This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJYC] human gut metagenome; human gut
HIT:
113 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182813398
OJYC01000421
[OJYC] human gut metagenome; human gut
58
143
+
Leu
CAA
[ENA]
¢þ
>WENV182813345
OJYC01000050
[OJYC] human gut metagenome; human gut
76
151
+
Met
CAT
[ENA]
¢þ
>WENV182813402
OJYC01000718
[OJYC] human gut metagenome; human gut
77
152
+
Ile2
CAT
[ENA]
¢þ
>WENV182813377
OJYC01000179
[OJYC] human gut metagenome; human gut
93
168
+
Asn
GTT
[ENA]
¢þ
>WENV182813397
OJYC01000337
[OJYC] human gut metagenome; human gut
132
58
-
Gly
TCC
[ENA]
¢þ
>WENV182813403
OJYC01000718
[OJYC] human gut metagenome; human gut
163
252
+
Ser
TGA
[ENA]
¢þ
>WENV182813346
OJYC01000050
[OJYC] human gut metagenome; human gut
170
245
+
Ile2
CAT
[ENA]
¢þ
>WENV182813356
OJYC01000054
[OJYC] human gut metagenome; human gut
171
85
-
Leu
CAG
[ENA]
¢þ
>WENV182813358
OJYC01000057
[OJYC] human gut metagenome; human gut
241
167
-
Lys
CTT
[ENA]
¢þ
>WENV182813404
OJYC01000718
[OJYC] human gut metagenome; human gut
264
337
+
fMet
CAT
[ENA]
¢þ
>WENV182813347
OJYC01000050
[OJYC] human gut metagenome; human gut
278
367
+
Ser
TGA
[ENA]
¢þ
>WENV182813396
OJYC01000337
[OJYC] human gut metagenome; human gut
332
248
-
Tyr
GTA
[ENA]
¢þ
>WENV182813405
OJYC01000718
[OJYC] human gut metagenome; human gut
340
414
+
Phe
GAA
[ENA]
¢þ
>WENV182813390
OJYC01000278
[OJYC] human gut metagenome; human gut
347
272
-
Lys
CTT
[ENA]
¢þ
>WENV182813348
OJYC01000050
[OJYC] human gut metagenome; human gut
400
475
+
fMet
CAT
[ENA]
¢þ
>WENV182813395
OJYC01000337
[OJYC] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¢þ
>WENV182813406
OJYC01000718
[OJYC] human gut metagenome; human gut
430
512
+
Tyr
GTA
[ENA]
¢þ
>WENV182813349
OJYC01000050
[OJYC] human gut metagenome; human gut
513
589
+
Asp
GTC
[ENA]
¢þ
>WENV182813407
OJYC01000718
[OJYC] human gut metagenome; human gut
520
591
+
Gln
TTG
[ENA]
¢þ
>WENV182813359
OJYC01000085
[OJYC] human gut metagenome; human gut
553
627
+
Val
TAC
[ENA]
¢þ
>WENV182813399
OJYC01000610
[OJYC] human gut metagenome; human gut
579
506
-
Arg
TCT
[ENA]
¢þ
>WENV182813350
OJYC01000050
[OJYC] human gut metagenome; human gut
591
661
+
Gly
TCC
[ENA]
¢þ
>WENV182813379
OJYC01000211
[OJYC] human gut metagenome; human gut
624
698
+
Val
TAC
[ENA]
¢þ
>WENV182813360
OJYC01000085
[OJYC] human gut metagenome; human gut
632
706
+
Lys
TTT
[ENA]
¢þ
>WENV182813389
OJYC01000270
[OJYC] human gut metagenome; human gut
642
717
+
Lys
CTT
[ENA]
¢þ
>WENV182813351
OJYC01000050
[OJYC] human gut metagenome; human gut
670
745
+
Ile
GAT
[ENA]
¢þ
>WENV182813380
OJYC01000211
[OJYC] human gut metagenome; human gut
700
772
+
Asp
GTC
[ENA]
¢þ
>WENV182813401
OJYC01000685
[OJYC] human gut metagenome; human gut
708
634
-
Ala
TGC
[ENA]
¢þ
