This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJXD] human gut metagenome; human gut
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182810702
OJXD01001161
[OJXD] human gut metagenome; human gut
32
122
+
Ser
GGA
[ENA]
¢þ
>WENV182810681
OJXD01000364
[OJXD] human gut metagenome; human gut
63
138
+
Phe
GAA
[ENA]
¢þ
>WENV182810718
OJXD01002502
[OJXD] human gut metagenome; human gut
65
139
+
Cys
GCA
[ENA]
¢þ
>WENV182810656
OJXD01000038
[OJXD] human gut metagenome; human gut
71
147
+
Val
GAC
[ENA]
¢þ
>WENV182810724
OJXD01003204
[OJXD] human gut metagenome; human gut
75
1
-
Ala
GGC
[ENA]
¢þ
>WENV182810714
OJXD01001917
[OJXD] human gut metagenome; human gut
98
173
+
Trp
CCA
[ENA]
¢þ
>WENV182810682
OJXD01000364
[OJXD] human gut metagenome; human gut
144
218
+
Thr
TGT
[ENA]
¢þ
>WENV182810719
OJXD01002502
[OJXD] human gut metagenome; human gut
154
242
+
Leu
TAA
[ENA]
¢þ
>WENV182810723
OJXD01002854
[OJXD] human gut metagenome; human gut
172
96
-
Arg
TCT
[ENA]
¢þ
>WENV182810715
OJXD01002113
[OJXD] human gut metagenome; human gut
220
295
+
Trp
CCA
[ENA]
¢þ
>WENV182810726
OJXD01003235
[OJXD] human gut metagenome; human gut
243
170
-
Gln
TTG
[ENA]
¢þ
>WENV182810673
OJXD01000154
[OJXD] human gut metagenome; human gut
244
168
-
Pro
CGG
[ENA]
¢þ
>WENV182810725
OJXD01003235
[OJXD] human gut metagenome; human gut
333
251
-
Tyr
GTA
[ENA]
¢þ
>WENV182810722
OJXD01002854
[OJXD] human gut metagenome; human gut
347
274
-
Gly
TCC
[ENA]
¢þ
>WENV182810709
OJXD01001490
[OJXD] human gut metagenome; human gut
356
280
-
Arg
CCT
[ENA]
¢þ
>WENV182810716
OJXD01002113
[OJXD] human gut metagenome; human gut
408
484
+
Arg
ACG
[ENA]
¢þ
>WENV182810721
OJXD01002854
[OJXD] human gut metagenome; human gut
434
358
-
Pro
TGG
[ENA]
¢þ
>WENV182810720
OJXD01002635
[OJXD] human gut metagenome; human gut
545
637
+
Ser
GCT
[ENA]
¢þ
>WENV182810717
OJXD01002350
[OJXD] human gut metagenome; human gut
746
673
-
Gly
CCC
[ENA]
¢þ
>WENV182810703
OJXD01001193
[OJXD] human gut metagenome; human gut
757
681
-
Arg
TCT
[ENA]
¢þ
>WENV182810676
OJXD01000183
[OJXD] human gut metagenome; human gut
978
903
-
Lys
TTT
[ENA]
¢þ
>WENV182810689
OJXD01000573
[OJXD] human gut metagenome; human gut
990
918
-
Arg
CCT
[ENA]
¢þ
>WENV182810706
OJXD01001348
[OJXD] human gut metagenome; human gut
1037
1112
+
Phe
GAA
[ENA]
¢þ
>WENV182810675
OJXD01000183
[OJXD] human gut metagenome; human gut
1057
983
-
Gln
TTG
[ENA]
¢þ
>WENV182810711
OJXD01001706
[OJXD] human gut metagenome; human gut
1118
1192
+
Val
TAC
[ENA]
¢þ
>WENV182810674
OJXD01000183
[OJXD] human gut metagenome; human gut
1157
1082
-
His
GTG
[ENA]
¢þ
>WENV182810712
OJXD01001706
[OJXD] human gut metagenome; human gut
1197
1271
+
Lys
TTT
[ENA]
¢þ
>WENV182810691
OJXD01000589
[OJXD] human gut metagenome; human gut
1231
1307
+
Pro
TGG
[ENA]
¢þ
>WENV182810683
OJXD01000412
[OJXD] human gut metagenome; human gut
1263
1188
-
Ile2
CAT
[ENA]
¢þ
>WENV182810713
OJXD01001706
[OJXD] human gut metagenome; human gut
1286
1369
+
Leu
TAG
[ENA]
¢þ
>WENV182810710
OJXD01001633
[OJXD] human gut metagenome; human gut
1309
1234
-
Glu
TTC
[ENA]
¢þ
>WENV182810701
OJXD01001046
[OJXD] human gut metagenome; human gut
1344
1269
-
Thr
GGT
[ENA]
¢þ
>WENV182810700
OJXD01001046
[OJXD] human gut metagenome; human gut
1424
1350
-
Gly
TCC
[ENA]
¢þ
>WENV182810707
OJXD01001393
[OJXD] human gut metagenome; human gut
1459
1547
+
Ser
TGA
[ENA]
¢þ
>WENV182810684
OJXD01000413
[OJXD] human gut metagenome; human gut
1471
1381
-
Ser
CGA
[ENA]
¢þ
>WENV182810699
OJXD01001046
[OJXD] human gut metagenome; human gut
1624
1540
-
Tyr
GTA
[ENA]
¢þ
>WENV182810698
OJXD01001046
[OJXD] human gut metagenome; human gut
1710
1635
-
Thr
TGT
[ENA]
¢þ
>WENV182810705
OJXD01001290
[OJXD] human gut metagenome; human gut
1732
1656
-
Arg
ACG
[ENA]
¢þ
>WENV182810688
OJXD01000550
[OJXD] human gut metagenome; human gut
1769
1843
+
Ile2
CAT
[ENA]
¢þ
>WENV182810708
OJXD01001417
[OJXD] human gut metagenome; human gut
1783
1689
-
SeC
TCA
[ENA]
¢þ
>WENV182810704
OJXD01001290
[OJXD] human gut metagenome; human gut
1870
1794
-
Arg
ACG
[ENA]
¢þ
>WENV182810685
OJXD01000430
[OJXD] human gut metagenome; human gut
2205
2131
-
Arg
CCG
[ENA]
¢þ
>WENV182810697
OJXD01000903
[OJXD] human gut metagenome; human gut
2310
2220
-
Ser
GCT
[ENA]
¢þ
>WENV182810690
OJXD01000581
[OJXD] human gut metagenome; human gut
2412
2498
+
Leu
GAG
[ENA]
¢þ
>WENV182810694
OJXD01000635
[OJXD] human gut metagenome; human gut
2451
2366
-
Leu
GAG
[ENA]
¢þ
>WENV182810693
OJXD01000635
[OJXD] human gut metagenome; human gut
2539
2464
-
Phe
GAA
[ENA]
¢þ
>WENV182810692
OJXD01000635
[OJXD] human gut metagenome; human gut
2636
2561
-
Asp
GTC
[ENA]
¢þ
>WENV182810655
OJXD01000032
[OJXD] human gut metagenome; human gut
2785
2861
+
Arg
TCT
[ENA]
¢þ
>WENV182810695
OJXD01000684
[OJXD] human gut metagenome; human gut
2918
2993
+
Phe
GAA
[ENA]
¢þ
>WENV182810680
OJXD01000331
[OJXD] human gut metagenome; human gut
3220
3296
+
Pro
GGG
[ENA]
¢þ
>WENV182810686
OJXD01000480
[OJXD] human gut metagenome; human gut
3307
3231
-
Asp
GTC
[ENA]
¢þ
>WENV182810696
OJXD01000735
[OJXD] human gut metagenome; human gut
3334
3250
-
Leu
CAA
[ENA]
¢þ
>WENV182810687
OJXD01000527
[OJXD] human gut metagenome; human gut
3926
3839
-
Ser
TGA
[ENA]
¢þ
>WENV182810652
OJXD01000025
[OJXD] human gut metagenome; human gut
4058
3972
-
Leu
GAG
[ENA]
¢þ
>WENV182810679
OJXD01000244
[OJXD] human gut metagenome; human gut
7388
7315
-
Gly
CCC
[ENA]
¢þ
>WENV182810669
OJXD01000129
[OJXD] human gut metagenome; human gut
8331
8256
-
Val
TAC
[ENA]
¢þ
>WENV182810668
OJXD01000129
[OJXD] human gut metagenome; human gut
8411
8337
-
Glu
TTC
[ENA]
¢þ
>WENV182810667
OJXD01000129
[OJXD] human gut metagenome; human gut
8492
8417
-
Lys
TTT
[ENA]
¢þ
>WENV182810666
OJXD01000129
[OJXD] human gut metagenome; human gut
8571
8496
-
Asn
GTT
[ENA]
¢þ
>WENV182810665
OJXD01000129
[OJXD] human gut metagenome; human gut
8651
8577
-
Gly
GCC
[ENA]
¢þ
>WENV182810671
OJXD01000132
[OJXD] human gut metagenome; human gut
8702
8618
-
Tyr
GTA
[ENA]
¢þ
>WENV182810670
OJXD01000132
[OJXD] human gut metagenome; human gut
9002
8918
-
Tyr
GTA
[ENA]
¢þ
>WENV182810672
OJXD01000152
[OJXD] human gut metagenome; human gut
9769
9682
-
Ser
GGA
[ENA]
¢þ
>WENV182810678
OJXD01000216
[OJXD] human gut metagenome; human gut
10192
10267
+
Thr
CGT
[ENA]
¢þ
>WENV182810645
OJXD01000011
[OJXD] human gut metagenome; human gut
10628
10539
-
Ser
CGA
[ENA]
¢þ
>WENV182810677
OJXD01000198
[OJXD] human gut metagenome; human gut
11348
11273
-
Trp
CCA
[ENA]
¢þ
>WENV182810641
OJXD01000011
[OJXD] human gut metagenome; human gut
11620
11695
+
Asn
GTT
[ENA]
¢þ
>WENV182810664
OJXD01000081
[OJXD] human gut metagenome; human gut
12036
11950
-
Leu
TAA
[ENA]
¢þ
>WENV182810658
OJXD01000044
[OJXD] human gut metagenome; human gut
12045
12119
+
Arg
CCT
[ENA]
¢þ
>WENV182810663
OJXD01000081
[OJXD] human gut metagenome; human gut
12123
12050
-
Cys
GCA
[ENA]
¢þ
>WENV182810662
OJXD01000081
[OJXD] human gut metagenome; human gut
12239
12164
-
Gly
GCC
[ENA]
¢þ
>WENV182810636
OJXD01000008
[OJXD] human gut metagenome; human gut
15345
15421
+
Arg
CCG
[ENA]
¢þ
>WENV182810637
OJXD01000008
[OJXD] human gut metagenome; human gut
15477
15552
+
His
GTG
[ENA]
¢þ
>WENV182810638
OJXD01000008
[OJXD] human gut metagenome; human gut
15576
15662
+
Leu
CAG
[ENA]
¢þ
>WENV182810639
OJXD01000008
[OJXD] human gut metagenome; human gut
15705
15781
+
Pro
TGG
[ENA]
¢þ
>WENV182810642
OJXD01000011
[OJXD] human gut metagenome; human gut
16860
16935
+
Asn
GTT
[ENA]
¢þ
>WENV182810661
OJXD01000067
[OJXD] human gut metagenome; human gut
17910
17983
+
Gly
CCC
[ENA]
¢þ
>WENV182810644
OJXD01000011
[OJXD] human gut metagenome; human gut
25858
25783
-
Asn
GTT
[ENA]
¢þ
>WENV182810643
OJXD01000011
[OJXD] human gut metagenome; human gut
27616
27691
+
Asn
GTT
[ENA]
¢þ
>WENV182810628
OJXD01000005
[OJXD] human gut metagenome; human gut
28426
28351
-
Thr
CGT
[ENA]
¢þ
>WENV182810651
OJXD01000018
[OJXD] human gut metagenome; human gut
32036
31961
-
Phe
GAA
[ENA]
¢þ
>WENV182810640
OJXD01000009
[OJXD] human gut metagenome; human gut
32292
32205
-
Ser
TGA
[ENA]
¢þ
>WENV182810660
OJXD01000044
[OJXD] human gut metagenome; human gut
32517
32442
-
Ala
GGC
[ENA]
¢þ
>WENV182810659
OJXD01000044
[OJXD] human gut metagenome; human gut
32634
32559
-
Ala
GGC
[ENA]
¢þ
>WENV182810657
OJXD01000039
[OJXD] human gut metagenome; human gut
36637
36543
-
SeC
TCA
[ENA]
¢þ
>WENV182810654
OJXD01000031
[OJXD] human gut metagenome; human gut
37007
36932
-
Phe
GAA
[ENA]
¢þ
>WENV182810646
OJXD01000015
[OJXD] human gut metagenome; human gut
38539
38615
+
fMet
CAT
[ENA]
¢þ
>WENV182810647
OJXD01000015
[OJXD] human gut metagenome; human gut
38648
38724
+
fMet
CAT
[ENA]
¢þ
>WENV182810648
OJXD01000015
[OJXD] human gut metagenome; human gut
38757
38833
+
fMet
CAT
[ENA]
¢þ
>WENV182810629
OJXD01000007
[OJXD] human gut metagenome; human gut
39942
40018
+
Met
CAT
[ENA]
¢þ
>WENV182810630
OJXD01000007
[OJXD] human gut metagenome; human gut
40027
40111
+
Leu
TAG
[ENA]
¢þ
>WENV182810631
OJXD01000007
[OJXD] human gut metagenome; human gut
40135
40209
+
Gln
TTG
[ENA]
¢þ
>WENV182810632
OJXD01000007
[OJXD] human gut metagenome; human gut
40246
40320
+
Gln
TTG
[ENA]
¢þ
>WENV182810653
OJXD01000028
[OJXD] human gut metagenome; human gut
40328
40253
-
Ile2
CAT
[ENA]
¢þ
>WENV182810633
OJXD01000007
[OJXD] human gut metagenome; human gut
40344
40420
+
Met
CAT
[ENA]
¢þ
>WENV182810634
OJXD01000007
[OJXD] human gut metagenome; human gut
40468
40542
+
Gln
CTG
[ENA]
¢þ
>WENV182810650
OJXD01000016
[OJXD] human gut metagenome; human gut
40501
40415
-
Leu
CAG
[ENA]
¢þ
>WENV182810635
OJXD01000007
[OJXD] human gut metagenome; human gut
40618
40692
+
Gln
CTG
[ENA]
¢þ
>WENV182810649
OJXD01000016
[OJXD] human gut metagenome; human gut
40619
40533
-
Leu
CAG
[ENA]
¢þ
>WENV182810627
OJXD01000004
[OJXD] human gut metagenome; human gut
63341
63417
+
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK