This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJXH] human gut metagenome; human gut
HIT:
153 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182811064
OJXH01006518
[OJXH] human gut metagenome; human gut
49
124
+
Asn
GTT
[ENA]
¢þ
>WENV182811045
OJXH01002779
[OJXH] human gut metagenome; human gut
62
135
+
Lys
TTT
[ENA]
¢þ
>WENV182811055
OJXH01005296
[OJXH] human gut metagenome; human gut
64
153
+
Ser
TGA
[ENA]
¢þ
>WENV182811067
OJXH01007335
[OJXH] human gut metagenome; human gut
66
142
+
Val
GAC
[ENA]
¢þ
>WENV182811066
OJXH01007132
[OJXH] human gut metagenome; human gut
98
174
+
Met
CAT
[ENA]
¢þ
>WENV182810990
OJXH01000058
[OJXH] human gut metagenome; human gut
114
39
-
Phe
GAA
[ENA]
¢þ
>WENV182810950
OJXH01000021
[OJXH] human gut metagenome; human gut
116
192
+
Arg
ACG
[ENA]
¢þ
>WENV182811049
OJXH01004457
[OJXH] human gut metagenome; human gut
121
196
+
Glu
TTC
[ENA]
¢þ
>WENV182811011
OJXH01000251
[OJXH] human gut metagenome; human gut
131
57
-
Asn
GTT
[ENA]
¢þ
>WENV182811056
OJXH01005296
[OJXH] human gut metagenome; human gut
186
261
+
fMet
CAT
[ENA]
¢þ
>WENV182811010
OJXH01000251
[OJXH] human gut metagenome; human gut
219
146
-
Gly
TCC
[ENA]
¢þ
>WENV182811063
OJXH01005872
[OJXH] human gut metagenome; human gut
233
308
+
Gly
GCC
[ENA]
¢þ
>WENV182811065
OJXH01007103
[OJXH] human gut metagenome; human gut
281
357
+
Arg
ACG
[ENA]
¢þ
>WENV182811057
OJXH01005296
[OJXH] human gut metagenome; human gut
309
385
+
Asp
GTC
[ENA]
¢þ
>WENV182811009
OJXH01000251
[OJXH] human gut metagenome; human gut
310
235
-
His
GTG
[ENA]
¢þ
>WENV182811050
OJXH01005098
[OJXH] human gut metagenome; human gut
340
415
+
Thr
TGT
[ENA]
¢þ
>WENV182811025
OJXH01000595
[OJXH] human gut metagenome; human gut
351
276
-
Thr
GGT
[ENA]
¢þ
>WENV182811061
OJXH01005852
[OJXH] human gut metagenome; human gut
369
444
+
Asn
GTT
[ENA]
¢þ
>WENV182811054
OJXH01005252
[OJXH] human gut metagenome; human gut
374
291
-
Leu
CAA
[ENA]
¢þ
>WENV182811038
OJXH01001548
[OJXH] human gut metagenome; human gut
376
300
-
fMet
CAT
[ENA]
¢þ
>WENV182811058
OJXH01005296
[OJXH] human gut metagenome; human gut
387
457
+
Gly
TCC
[ENA]
¢þ
>WENV182811008
OJXH01000251
[OJXH] human gut metagenome; human gut
396
324
-
Phe
GAA
[ENA]
¢þ
>WENV182810951
OJXH01000021
[OJXH] human gut metagenome; human gut
421
497
+
Arg
ACG
[ENA]
¢þ
>WENV182811024
OJXH01000595
[OJXH] human gut metagenome; human gut
431
357
-
Gly
TCC
[ENA]
¢þ
>WENV182811059
OJXH01005296
[OJXH] human gut metagenome; human gut
466
541
+
Ile
GAT
[ENA]
¢þ
>WENV182811051
OJXH01005098
[OJXH] human gut metagenome; human gut
470
553
+
Tyr
GTA
[ENA]
¢þ
>WENV182811007
OJXH01000251
[OJXH] human gut metagenome; human gut
488
413
-
Asp
GTC
[ENA]
¢þ
>WENV182811037
OJXH01001548
[OJXH] human gut metagenome; human gut
499
415
-
Leu
GAG
[ENA]
¢þ
>WENV182811047
OJXH01004409
[OJXH] human gut metagenome; human gut
530
606
+
Pro
TGG
[ENA]
¢þ
>WENV182811034
OJXH01000643
[OJXH] human gut metagenome; human gut
535
463
-
Ala
TGC
[ENA]
¢þ
>WENV182811060
OJXH01005296
[OJXH] human gut metagenome; human gut
550
639
+
Ser
GCT
[ENA]
¢þ
>WENV182811006
OJXH01000251
[OJXH] human gut metagenome; human gut
571
498
-
fMet
CAT
[ENA]
¢þ
>WENV182811062
OJXH01005860
[OJXH] human gut metagenome; human gut
576
486
-
Ser
GCT
[ENA]
¢þ
>WENV182811052
OJXH01005098
[OJXH] human gut metagenome; human gut
591
666
+
Gly
TCC
[ENA]
¢þ
>WENV182811046
OJXH01003000
[OJXH] human gut metagenome; human gut
596
667
+
Trp
CCA
[ENA]
¢þ
>WENV182811023
OJXH01000595
[OJXH] human gut metagenome; human gut
631
547
-
Tyr
GTA
[ENA]
¢þ
>WENV182811033
OJXH01000643
[OJXH] human gut metagenome; human gut
632
559
-
Pro
TGG
[ENA]
¢þ
>WENV182811053
OJXH01005252
[OJXH] human gut metagenome; human gut
658
585
-
Cys
GCA
[ENA]
¢þ
>WENV182811003
OJXH01000204
[OJXH] human gut metagenome; human gut
660
585
-
Arg
TCT
[ENA]
¢þ
>WENV182811048
OJXH01004409
[OJXH] human gut metagenome; human gut
663
739
+
Arg
TCT
[ENA]
¢þ
>WENV182811032
OJXH01000643
[OJXH] human gut metagenome; human gut
716
641
-
Arg
ACG
[ENA]
¢þ
>WENV182811022
OJXH01000595
[OJXH] human gut metagenome; human gut
717
642
-
Thr
TGT
[ENA]
¢þ
>WENV182811042
OJXH01002136
[OJXH] human gut metagenome; human gut
718
643
-
Glu
TTC
[ENA]
¢þ
>WENV182811041
OJXH01002136
[OJXH] human gut metagenome; human gut
819
744
-
Ala
GGC
[ENA]
¢þ
>WENV182811031
OJXH01000643
[OJXH] human gut metagenome; human gut
822
734
-
Leu
TAA
[ENA]
¢þ
>WENV182811044
OJXH01002377
[OJXH] human gut metagenome; human gut
869
794
-
Ala
TGC
[ENA]
¢þ
>WENV182811030
OJXH01000643
[OJXH] human gut metagenome; human gut
909
838
-
Gly
GCC
[ENA]
¢þ
>WENV182811029
OJXH01000643
[OJXH] human gut metagenome; human gut
989
914
-
Thr
TGT
[ENA]
¢þ
>WENV182811043
OJXH01002377
[OJXH] human gut metagenome; human gut
1001
925
-
Ile
GAT
[ENA]
¢þ
>WENV182811028
OJXH01000643
[OJXH] human gut metagenome; human gut
1078
995
-
Leu
TAG
[ENA]
¢þ
>WENV182811027
OJXH01000643
[OJXH] human gut metagenome; human gut
1167
1093
-
Lys
TTT
[ENA]
¢þ
>WENV182811026
OJXH01000643
[OJXH] human gut metagenome; human gut
1246
1172
-
Val
TAC
[ENA]
¢þ
>WENV182811035
OJXH01000834
[OJXH] human gut metagenome; human gut
1249
1163
-
Leu
CAA
[ENA]
¢þ
>WENV182811040
OJXH01001598
[OJXH] human gut metagenome; human gut
1477
1402
-
Ala
TGC
[ENA]
¢þ
>WENV182811036
OJXH01001319
[OJXH] human gut metagenome; human gut
1513
1588
+
Phe
GAA
[ENA]
¢þ
>WENV182811039
OJXH01001598
[OJXH] human gut metagenome; human gut
1564
1488
-
Ile
GAT
[ENA]
¢þ
>WENV182811021
OJXH01000586
[OJXH] human gut metagenome; human gut
2947
3019
+
Thr
CGT
[ENA]
¢þ
>WENV182811020
OJXH01000549
[OJXH] human gut metagenome; human gut
3435
3361
-
Thr
TGT
[ENA]
¢þ
>WENV182811019
OJXH01000549
[OJXH] human gut metagenome; human gut
3515
3441
-
Asn
GTT
[ENA]
¢þ
>WENV182811018
OJXH01000388
[OJXH] human gut metagenome; human gut
3572
3486
-
Leu
GAG
[ENA]
¢þ
>WENV182811014
OJXH01000378
[OJXH] human gut metagenome; human gut
3769
3851
+
Tyr
GTA
[ENA]
¢þ
>WENV182811015
OJXH01000378
[OJXH] human gut metagenome; human gut
3859
3932
+
Gln
TTG
[ENA]
¢þ
>WENV182811016
OJXH01000378
[OJXH] human gut metagenome; human gut
3957
4027
+
Cys
GCA
[ENA]
¢þ
>WENV182811013
OJXH01000353
[OJXH] human gut metagenome; human gut
4028
4100
+
Arg
CCG
[ENA]
¢þ
>WENV182811017
OJXH01000378
[OJXH] human gut metagenome; human gut
4040
4125
+
Leu
CAA
[ENA]
¢þ
>WENV182810931
OJXH01000005
[OJXH] human gut metagenome; human gut
4113
4197
+
Tyr
GTA
[ENA]
¢þ
>WENV182810932
OJXH01000005
[OJXH] human gut metagenome; human gut
4413
4497
+
Tyr
GTA
[ENA]
¢þ
>WENV182811002
OJXH01000185
[OJXH] human gut metagenome; human gut
5454
5529
+
Arg
CCT
[ENA]
¢þ
>WENV182810998
OJXH01000131
[OJXH] human gut metagenome; human gut
5770
5845
+
Gly
GCC
[ENA]
¢þ
>WENV182810999
OJXH01000131
[OJXH] human gut metagenome; human gut
5914
5989
+
Gly
GCC
[ENA]
¢þ
>WENV182811000
OJXH01000131
[OJXH] human gut metagenome; human gut
6058
6133
+
Gly
GCC
[ENA]
¢þ
>WENV182811012
OJXH01000345
[OJXH] human gut metagenome; human gut
7117
7044
-
Arg
CCG
[ENA]
¢þ
>WENV182810980
OJXH01000034
[OJXH] human gut metagenome; human gut
7188
7102
-
Leu
TAA
[ENA]
¢þ
>WENV182810979
OJXH01000034
[OJXH] human gut metagenome; human gut
7275
7202
-
Cys
GCA
[ENA]
¢þ
>WENV182810978
OJXH01000034
[OJXH] human gut metagenome; human gut
7391
7316
-
Gly
GCC
[ENA]
¢þ
>WENV182811005
OJXH01000215
[OJXH] human gut metagenome; human gut
7393
7317
-
fMet
CAT
[ENA]
¢þ
>WENV182811001
OJXH01000170
[OJXH] human gut metagenome; human gut
9014
9103
+
Ser
CGA
[ENA]
¢þ
>WENV182811004
OJXH01000215
[OJXH] human gut metagenome; human gut
11409
11323
-
Leu
GAG
[ENA]
¢þ
>WENV182810996
OJXH01000102
[OJXH] human gut metagenome; human gut
14075
13999
-
Asp
GTC
[ENA]
¢þ
>WENV182810989
OJXH01000049
[OJXH] human gut metagenome; human gut
16706
16782
+
Arg
CCT
[ENA]
¢þ
>WENV182810968
OJXH01000031
[OJXH] human gut metagenome; human gut
17302
17377
+
Thr
TGT
[ENA]
¢þ
>WENV182810969
OJXH01000031
[OJXH] human gut metagenome; human gut
17388
17472
+
Tyr
GTA
[ENA]
¢þ
>WENV182810970
OJXH01000031
[OJXH] human gut metagenome; human gut
17478
17553
+
fMet
CAT
[ENA]
¢þ
>WENV182810971
OJXH01000031
[OJXH] human gut metagenome; human gut
17585
17660
+
Thr
GGT
[ENA]
¢þ
>WENV182810972
OJXH01000031
[OJXH] human gut metagenome; human gut
17666
17742
+
Met
CAT
[ENA]
¢þ
>WENV182810997
OJXH01000110
[OJXH] human gut metagenome; human gut
18961
19036
+
Arg
TCT
[ENA]
¢þ
>WENV182810988
OJXH01000044
[OJXH] human gut metagenome; human gut
19712
19628
-
Leu
CAA
[ENA]
¢þ
>WENV182810994
OJXH01000083
[OJXH] human gut metagenome; human gut
20765
20836
+
Glu
TTC
[ENA]
¢þ
>WENV182810995
OJXH01000102
[OJXH] human gut metagenome; human gut
23527
23451
-
Asp
GTC
[ENA]
¢þ
>WENV182810993
OJXH01000076
[OJXH] human gut metagenome; human gut
24461
24385
-
Arg
TCT
[ENA]
¢þ
>WENV182810977
OJXH01000034
[OJXH] human gut metagenome; human gut
28588
28499
-
Ser
CGA
[ENA]
¢þ
>WENV182810991
OJXH01000064
[OJXH] human gut metagenome; human gut
28842
28934
+
Ser
TGA
[ENA]
¢þ
>WENV182810973
OJXH01000034
[OJXH] human gut metagenome; human gut
29580
29655
+
Asn
GTT
[ENA]
¢þ
>WENV182810943
OJXH01000010
[OJXH] human gut metagenome; human gut
32915
32825
-
Ser
GGA
[ENA]
¢þ
>WENV182810992
OJXH01000073
[OJXH] human gut metagenome; human gut
33078
33004
-
Gln
CTG
[ENA]
¢þ
>WENV182810974
OJXH01000034
[OJXH] human gut metagenome; human gut
34820
34895
+
Asn
GTT
[ENA]
¢þ
>WENV182810967
OJXH01000030
[OJXH] human gut metagenome; human gut
36562
36486
-
Val
GAC
[ENA]
¢þ
>WENV182810964
OJXH01000028
[OJXH] human gut metagenome; human gut
36605
36529
-
Pro
TGG
[ENA]
¢þ
>WENV182810966
OJXH01000030
[OJXH] human gut metagenome; human gut
36643
36567
-
Val
GAC
[ENA]
¢þ
>WENV182810965
OJXH01000030
[OJXH] human gut metagenome; human gut
36724
36648
-
Val
GAC
[ENA]
¢þ
>WENV182810963
OJXH01000028
[OJXH] human gut metagenome; human gut
36734
36648
-
Leu
CAG
[ENA]
¢þ
>WENV182810962
OJXH01000028
[OJXH] human gut metagenome; human gut
36833
36758
-
His
GTG
[ENA]
¢þ
>WENV182810961
OJXH01000028
[OJXH] human gut metagenome; human gut
36965
36889
-
Arg
CCG
[ENA]
¢þ
>WENV182810929
OJXH01000004
[OJXH] human gut metagenome; human gut
39369
39442
+
Gly
CCC
[ENA]
¢þ
>WENV182810959
OJXH01000027
[OJXH] human gut metagenome; human gut
43701
43789
+
Ser
TGA
[ENA]
¢þ
>WENV182810976
OJXH01000034
[OJXH] human gut metagenome; human gut
43818
43743
-
Asn
GTT
[ENA]
¢þ
>WENV182810975
OJXH01000034
[OJXH] human gut metagenome; human gut
45576
45651
+
Asn
GTT
[ENA]
¢þ
>WENV182810983
OJXH01000037
[OJXH] human gut metagenome; human gut
47524
47438
-
Leu
CAG
[ENA]
¢þ
>WENV182810982
OJXH01000037
[OJXH] human gut metagenome; human gut
47642
47556
-
Leu
CAG
[ENA]
¢þ
>WENV182810949
OJXH01000020
[OJXH] human gut metagenome; human gut
51271
51365
+
SeC
TCA
[ENA]
¢þ
>WENV182810952
OJXH01000025
[OJXH] human gut metagenome; human gut
53362
53436
+
Arg
CCT
[ENA]
¢þ
>WENV182810944
OJXH01000013
[OJXH] human gut metagenome; human gut
53613
53688
+
Ile2
CAT
[ENA]
¢þ
>WENV182810934
OJXH01000008
[OJXH] human gut metagenome; human gut
54956
55043
+
Ser
TGA
[ENA]
¢þ
>WENV182810936
OJXH01000010
[OJXH] human gut metagenome; human gut
58271
58346
+
Asp
GTC
[ENA]
¢þ
>WENV182810937
OJXH01000010
[OJXH] human gut metagenome; human gut
58368
58443
+
Phe
GAA
[ENA]
¢þ
>WENV182810938
OJXH01000010
[OJXH] human gut metagenome; human gut
58456
58541
+
Leu
GAG
[ENA]
¢þ
>WENV182810985
OJXH01000043
[OJXH] human gut metagenome; human gut
58675
58751
+
Met
CAT
[ENA]
¢þ
>WENV182810986
OJXH01000043
[OJXH] human gut metagenome; human gut
58760
58844
+
Leu
TAG
[ENA]
¢þ
>WENV182810987
OJXH01000043
[OJXH] human gut metagenome; human gut
58868
58942
+
Gln
TTG
[ENA]
¢þ
>WENV182810984
OJXH01000039
[OJXH] human gut metagenome; human gut
60937
61013
+
Pro
CGG
[ENA]
¢þ
>WENV182810981
OJXH01000036
[OJXH] human gut metagenome; human gut
65731
65823
+
Ser
GCT
[ENA]
¢þ
>WENV182810958
OJXH01000026
[OJXH] human gut metagenome; human gut
67964
68040
+
Pro
GGG
[ENA]
¢þ
>WENV182810957
OJXH01000025
[OJXH] human gut metagenome; human gut
73834
73759
-
Ala
GGC
[ENA]
¢þ
>WENV182810960
OJXH01000028
[OJXH] human gut metagenome; human gut
74966
74891
-
Trp
CCA
[ENA]
¢þ
>WENV182810953
OJXH01000025
[OJXH] human gut metagenome; human gut
76533
76608
+
Val
TAC
[ENA]
¢þ
>WENV182810954
OJXH01000025
[OJXH] human gut metagenome; human gut
76655
76730
+
Val
TAC
[ENA]
¢þ
>WENV182810955
OJXH01000025
[OJXH] human gut metagenome; human gut
76777
76852
+
Val
TAC
[ENA]
¢þ
>WENV182810956
OJXH01000025
[OJXH] human gut metagenome; human gut
76857
76932
+
Lys
TTT
[ENA]
¢þ
>WENV182810948
OJXH01000018