>WENV182813361
OJYC01000085
[OJYC] human gut metagenome; human gut
721
804
+
Leu
TAG
[ENA]
¢þ
>WENV182813352
OJYC01000050
[OJYC] human gut metagenome; human gut
754
843
+
Ser
GCT
[ENA]
¢þ
>WENV182813381
OJYC01000211
[OJYC] human gut metagenome; human gut
797
869
+
Lys
TTT
[ENA]
¢þ
>WENV182813362
OJYC01000085
[OJYC] human gut metagenome; human gut
810
885
+
Thr
TGT
[ENA]
¢þ
>WENV182813400
OJYC01000645
[OJYC] human gut metagenome; human gut
847
920
+
Arg
CCG
[ENA]
¢þ
>WENV182813353
OJYC01000050
[OJYC] human gut metagenome; human gut
857
930
+
Glu
TTC
[ENA]
¢þ
>WENV182813382
OJYC01000211
[OJYC] human gut metagenome; human gut
874
957
+
Leu
TAG
[ENA]
¢þ
>WENV182813363
OJYC01000085
[OJYC] human gut metagenome; human gut
890
961
+
Gly
GCC
[ENA]
¢þ
>WENV182813383
OJYC01000211
[OJYC] human gut metagenome; human gut
969
1041
+
Thr
TGT
[ENA]
¢þ
>WENV182813364
OJYC01000085
[OJYC] human gut metagenome; human gut
977
1062
+
Leu
TAA
[ENA]
¢þ
>WENV182813394
OJYC01000320
[OJYC] human gut metagenome; human gut
981
896
-
Leu
AAG
[ENA]
¢þ
>WENV182813392
OJYC01000294
[OJYC] human gut metagenome; human gut
986
1058
+
Thr
GGT
[ENA]
¢þ
>WENV182813384
OJYC01000211
[OJYC] human gut metagenome; human gut
1069
1140
+
Gly
GCC
[ENA]
¢þ
>WENV182813365
OJYC01000085
[OJYC] human gut metagenome; human gut
1077
1150
+
Arg
ACG
[ENA]
¢þ
>WENV182813385
OJYC01000211
[OJYC] human gut metagenome; human gut
1148
1233
+
Leu
TAA
[ENA]
¢þ
>WENV182813366
OJYC01000085
[OJYC] human gut metagenome; human gut
1162
1235
+
Pro
TGG
[ENA]
¢þ
>WENV182813386
OJYC01000211
[OJYC] human gut metagenome; human gut
1245
1318
+
Arg
ACG
[ENA]
¢þ
>WENV182813387
OJYC01000211
[OJYC] human gut metagenome; human gut
1334
1407
+
Pro
TGG
[ENA]
¢þ
>WENV182813341
OJYC01000042
[OJYC] human gut metagenome; human gut
3758
3683
-
Arg
TCT
[ENA]
¢þ
>WENV182813393
OJYC01000309
[OJYC] human gut metagenome; human gut
4229
4300
+
Arg
CCT
[ENA]
¢þ
>WENV182813391
OJYC01000282
[OJYC] human gut metagenome; human gut
4834
4905
+
Glu
TTC
[ENA]
¢þ
>WENV182813388
OJYC01000216
[OJYC] human gut metagenome; human gut
6080
6151
+
Trp
CCA
[ENA]
¢þ
>WENV182813357
OJYC01000056
[OJYC] human gut metagenome; human gut
7754
7826
+
Thr
GGT
[ENA]
¢þ
>WENV182813378
OJYC01000186
[OJYC] human gut metagenome; human gut
8946
8874
-
Cys
GCA
[ENA]
¢þ
>WENV182813371
OJYC01000127
[OJYC] human gut metagenome; human gut
9006
9088
+
Tyr
GTA
[ENA]
¢þ
>WENV182813372
OJYC01000127
[OJYC] human gut metagenome; human gut
9092
9165
+
Trp
CCA
[ENA]
¢þ
>WENV182813373
OJYC01000127
[OJYC] human gut metagenome; human gut
9202
9275
+
His
GTG
[ENA]
¢þ
>WENV182813374
OJYC01000127
[OJYC] human gut metagenome; human gut
9288
9361
+
Gln
TTG
[ENA]
¢þ
>WENV182813376
OJYC01000174
[OJYC] human gut metagenome; human gut
9399
9471
+
Thr
CGT
[ENA]
¢þ
>WENV182813375
OJYC01000128
[OJYC] human gut metagenome; human gut
13400
13311
-
Ser
CGA
[ENA]
¢þ
>WENV182813370
OJYC01000111
[OJYC] human gut metagenome; human gut
18260
18175
-
Leu
CAA
[ENA]
¢þ
>WENV182813369
OJYC01000111
[OJYC] human gut metagenome; human gut
18343
18273
-
Cys
GCA
[ENA]
¢þ
>WENV182813368
OJYC01000094
[OJYC] human gut metagenome; human gut
18591
18665
+
Gly
TCC
[ENA]
¢þ
>WENV182813367
OJYC01000089
[OJYC] human gut metagenome; human gut
21699
21624
-
Arg
CCT
[ENA]
¢þ
>WENV182813355
OJYC01000053
[OJYC] human gut metagenome; human gut
33152
33079
-
Arg
CCG
[ENA]
¢þ
>WENV182813327
OJYC01000022
[OJYC] human gut metagenome; human gut
33414
33339
-
Ile2
CAT
[ENA]
¢þ
>WENV182813342
OJYC01000044
[OJYC] human gut metagenome; human gut
36993
37064
+
Trp
CCA
[ENA]
¢þ
>WENV182813310
OJYC01000007
[OJYC] human gut metagenome; human gut
37092
36998
-
SeC
TCA
[ENA]
¢þ
>WENV182813354
OJYC01000051
[OJYC] human gut metagenome; human gut
39682
39757
+
Phe
GAA
[ENA]
¢þ
>WENV182813344
OJYC01000049
[OJYC] human gut metagenome; human gut
40513
40427
-
Leu
CAG
[ENA]
¢þ
>WENV182813343
OJYC01000046
[OJYC] human gut metagenome; human gut
43204
43288
+
Leu
CAA
[ENA]
¢þ
>WENV182813332
OJYC01000029
[OJYC] human gut metagenome; human gut
47895
47819
-
Pro
TGG
[ENA]
¢þ
>WENV182813331
OJYC01000029
[OJYC] human gut metagenome; human gut
48024
47938
-
Leu
CAG
[ENA]
¢þ
>WENV182813330
OJYC01000029
[OJYC] human gut metagenome; human gut
48123
48048
-
His
GTG
[ENA]
¢þ
>WENV182813329
OJYC01000029
[OJYC] human gut metagenome; human gut
48255
48179
-
Arg
CCG
[ENA]
¢þ
>WENV182813321
OJYC01000012
[OJYC] human gut metagenome; human gut
48514
48439
-
Asn
GTT
[ENA]
¢þ
>WENV182813314
OJYC01000012
[OJYC] human gut metagenome; human gut
50271
50346
+
Asn
GTT
[ENA]
¢þ
>WENV182813313
OJYC01000009
[OJYC] human gut metagenome; human gut
55918
55994
+
Arg
TCT
[ENA]
¢þ
>WENV182813320
OJYC01000012
[OJYC] human gut metagenome; human gut
59174
59099
-
Asn
GTT
[ENA]
¢þ
>WENV182813322
OJYC01000015
[OJYC] human gut metagenome; human gut
60918
60993
+
Thr
CGT
[ENA]
¢þ
>WENV182813334
OJYC01000036
[OJYC] human gut metagenome; human gut
61456
61532
+
Met
CAT
[ENA]
¢þ
>WENV182813335
OJYC01000036
[OJYC] human gut metagenome; human gut
61542
61626
+
Leu
TAG
[ENA]
¢þ
>WENV182813336
OJYC01000036
[OJYC] human gut metagenome; human gut
61650
61724
+
Gln
TTG
[ENA]
¢þ
>WENV182813337
OJYC01000036
[OJYC] human gut metagenome; human gut
61761
61835
+
Gln
TTG
[ENA]
¢þ
>WENV182813338
OJYC01000036
[OJYC] human gut metagenome; human gut
61859
61935
+
Met
CAT
[ENA]
¢þ
>WENV182813339
OJYC01000036
[OJYC] human gut metagenome; human gut
61983
62057
+
Gln
CTG
[ENA]
¢þ
>WENV182813340
OJYC01000036
[OJYC] human gut metagenome; human gut
62134
62208
+
Gln
CTG
[ENA]
¢þ
>WENV182813308
OJYC01000005
[OJYC] human gut metagenome; human gut
62527
62440
-
Ser
TGA
[ENA]
¢þ
>WENV182813319
OJYC01000012
[OJYC] human gut metagenome; human gut
62664
62589
-
Asn
GTT
[ENA]
¢þ
>WENV182813315
OJYC01000012
[OJYC] human gut metagenome; human gut
63656
63745
+
Ser
CGA
[ENA]
¢þ
>WENV182813333
OJYC01000032
[OJYC] human gut metagenome; human gut
65468
65554
+
Leu
GAG
[ENA]
¢þ
>WENV182813311
OJYC01000008
[OJYC] human gut metagenome; human gut
75022
75108
+
Leu
GAG
[ENA]
¢þ
>WENV182813312
OJYC01000008
[OJYC] human gut metagenome; human gut
79055
79131
+
fMet
CAT
[ENA]
¢þ
>WENV182813328
OJYC01000029
[OJYC] human gut metagenome; human gut
83531
83456
-
Trp
CCA
[ENA]
¢þ
>WENV182813316
OJYC01000012
[OJYC] human gut metagenome; human gut
84846
84921
+
Gly
GCC
[ENA]
¢þ
>WENV182813317
OJYC01000012
[OJYC] human gut metagenome; human gut
84962
85035
+
Cys
GCA
[ENA]
¢þ
>WENV182813318
OJYC01000012
[OJYC] human gut metagenome; human gut
85049
85135
+
Leu
TAA
[ENA]
¢þ
>WENV182813298
OJYC01000003
[OJYC] human gut metagenome; human gut
87720
87793
+
Gly
CCC
[ENA]
¢þ
>WENV182813296
OJYC01000001
[OJYC] human gut metagenome; human gut
105367
105291
-
Val
GAC
[ENA]
¢þ
>WENV182813295
OJYC01000001
[OJYC] human gut metagenome; human gut
105448
105372
-
Val
GAC
[ENA]
¢þ
>WENV182813325
OJYC01000020
[OJYC] human gut metagenome; human gut
113153
113237
+
Tyr
GTA
[ENA]
¢þ
>WENV182813326
OJYC01000020
[OJYC] human gut metagenome; human gut
113276
113360
+
Tyr
GTA
[ENA]
¢þ
>WENV182813324
OJYC01000015
[OJYC] human gut metagenome; human gut
114962
114886
-
Asp
GTC
[ENA]
¢þ
>WENV182813323
OJYC01000015
[OJYC] human gut metagenome; human gut
124401
124325
-
Asp
GTC
[ENA]
¢þ
>WENV182813309
OJYC01000007
[OJYC] human gut metagenome; human gut
163648
163724
+
Pro
CGG
[ENA]
¢þ
>WENV182813304
OJYC01000004
[OJYC] human gut metagenome; human gut
188252
188328
+
Pro
GGG
[ENA]
¢þ
>WENV182813303
OJYC01000003
[OJYC] human gut metagenome; human gut
225586
225510
-
fMet
CAT
[ENA]
¢þ
>WENV182813302
OJYC01000003
[OJYC] human gut metagenome; human gut
225696
225620
-
fMet
CAT
[ENA]
¢þ
>WENV182813301
OJYC01000003
[OJYC] human gut metagenome; human gut
225806
225730
-
fMet
CAT
[ENA]
¢þ
>WENV182813305
OJYC01000004
[OJYC] human gut metagenome; human gut
310263
310337
+
Arg
CCT
[ENA]
¢þ
>WENV182813307
OJYC01000004
[OJYC] human gut metagenome; human gut
332303
332228
-
Ala
GGC
[ENA]
¢þ
>WENV182813306
OJYC01000004
[OJYC] human gut metagenome; human gut
332420
332345
-
Ala
GGC
[ENA]
¢þ
>WENV182813297
OJYC01000002
[OJYC] human gut metagenome; human gut
376683
376770
+
Ser
GGA
[ENA]
¢þ
>WENV182813299
OJYC01000003
[OJYC] human gut metagenome; human gut
377499
377591
+
Ser
GCT
[ENA]
¢þ
>WENV182813300
OJYC01000003
[OJYC] human gut metagenome; human gut
377596
377672
+
Arg
ACG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK