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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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|
HOW TO USE
tRNA gene List
[OJXB] human gut metagenome; human gut
HIT:
128 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182810488
OJXB01000019
[OJXB] human gut metagenome; human gut
78
2
-
Arg
ACG
[ENA]
¢þ
>WENV182810580
OJXB01000767
[OJXB] human gut metagenome; human gut
78
2
-
Arg
TCT
[ENA]
¢þ
>WENV182810583
OJXB01001088
[OJXB] human gut metagenome; human gut
102
178
+
Ile
GAT
[ENA]
¢þ
>WENV182810585
OJXB01001273
[OJXB] human gut metagenome; human gut
106
17
-
Ser
GGA
[ENA]
¢þ
>WENV182810579
OJXB01000515
[OJXB] human gut metagenome; human gut
113
209
+
SeC
TCA
[ENA]
¢þ
>WENV182810577
OJXB01000293
[OJXB] human gut metagenome; human gut
136
60
-
Ile2
CAT
[ENA]
¢þ
>WENV182810532
OJXB01000059
[OJXB] human gut metagenome; human gut
177
102
-
Val
TAC
[ENA]
¢þ
>WENV182810581
OJXB01000786
[OJXB] human gut metagenome; human gut
187
113
-
Arg
TCG
[ENA]
¢þ
>WENV182810487
OJXB01000019
[OJXB] human gut metagenome; human gut
215
139
-
Arg
ACG
[ENA]
¢þ
>WENV182810584
OJXB01001088
[OJXB] human gut metagenome; human gut
218
293
+
Ala
TGC
[ENA]
¢þ
>WENV182810582
OJXB01000982
[OJXB] human gut metagenome; human gut
268
184
-
Leu
CAA
[ENA]
¢þ
>WENV182810531
OJXB01000059
[OJXB] human gut metagenome; human gut
299
224
-
Val
TAC
[ENA]
¢þ
>WENV182810486
OJXB01000019
[OJXB] human gut metagenome; human gut
312
220
-
Ser
GCT
[ENA]
¢þ
>WENV182810586
OJXB01001484
[OJXB] human gut metagenome; human gut
449
375
-
Arg
CCT
[ENA]
¢þ
>WENV182810549
OJXB01000112
[OJXB] human gut metagenome; human gut
520
593
+
Ile2
CAT
[ENA]
¢þ
>WENV182810497
OJXB01000041
[OJXB] human gut metagenome; human gut
621
549
-
Thr
CGT
[ENA]
¢þ
>WENV182810570
OJXB01000216
[OJXB] human gut metagenome; human gut
656
580
-
Ile2
CAT
[ENA]
¢þ
>WENV182810569
OJXB01000216
[OJXB] human gut metagenome; human gut
738
664
-
Met
CAT
[ENA]
¢þ
>WENV182810568
OJXB01000216
[OJXB] human gut metagenome; human gut
821
746
-
Phe
GAA
[ENA]
¢þ
>WENV182810567
OJXB01000216
[OJXB] human gut metagenome; human gut
916
828
-
Ser
TGA
[ENA]
¢þ
>WENV182810566
OJXB01000216
[OJXB] human gut metagenome; human gut
1032
957
-
Gln
TTG
[ENA]
¢þ
>WENV182810565
OJXB01000216
[OJXB] human gut metagenome; human gut
1118
1043
-
Arg
TCT
[ENA]
¢þ
>WENV182810564
OJXB01000216
[OJXB] human gut metagenome; human gut
1216
1133
-
Leu
TAG
[ENA]
¢þ
>WENV182810553
OJXB01000167
[OJXB] human gut metagenome; human gut
1234
1158
-
Asp
GTC
[ENA]
¢þ
>WENV182810563
OJXB01000216
[OJXB] human gut metagenome; human gut
1319
1235
-
Tyr
GTA
[ENA]
¢þ
>WENV182810562
OJXB01000216
[OJXB] human gut metagenome; human gut
1395
1321
-
Thr
TGT
[ENA]
¢þ
>WENV182810561
OJXB01000216
[OJXB] human gut metagenome; human gut
1487
1411
-
Asp
GTC
[ENA]
¢þ
>WENV182810560
OJXB01000216
[OJXB] human gut metagenome; human gut
1579
1504
-
Val
TAC
[ENA]
¢þ
>WENV182810559
OJXB01000216
[OJXB] human gut metagenome; human gut
1662
1589
-
Gly
TCC
[ENA]
¢þ
>WENV182810558
OJXB01000216
[OJXB] human gut metagenome; human gut
1738
1666
-
Glu
TTC
[ENA]
¢þ
>WENV182810557
OJXB01000216
[OJXB] human gut metagenome; human gut
1837
1762
-
fMet
CAT
[ENA]
¢þ
>WENV182810556
OJXB01000216
[OJXB] human gut metagenome; human gut
1951
1862
-
Leu
TAA
[ENA]
¢þ
>WENV182810555
OJXB01000216
[OJXB] human gut metagenome; human gut
2031
1957
-
Asn
GTT
[ENA]
¢þ
>WENV182810550
OJXB01000119
[OJXB] human gut metagenome; human gut
2501
2576
+
Ile2
CAT
[ENA]
¢þ
>WENV182810528
OJXB01000059
[OJXB] human gut metagenome; human gut
3008
3083
+
Ala
GGC
[ENA]
¢þ
>WENV182810529
OJXB01000059
[OJXB] human gut metagenome; human gut
3125
3200
+
Ala
GGC
[ENA]
¢þ
>WENV182810573
OJXB01000259
[OJXB] human gut metagenome; human gut
3456
3384
-
Gln
CTG
[ENA]
¢þ
>WENV182810574
OJXB01000290
[OJXB] human gut metagenome; human gut
3573
3648
+
Thr
TGT
[ENA]
¢þ
>WENV182810578
OJXB01000325
[OJXB] human gut metagenome; human gut
3592
3516
-
fMet
CAT
[ENA]
¢þ
>WENV182810575
OJXB01000290
[OJXB] human gut metagenome; human gut
3659
3743
+
Tyr
GTA
[ENA]
¢þ
>WENV182810545
OJXB01000102
[OJXB] human gut metagenome; human gut
3741
3814
+
Gly
CCC
[ENA]
¢þ
>WENV182810576
OJXB01000290
[OJXB] human gut metagenome; human gut
3863
3937
+
Gly
TCC
[ENA]
¢þ
>WENV182810537
OJXB01000091
[OJXB] human gut metagenome; human gut
3924
3849
-
Asn
GTT
[ENA]
¢þ
>WENV182810572
OJXB01000233
[OJXB] human gut metagenome; human gut
3959
4043
+
Leu
GAG
[ENA]
¢þ
>WENV182810571
OJXB01000227
[OJXB] human gut metagenome; human gut
4597
4522
-
Thr
TGT
[ENA]
¢þ
>WENV182810543
OJXB01000097
[OJXB] human gut metagenome; human gut
5066
4977
-
Ser
CGA
[ENA]
¢þ
>WENV182810554
OJXB01000216
[OJXB] human gut metagenome; human gut
5364
5289
-
Ala
TGC
[ENA]
¢þ
>WENV182810499
OJXB01000044
[OJXB] human gut metagenome; human gut
5620
5545
-
Arg
CCT
[ENA]
¢þ
>WENV182810540
OJXB01000097
[OJXB] human gut metagenome; human gut
6058
6133
+
Asn
GTT
[ENA]
¢þ
>WENV182810534
OJXB01000070
[OJXB] human gut metagenome; human gut
6931
7018
+
Ser
CGA
[ENA]
¢þ
>WENV182810492
OJXB01000030
[OJXB] human gut metagenome; human gut
7549
7622
+
Arg
CCG
[ENA]
¢þ
>WENV182810552
OJXB01000167
[OJXB] human gut metagenome; human gut
10662
10586
-
Asp
GTC
[ENA]
¢þ
>WENV182810551
OJXB01000127
[OJXB] human gut metagenome; human gut
12043
12118
+
Phe
GAA
[ENA]
¢þ
>WENV182810527
OJXB01000056
[OJXB] human gut metagenome; human gut
12266
12190
-
Pro
GGG
[ENA]
¢þ
>WENV182810459
OJXB01000001
[OJXB] human gut metagenome; human gut
13836
13912
+
Val
GAC
[ENA]
¢þ
>WENV182810460
OJXB01000001
[OJXB] human gut metagenome; human gut
13917
13993
+
Val
GAC
[ENA]
¢þ
>WENV182810461
OJXB01000001
[OJXB] human gut metagenome; human gut
13998
14074
+
Val
GAC
[ENA]
¢þ
>WENV182810539
OJXB01000095
[OJXB] human gut metagenome; human gut
16646
16571
-
Asn
GTT
[ENA]
¢þ
>WENV182810538
OJXB01000095
[OJXB] human gut metagenome; human gut
16861
16933
+
Thr
GGT
[ENA]
¢þ
>WENV182810494
OJXB01000038
[OJXB] human gut metagenome; human gut
18794
18718
-
fMet
CAT
[ENA]
¢þ
>WENV182810536
OJXB01000077
[OJXB] human gut metagenome; human gut
19091
19166
+
Phe
GAA
[ENA]
¢þ
>WENV182810491
OJXB01000028
[OJXB] human gut metagenome; human gut
19346
19420
+
Lys
CTT
[ENA]
¢þ
>WENV182810546
OJXB01000110
[OJXB] human gut metagenome; human gut
19871
19946
+
Gly
GCC
[ENA]
¢þ
>WENV182810547
OJXB01000110
[OJXB] human gut metagenome; human gut
19985
20058
+
Cys
GCA
[ENA]
¢þ
>WENV182810548
OJXB01000110
[OJXB] human gut metagenome; human gut
20072
20158
+
Leu
TAA
[ENA]
¢þ
>WENV182810530
OJXB01000059
[OJXB] human gut metagenome; human gut
20689
20618
-
Arg
CCT
[ENA]
¢þ
>WENV182810475
OJXB01000015
[OJXB] human gut metagenome; human gut
21026
21106
+
Tyr
GTA
[ENA]
¢þ
>WENV182810476
OJXB01000015
[OJXB] human gut metagenome; human gut
21112
21185
+
Gln
TTG
[ENA]
¢þ
>WENV182810471
OJXB01000007
[OJXB] human gut metagenome; human gut
23786
23862
+
Pro
CGG
[ENA]
¢þ
>WENV182810542
OJXB01000097
[OJXB] human gut metagenome; human gut
26048
25973
-
Asn
GTT
[ENA]
¢þ
>WENV182810544
OJXB01000099
[OJXB] human gut metagenome; human gut
27478
27562
+
Leu
CAA
[ENA]
¢þ
>WENV182810541
OJXB01000097
[OJXB] human gut metagenome; human gut
27825
27900
+
Asn
GTT
[ENA]
¢þ
>WENV182810533
OJXB01000067
[OJXB] human gut metagenome; human gut
29574
29480
-
SeC
TCA
[ENA]
¢þ
>WENV182810535
OJXB01000073
[OJXB] human gut metagenome; human gut
32396
32471
+
Ile2
CAT
[ENA]
¢þ
>WENV182810526
OJXB01000055
[OJXB] human gut metagenome; human gut
34610
34523
-
Ser
TGA
[ENA]
¢þ
>WENV182810495
OJXB01000040
[OJXB] human gut metagenome; human gut
45813
45899
+
Leu
GAG
[ENA]
¢þ
>WENV182810496
OJXB01000040
[OJXB] human gut metagenome; human gut
47704
47780
+
fMet
CAT
[ENA]
¢þ
>WENV182810482
OJXB01000017
[OJXB] human gut metagenome; human gut
51554
51478
-
Pro
TGG
[ENA]
¢þ
>WENV182810481
OJXB01000017
[OJXB] human gut metagenome; human gut
51686
51600
-
Leu
CAG
[ENA]
¢þ
>WENV182810480
OJXB01000017
[OJXB] human gut metagenome; human gut
51784
51709
-
His
GTG
[ENA]
¢þ
>WENV182810479
OJXB01000017
[OJXB] human gut metagenome; human gut
51916
51840
-
Arg
CCG
[ENA]
¢þ
>WENV182810525
OJXB01000054
[OJXB] human gut metagenome; human gut
52304
52231
-
Glu
TTC
[ENA]
¢þ
>WENV182810524
OJXB01000054
[OJXB] human gut metagenome; human gut
52389
52314
-
Ile
GAT
[ENA]
¢þ
>WENV182810523
OJXB01000054
[OJXB] human gut metagenome; human gut
52471
52401
-
Gly
TCC
[ENA]
¢þ
>WENV182810522
OJXB01000054
[OJXB] human gut metagenome; human gut
52549
52475
-
Phe
GAA
[ENA]
¢þ
>WENV182810521
OJXB01000054
[OJXB] human gut metagenome; human gut
52625
52551
-
Asp
GTC
[ENA]
¢þ
>WENV182810520
OJXB01000054
[OJXB] human gut metagenome; human gut
52718
52643
-
fMet
CAT
[ENA]
¢þ
>WENV182810519
OJXB01000054
[OJXB] human gut metagenome; human gut
52818
52729
-
Ser
TGA
[ENA]
¢þ
>WENV182810518
OJXB01000054
[OJXB] human gut metagenome; human gut
52914
52841
-
Glu
TTC
[ENA]
¢þ
>WENV182810517
OJXB01000054
[OJXB] human gut metagenome; human gut
53023
52934
-
Ser
GCT
[ENA]
¢þ
>WENV182810516
OJXB01000054
[OJXB] human gut metagenome; human gut
53130
53055
-
Ile
GAT
[ENA]
¢þ
>WENV182810515
OJXB01000054
[OJXB] human gut metagenome; human gut
53212
53142
-
Gly
TCC
[ENA]
¢þ
>WENV182810514
OJXB01000054
[OJXB] human gut metagenome; human gut
53289
53214
-
Asp
GTC
[ENA]
¢þ
>WENV182810513
OJXB01000054
[OJXB] human gut metagenome; human gut
53383
53308
-
fMet
CAT
[ENA]
¢þ
>WENV182810512
OJXB01000054
[OJXB] human gut metagenome; human gut
53483
53394
-
Ser
TGA
[ENA]
¢þ
>WENV182810511
OJXB01000054
[OJXB] human gut metagenome; human gut
53581
53506
-
Ile2
CAT
[ENA]
¢þ
>WENV182810510
OJXB01000054
[OJXB] human gut metagenome; human gut
53668
53593
-
Met
CAT
[ENA]
¢þ
>WENV182810509
OJXB01000054
[OJXB] human gut metagenome; human gut
53767
53695
-
Ala
TGC
[ENA]
¢þ
>WENV182810508
OJXB01000054
[OJXB] human gut metagenome; human gut
53860
53787
-
Pro
TGG
[ENA]
¢þ
>WENV182810507
OJXB01000054
[OJXB] human gut metagenome; human gut
53944
53869
-
Arg
ACG
[ENA]
¢þ
>WENV182810506
OJXB01000054
[OJXB] human gut metagenome; human gut
54039
53954
-
Leu
TAA
[ENA]
¢þ
>WENV182810505
OJXB01000054
[OJXB] human gut metagenome; human gut
54127
54056
-
Gly
GCC
[ENA]
¢þ
>WENV182810504
OJXB01000054
[OJXB] human gut metagenome; human gut
54212
54137
-
Thr
TGT
[ENA]
¢þ
>WENV182810503
OJXB01000054
[OJXB] human gut metagenome; human gut
54311
54228
-
Leu
TAG
[ENA]
¢þ
>WENV182810502
OJXB01000054
[OJXB] human gut metagenome; human gut
54391
54317
-
Lys
TTT
[ENA]
¢þ
>WENV182810501
OJXB01000054
[OJXB] human gut metagenome; human gut
54467
54393
-
Val
TAC
[ENA]
¢þ
>WENV182810498
OJXB01000044
[OJXB] human gut metagenome; human gut
59735
59661
-
Arg
TCT
[ENA]
¢þ
>WENV182810500
OJXB01000047
[OJXB] human gut metagenome; human gut
60298
60373
+
Lys
TTT
[ENA]
¢þ
>WENV182810493
OJXB01000030
[OJXB] human gut metagenome; human gut
63547
63477
-
Gly
CCC
[ENA]
¢þ
>WENV182810472
OJXB01000009
[OJXB] human gut metagenome; human gut
71176
71262
+
Leu
CAG
[ENA]
¢þ
>WENV182810473
OJXB01000009
[OJXB] human gut metagenome; human gut
71291
71377
+
Leu
CAG
[ENA]
¢þ
>WENV182810474
OJXB01000009
[OJXB] human gut metagenome; human gut
71409
71495
+
Leu
CAG
[ENA]
¢þ
>WENV182810485
OJXB01000018
[OJXB] human gut metagenome; human gut
73491
73416
-
Gly
GCC
[ENA]
¢þ
>WENV182810484
OJXB01000018
[OJXB] human gut metagenome; human gut
73591
73516
-
Gly
GCC
[ENA]
¢þ
>WENV182810483
OJXB01000018
[OJXB] human gut metagenome; human gut
73691
73616
-
Gly
GCC
[ENA]
¢þ
>WENV182810490
OJXB01000025
[OJXB] human gut metagenome; human gut
86007
86092
+
Leu
CAG
[ENA]
¢þ
>WENV182810489
OJXB01000023
[OJXB] human gut metagenome; human gut
87027
87102
+
Thr
CGT
[ENA]
¢þ
>WENV182810477
OJXB01000016
[OJXB] human gut metagenome; human gut
95166
95253
+
Ser
GGA
[ENA]
¢þ
>WENV182810478
OJXB01000017
[OJXB] human gut metagenome; human gut
96820
96745
-
Trp
CCA
[ENA]
¢þ
>WENV182810470
OJXB01000003
[OJXB] human gut metagenome; human gut
160364
160290
-
Gln
CTG
[ENA]
¢þ
>WENV182810469
OJXB01000003
[OJXB] human gut metagenome; human gut
160536
160462
-
Gln
CTG
[ENA]
¢þ
>WENV182810468
OJXB01000003
[OJXB] human gut metagenome; human gut
160658
160582
-
Met
CAT
[ENA]
¢þ
>WENV182810467
OJXB01000003
[OJXB] human gut metagenome; human gut
160755
160681
-
Gln
TTG
[ENA]
¢þ
>WENV182810466
OJXB01000003
[OJXB] human gut metagenome; human gut
160864
160790
-
Gln
TTG
[ENA]
¢þ
>WENV182810465
OJXB01000003
[OJXB] human gut metagenome; human gut
160984
160900
-
Leu
TAG
[ENA]
¢þ
>WENV182810464
OJXB01000003
[OJXB] human gut metagenome; human gut
161069
160993
-
Met
CAT
[ENA]
¢þ
>WENV182810462
OJXB01000001
[OJXB] human gut metagenome; human gut
183055
183139
+
Tyr
GTA
[ENA]
¢þ
>WENV182810463
OJXB01000001
[OJXB] human gut metagenome; human gut
183175
183259
+
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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