[OJXH] human gut metagenome; human gut
91494
91569
+
Thr
CGT
[ENA]
¢þ
>WENV182810942
OJXH01000010
[OJXH] human gut metagenome; human gut
92848
92758
-
Ser
CGA
[ENA]
¢þ
>WENV182810928
OJXH01000002
[OJXH] human gut metagenome; human gut
92966
92878
-
Leu
TAA
[ENA]
¢þ
>WENV182810927
OJXH01000002
[OJXH] human gut metagenome; human gut
93055
92981
-
Cys
GCA
[ENA]
¢þ
>WENV182810926
OJXH01000002
[OJXH] human gut metagenome; human gut
93139
93065
-
Gly
GCC
[ENA]
¢þ
>WENV182810925
OJXH01000002
[OJXH] human gut metagenome; human gut
93222
93147
-
Phe
GAA
[ENA]
¢þ
>WENV182810924
OJXH01000002
[OJXH] human gut metagenome; human gut
93303
93228
-
Asp
GTC
[ENA]
¢þ
>WENV182810933
OJXH01000006
[OJXH] human gut metagenome; human gut
94884
94794
-
Ser
GCT
[ENA]
¢þ
>WENV182810945
OJXH01000016
[OJXH] human gut metagenome; human gut
94947
95022
+
His
GTG
[ENA]
¢þ
>WENV182810946
OJXH01000016
[OJXH] human gut metagenome; human gut
95047
95121
+
Gln
TTG
[ENA]
¢þ
>WENV182810947
OJXH01000016
[OJXH] human gut metagenome; human gut
95126
95201
+
Lys
TTT
[ENA]
¢þ
>WENV182810935
OJXH01000008
[OJXH] human gut metagenome; human gut
98339
98252
-
Ser
GGA
[ENA]
¢þ
>WENV182810939
OJXH01000010
[OJXH] human gut metagenome; human gut
113969
114045
+
Pro
TGG
[ENA]
¢þ
>WENV182810940
OJXH01000010
[OJXH] human gut metagenome; human gut
114056
114129
+
Gly
TCC
[ENA]
¢þ
>WENV182810941
OJXH01000010
[OJXH] human gut metagenome; human gut
114235
114311
+
Arg
TCT
[ENA]
¢þ
>WENV182810922
OJXH01000001
[OJXH] human gut metagenome; human gut
116279
116196
-
Leu
CAA
[ENA]
¢þ
>WENV182810930
OJXH01000004
[OJXH] human gut metagenome; human gut
177637
177561
-
fMet
CAT
[ENA]
¢þ
>WENV182810921
OJXH01000001
[OJXH] human gut metagenome; human gut
272382
272308
-
Ile2
CAT
[ENA]
¢þ
>WENV182810923
OJXH01000002
[OJXH] human gut metagenome; human gut
328488
328561
+
Gly
CCC
[ENA]
¢þ
>WENV182810920
OJXH01000001
[OJXH] human gut metagenome; human gut
385031
384956
-
Lys
CTT
[ENA]
¢þ
>WENV182810919
OJXH01000001
[OJXH] human gut metagenome; human gut
422710
422636
-
Arg
CCG
[ENA]
¢þ
>WENV182810918
OJXH01000001
[OJXH] human gut metagenome; human gut
481573
481489
-
Leu
TAG
[ENA]
¢þ
>WENV182810917
OJXH01000001
[OJXH] human gut metagenome; human gut
513695
513606
-
Ser
TGA
[ENA]
¢þ
>WENV182810916
OJXH01000001
[OJXH] human gut metagenome; human gut
528495
528419
-
Arg
ACG
[ENA]
¢þ
>WENV182810915
OJXH01000001
[OJXH] human gut metagenome; human gut
528683
528608
-
Trp
CCA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK