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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OJXY] human gut metagenome; human gut
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182813054
OJXY01003846
[OJXY] human gut metagenome; human gut
172
96
-
Arg
TCT
[ENA]
¢þ
>WENV182813047
OJXY01001310
[OJXY] human gut metagenome; human gut
192
116
-
Arg
ACG
[ENA]
¢þ
>WENV182813036
OJXY01001212
[OJXY] human gut metagenome; human gut
239
316
+
Phe
GAA
[ENA]
¢þ
>WENV182813053
OJXY01003846
[OJXY] human gut metagenome; human gut
252
178
-
Asn
GTT
[ENA]
¢þ
>WENV182813056
OJXY01005039
[OJXY] human gut metagenome; human gut
253
325
+
Arg
CCT
[ENA]
¢þ
>WENV182813057
OJXY01005159
[OJXY] human gut metagenome; human gut
258
183
-
Phe
GAA
[ENA]
¢þ
>WENV182813046
OJXY01001310
[OJXY] human gut metagenome; human gut
289
197
-
Ser
GCT
[ENA]
¢þ
>WENV182813037
OJXY01001212
[OJXY] human gut metagenome; human gut
327
397
+
Gly
TCC
[ENA]
¢þ
>WENV182813034
OJXY01000769
[OJXY] human gut metagenome; human gut
337
423
+
Leu
GAG
[ENA]
¢þ
>WENV182813038
OJXY01001212
[OJXY] human gut metagenome; human gut
406
481
+
Ile
GAT
[ENA]
¢þ
>WENV182813055
OJXY01003995
[OJXY] human gut metagenome; human gut
429
345
-
Leu
CAA
[ENA]
¢þ
>WENV182813050
OJXY01002217
[OJXY] human gut metagenome; human gut
460
549
+
Ser
CGA
[ENA]
¢þ
>WENV182813033
OJXY01000669
[OJXY] human gut metagenome; human gut
489
403
-
Leu
CAG
[ENA]
¢þ
>WENV182813039
OJXY01001212
[OJXY] human gut metagenome; human gut
490
579
+
Ser
GCT
[ENA]
¢þ
>WENV182813048
OJXY01001479
[OJXY] human gut metagenome; human gut
496
402
-
SeC
TCA
[ENA]
¢þ
>WENV182813051
OJXY01002842
[OJXY] human gut metagenome; human gut
503
579
+
Arg
CCG
[ENA]
¢þ
>WENV182813049
OJXY01001533
[OJXY] human gut metagenome; human gut
505
581
+
Arg
TCT
[ENA]
¢þ
>WENV182813040
OJXY01001212
[OJXY] human gut metagenome; human gut
593
666
+
Glu
TTC
[ENA]
¢þ
>WENV182813022
OJXY01000124
[OJXY] human gut metagenome; human gut
615
690
+
Thr
TGT
[ENA]
¢þ
>WENV182813045
OJXY01001249
[OJXY] human gut metagenome; human gut
616
692
+
Pro
GGG
[ENA]
¢þ
>WENV182813052
OJXY01002842
[OJXY] human gut metagenome; human gut
634
709
+
His
GTG
[ENA]
¢þ
>WENV182813032
OJXY01000552
[OJXY] human gut metagenome; human gut
670
594
-
fMet
CAT
[ENA]
¢þ
>WENV182813041
OJXY01001212
[OJXY] human gut metagenome; human gut
692
766
+
Val
TAC
[ENA]
¢þ
>WENV182813029
OJXY01000420
[OJXY] human gut metagenome; human gut
697
621
-
fMet
CAT
[ENA]
¢þ
>WENV182813023
OJXY01000124
[OJXY] human gut metagenome; human gut
701
785
+
Tyr
GTA
[ENA]
¢þ
>WENV182813035
OJXY01000900
[OJXY] human gut metagenome; human gut
768
682
-
Leu
GAG
[ENA]
¢þ
>WENV182813042
OJXY01001212
[OJXY] human gut metagenome; human gut
772
847
+
Lys
TTT
[ENA]
¢þ
>WENV182813043
OJXY01001212
[OJXY] human gut metagenome; human gut
867
950
+
Leu
TAA
[ENA]
¢þ
>WENV182813024
OJXY01000124
[OJXY] human gut metagenome; human gut
901
975
+
Gly
TCC
[ENA]
¢þ
>WENV182813027
OJXY01000266
[OJXY] human gut metagenome; human gut
965
890
-
Gly
GCC
[ENA]
¢þ
>WENV182813044
OJXY01001212
[OJXY] human gut metagenome; human gut
965
1038
+
Arg
ACG
[ENA]
¢þ
>WENV182813025
OJXY01000124
[OJXY] human gut metagenome; human gut
981
1056
+
Thr
GGT
[ENA]
¢þ
>WENV182813030
OJXY01000439
[OJXY] human gut metagenome; human gut
1031
956
-
Lys
TTT
[ENA]
¢þ
>WENV182813031
OJXY01000483
[OJXY] human gut metagenome; human gut
1063
988
-
Asn
GTT
[ENA]
¢þ
>WENV182813028
OJXY01000349
[OJXY] human gut metagenome; human gut
1211
1124
-
Ser
GGA
[ENA]
¢þ
>WENV182813026
OJXY01000189
[OJXY] human gut metagenome; human gut
1329
1405
+
Pro
CGG
[ENA]
¢þ
>WENV182813021
OJXY01000085
[OJXY] human gut metagenome; human gut
2766
2841
+
Asn
GTT
[ENA]
¢þ
>WENV182813020
OJXY01000011
[OJXY] human gut metagenome; human gut
3996
3921
-
Glu
TTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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