJXA] human gut metagenome; human gut
13620
13545
-
Asn
GTT
[ENA]
¢þ
>WENV182810383
OJXA01000163
[OJXA] human gut metagenome; human gut
13810
13882
+
Arg
CCT
[ENA]
¢þ
>WENV182810335
OJXA01000017
[OJXA] human gut metagenome; human gut
14483
14558
+
Asn
GTT
[ENA]
¢þ
>WENV182810387
OJXA01000190
[OJXA] human gut metagenome; human gut
15391
15464
+
Gly
CCC
[ENA]
¢þ
>WENV182810318
OJXA01000005
[OJXA] human gut metagenome; human gut
16029
15946
-
Leu
CAA
[ENA]
¢þ
>WENV182810386
OJXA01000187
[OJXA] human gut metagenome; human gut
16385
16474
+
Ser
CGA
[ENA]
¢þ
>WENV182810359
OJXA01000043
[OJXA] human gut metagenome; human gut
16859
16783
-
Val
GAC
[ENA]
¢þ
>WENV182810358
OJXA01000043
[OJXA] human gut metagenome; human gut
16940
16864
-
Val
GAC
[ENA]
¢þ
>WENV182810331
OJXA01000012
[OJXA] human gut metagenome; human gut
17437
17362
-
Val
TAC
[ENA]
¢þ
>WENV182810388
OJXA01000215
[OJXA] human gut metagenome; human gut
17450
17375
-
Ile2
CAT
[ENA]
¢þ
>WENV182810330
OJXA01000012
[OJXA] human gut metagenome; human gut
17515
17441
-
Glu
TTC
[ENA]
¢þ
>WENV182810329
OJXA01000012
[OJXA] human gut metagenome; human gut
17595
17520
-
Asn
GTT
[ENA]
¢þ
>WENV182810371
OJXA01000078
[OJXA] human gut metagenome; human gut
18248
18162
-
Leu
CAG
[ENA]
¢þ
>WENV182810370
OJXA01000078
[OJXA] human gut metagenome; human gut
18366
18280
-
Leu
CAG
[ENA]
¢þ
>WENV182810369
OJXA01000078
[OJXA] human gut metagenome; human gut
18481
18395
-
Leu
CAG
[ENA]
¢þ
>WENV182810350
OJXA01000026
[OJXA] human gut metagenome; human gut
19601
19529
-
Arg
CCT
[ENA]
¢þ
>WENV182810382
OJXA01000157
[OJXA] human gut metagenome; human gut
20434
20518
+
Leu
CAA
[ENA]
¢þ
>WENV182810385
OJXA01000172
[OJXA] human gut metagenome; human gut
23212
23285
+
Gly
CCC
[ENA]
¢þ
>WENV182810374
OJXA01000087
[OJXA] human gut metagenome; human gut
24000
24072
+
Thr
CGT
[ENA]
¢þ
>WENV182810380
OJXA01000138
[OJXA] human gut metagenome; human gut
24824
24749
-
Asn
GTT
[ENA]
¢þ
>WENV182810332
OJXA01000013
[OJXA] human gut metagenome; human gut
26003
26076
+
Gly
CCC
[ENA]
¢þ
>WENV182810372
OJXA01000086
[OJXA] human gut metagenome; human gut
26461
26537
+
Pro
TGG
[ENA]
¢þ
>WENV182810379
OJXA01000129
[OJXA] human gut metagenome; human gut
28003
28095
+
Ser
GCT
[ENA]
¢þ
>WENV182810361
OJXA01000055
[OJXA] human gut metagenome; human gut
28074
28150
+
Pro
TGG
[ENA]
¢þ
>WENV182810362
OJXA01000055
[OJXA] human gut metagenome; human gut
28160
28233
+
Gly
TCC
[ENA]
¢þ
>WENV182810363
OJXA01000055
[OJXA] human gut metagenome; human gut
28338
28414
+
Arg
TCT
[ENA]
¢þ
>WENV182810346
OJXA01000024
[OJXA] human gut metagenome; human gut
33284
33359
+
Gly
GCC
[ENA]
¢þ
>WENV182810347
OJXA01000024
[OJXA] human gut metagenome; human gut
33405
33480
+
Gly
GCC
[ENA]
¢þ
>WENV182810348
OJXA01000024
[OJXA] human gut metagenome; human gut
33526
33601
+
Gly
GCC
[ENA]
¢þ
>WENV182810373
OJXA01000086
[OJXA] human gut metagenome; human gut
34175
34250
+
Thr
TGT
[ENA]
¢þ
>WENV182810340
OJXA01000017
[OJXA] human gut metagenome; human gut
34872
34797
-
Asn
GTT
[ENA]
¢þ
>WENV182810336
OJXA01000017
[OJXA] human gut metagenome; human gut
35864
35953
+
Ser
CGA
[ENA]
¢þ
>WENV182810324
OJXA01000012
[OJXA] human gut metagenome; human gut
36072
36147
+
Thr
TGT
[ENA]
¢þ
>WENV182810325
OJXA01000012
[OJXA] human gut metagenome; human gut
36158
36242
+
Tyr
GTA
[ENA]
¢þ
>WENV182810326
OJXA01000012
[OJXA] human gut metagenome; human gut
36248
36323
+
fMet
CAT
[ENA]
¢þ
>WENV182810327
OJXA01000012
[OJXA] human gut metagenome; human gut
36356
36431
+
Thr
GGT
[ENA]
¢þ
>WENV182810328
OJXA01000012
[OJXA] human gut metagenome; human gut
36437
36513
+
Met
CAT
[ENA]
¢þ
>WENV182810354
OJXA01000038
[OJXA] human gut metagenome; human gut
38310
38386
+
Arg
CCG
[ENA]
¢þ
>WENV182810355
OJXA01000038
[OJXA] human gut metagenome; human gut
38442
38517
+
His
GTG
[ENA]
¢þ
>WENV182810356
OJXA01000038
[OJXA] human gut metagenome; human gut
38540
38626
+
Leu
CAG
[ENA]
¢þ
>WENV182810357
OJXA01000038
[OJXA] human gut metagenome; human gut
38672
38748
+
Pro
TGG
[ENA]
¢þ
>WENV182810349
OJXA01000025
[OJXA] human gut metagenome; human gut
40783
40858
+
Phe
GAA
[ENA]
¢þ
>WENV182810334
OJXA01000014
[OJXA] human gut metagenome; human gut
41174
41087
-
Ser
GGA
[ENA]
¢þ
>WENV182810333
OJXA01000014
[OJXA] human gut metagenome; human gut
44103
44016
-
Ser
GGA
[ENA]
¢þ
>WENV182810352
OJXA01000030
[OJXA] human gut metagenome; human gut
56019
56093
+
Arg
CCG
[ENA]
¢þ
>WENV182810345
OJXA01000021
[OJXA] human gut metagenome; human gut
56333
56257
-
Val
GAC
[ENA]
¢þ
>WENV182810344
OJXA01000021
[OJXA] human gut metagenome; human gut
56414
56338
-
Val
GAC
[ENA]
¢þ
>WENV182810343
OJXA01000019
[OJXA] human gut metagenome; human gut
58946
58870
-
Asp
GTC
[ENA]
¢þ
>WENV182810337
OJXA01000017
[OJXA] human gut metagenome; human gut
61023
61098
+
Gly
GCC
[ENA]
¢þ
>WENV182810338
OJXA01000017
[OJXA] human gut metagenome; human gut
61137
61210
+
Cys
GCA
[ENA]
¢þ
>WENV182810339
OJXA01000017
[OJXA] human gut metagenome; human gut
61224
61310
+
Leu
TAA
[ENA]
¢þ
>WENV182810323
OJXA01000011
[OJXA] human gut metagenome; human gut
61734
61821
+
Ser
TGA
[ENA]
¢þ
>WENV182810315
OJXA01000002
[OJXA] human gut metagenome; human gut
64722
64798
+
Arg
CCT
[ENA]
¢þ
>WENV182810322
OJXA01000009
[OJXA] human gut metagenome; human gut
93454
93379
-
Ala
TGC
[ENA]
¢þ
>WENV182810321
OJXA01000009
[OJXA] human gut metagenome; human gut
93660
93584
-
Ile
GAT
[ENA]
¢þ
>WENV182810316
OJXA01000002
[OJXA] human gut metagenome; human gut
124388
124476
+
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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