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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJYF] human gut metagenome; human gut
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182813693
OJYF01003082
[OJYF] human gut metagenome; human gut
7
82
+
Asp
GTC
[ENA]
¢þ
>WENV182813692
OJYF01002911
[OJYF] human gut metagenome; human gut
12
97
+
Leu
CAG
[ENA]
¢þ
>WENV182813651
OJYF01000101
[OJYF] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182813619
OJYF01000030
[OJYF] human gut metagenome; human gut
77
1
-
Met
CAT
[ENA]
¢þ
>WENV182813679
OJYF01001070
[OJYF] human gut metagenome; human gut
85
9
-
Ile
GAT
[ENA]
¢þ
>WENV182813694
OJYF01003082
[OJYF] human gut metagenome; human gut
86
163
+
Phe
GAA
[ENA]
¢þ
>WENV182813669
OJYF01000382
[OJYF] human gut metagenome; human gut
94
168
+
Arg
CCT
[ENA]
¢þ
>WENV182813712
OJYF01005520
[OJYF] human gut metagenome; human gut
97
171
+
Leu
TAA
[ENA]
¢þ
>WENV182813674
OJYF01000803
[OJYF] human gut metagenome; human gut
108
22
-
Ser
CGA
[ENA]
¢þ
>WENV182813708
OJYF01004029
[OJYF] human gut metagenome; human gut
116
43
-
Glu
TTC
[ENA]
¢þ
>WENV182813614
OJYF01000028
[OJYF] human gut metagenome; human gut
117
193
+
Arg
ACG
[ENA]
¢þ
>WENV182813707
OJYF01003963
[OJYF] human gut metagenome; human gut
134
58
-
Arg
TCT
[ENA]
¢þ
>WENV182813677
OJYF01001061
[OJYF] human gut metagenome; human gut
136
61
-
Lys
CTT
[ENA]
¢þ
>WENV182813688
OJYF01001714
[OJYF] human gut metagenome; human gut
146
61
-
Leu
TAA
[ENA]
¢þ
>WENV182813710
OJYF01005298
[OJYF] human gut metagenome; human gut
146
221
+
Arg
CCT
[ENA]
¢þ
>WENV182813618
OJYF01000030
[OJYF] human gut metagenome; human gut
167
93
-
Gln
TTG
[ENA]
¢þ
>WENV182813695
OJYF01003082
[OJYF] human gut metagenome; human gut
174
244
+
Gly
TCC
[ENA]
¢þ
>WENV182813706
OJYF01003963
[OJYF] human gut metagenome; human gut
218
145
-
Gly
TCC
[ENA]
¢þ
>WENV182813709
OJYF01005118
[OJYF] human gut metagenome; human gut
219
148
-
Arg
CCG
[ENA]
¢þ
>WENV182813687
OJYF01001714
[OJYF] human gut metagenome; human gut
224
153
-
Gly
GCC
[ENA]
¢þ
>WENV182813660
OJYF01000201
[OJYF] human gut metagenome; human gut
246
173
-
Trp
CCA
[ENA]
¢þ
>WENV182813617
OJYF01000030
[OJYF] human gut metagenome; human gut
276
202
-
Gln
TTG
[ENA]
¢þ
>WENV182813705
OJYF01003963
[OJYF] human gut metagenome; human gut
299
225
-
Gly
GCC
[ENA]
¢þ
>WENV182813686
OJYF01001714
[OJYF] human gut metagenome; human gut
303
231
-
Thr
TGT
[ENA]
¢þ
>WENV182813661
OJYF01000215
[OJYF] human gut metagenome; human gut
314
388
+
Asp
GTC
[ENA]
¢þ
>WENV182813689
OJYF01001774
[OJYF] human gut metagenome; human gut
355
281
-
Ile2
CAT
[ENA]
¢þ
>WENV182813696
OJYF01003082
[OJYF] human gut metagenome; human gut
365
438
+
Glu
TTC
[ENA]
¢þ
>WENV182813700
OJYF01003912
[OJYF] human gut metagenome; human gut
366
452
+
Leu
GAG
[ENA]
¢þ
>WENV182813659
OJYF01000159
[OJYF] human gut metagenome; human gut
380
305
-
Thr
GGT
[ENA]
¢þ
>WENV182813616
OJYF01000030
[OJYF] human gut metagenome; human gut
384
300
-
Leu
TAG
[ENA]
¢þ
>WENV182813711
OJYF01005365
[OJYF] human gut metagenome; human gut
385
469
+
Leu
CAA
[ENA]
¢þ
>WENV182813704
OJYF01003963
[OJYF] human gut metagenome; human gut
386
303
-
Leu
TAG
[ENA]
¢þ
>WENV182813685
OJYF01001714
[OJYF] human gut metagenome; human gut
399
316
-
Leu
TAG
[ENA]
¢þ
>WENV182813699
OJYF01003522
[OJYF] human gut metagenome; human gut
430
504
+
Ala
GGC
[ENA]
¢þ
>WENV182813678
OJYF01001065
[OJYF] human gut metagenome; human gut
442
369
-
Arg
CCG
[ENA]
¢þ
>WENV182813662
OJYF01000215
[OJYF] human gut metagenome; human gut
448
525
+
Phe
GAA
[ENA]
¢þ
>WENV182813697
OJYF01003082
[OJYF] human gut metagenome; human gut
450
539
+
Ser
TGA
[ENA]
¢þ
>WENV182813681
OJYF01001625
[OJYF] human gut metagenome; human gut
457
540
+
Leu
CAG
[ENA]
¢þ
>WENV182813658
OJYF01000159
[OJYF] human gut metagenome; human gut
461
387
-
Gly
TCC
[ENA]
¢þ
>WENV182813703
OJYF01003963
[OJYF] human gut metagenome; human gut
467
392
-
Lys
TTT
[ENA]
¢þ
>WENV182813680
OJYF01001307
[OJYF] human gut metagenome; human gut
469
543
+
Val
GAC
[ENA]
¢þ
>WENV182813615
OJYF01000030
[OJYF] human gut metagenome; human gut
471
395
-
Met
CAT
[ENA]
¢þ
>WENV182813684
OJYF01001714
[OJYF] human gut metagenome; human gut
476
404
-
Lys
TTT
[ENA]
¢þ
>WENV182813702
OJYF01003963
[OJYF] human gut metagenome; human gut
545
471
-
Gln
TTG
[ENA]
¢þ
>WENV182813683
OJYF01001714
[OJYF] human gut metagenome; human gut
568
496
-
Asp
GTC
[ENA]
¢þ
>WENV182813698
OJYF01003082
[OJYF] human gut metagenome; human gut
572
647
+
fMet
CAT
[ENA]
¢þ
>WENV182813701
OJYF01003963
[OJYF] human gut metagenome; human gut
626
551
-
His
GTG
[ENA]
¢þ
>WENV182813682
OJYF01001714
[OJYF] human gut metagenome; human gut
643
571
-
Val
TAC
[ENA]
¢þ
>WENV182813657
OJYF01000159
[OJYF] human gut metagenome; human gut
662
578
-
Tyr
GTA
[ENA]
¢þ
>WENV182813656
OJYF01000159
[OJYF] human gut metagenome; human gut
746
671
-
Thr
TGT
[ENA]
¢þ
>WENV182813665
OJYF01000282
[OJYF] human gut metagenome; human gut
796
713
-
Leu
TAG
[ENA]
¢þ
>WENV182813691
OJYF01002068
[OJYF] human gut metagenome; human gut
840
765
-
Ile2
CAT
[ENA]
¢þ
>WENV182813690
OJYF01001903
[OJYF] human gut metagenome; human gut
843
914
+
Gln
CTG
[ENA]
¢þ
>WENV182813650
OJYF01000099
[OJYF] human gut metagenome; human gut
1039
966
-
Pro
TGG
[ENA]
¢þ
>WENV182813672
OJYF01000650
[OJYF] human gut metagenome; human gut
1039
968
-
Gly
CCC
[ENA]
¢þ
>WENV182813675
OJYF01000989
[OJYF] human gut metagenome; human gut
1057
1130
+
Thr
GGT
[ENA]
¢þ
>WENV182813649
OJYF01000099
[OJYF] human gut metagenome; human gut
1124
1051
-
Arg
ACG
[ENA]
¢þ
>WENV182813668
OJYF01000366
[OJYF] human gut metagenome; human gut
1151
1066
-
Ser
GGA
[ENA]
¢þ
>WENV182813676
OJYF01000989
[OJYF] human gut metagenome; human gut
1193
1267
+
Met
CAT
[ENA]
¢þ
>WENV182813648
OJYF01000099
[OJYF] human gut metagenome; human gut
1224
1139
-
Leu
TAA
[ENA]
¢þ
>WENV182813647
OJYF01000099
[OJYF] human gut metagenome; human gut
1311
1240
-
Gly
GCC
[ENA]
¢þ
>WENV182813673
OJYF01000755
[OJYF] human gut metagenome; human gut
1325
1250
-
Thr
CGT
[ENA]
¢þ
>WENV182813670
OJYF01000394
[OJYF] human gut metagenome; human gut
1385
1310
-
Val
TAC
[ENA]
¢þ
>WENV182813646
OJYF01000099
[OJYF] human gut metagenome; human gut
1391
1316
-
Thr
TGT
[ENA]
¢þ
>WENV182813671
OJYF01000420
[OJYF] human gut metagenome; human gut
1435
1509
+
Pro
TGG
[ENA]
¢þ
>WENV182813645
OJYF01000099
[OJYF] human gut metagenome; human gut
1480
1397
-
Leu
TAG
[ENA]
¢þ
>WENV182813644
OJYF01000099
[OJYF] human gut metagenome; human gut
1569
1495
-
Lys
TTT
[ENA]
¢þ
>WENV182813630
OJYF01000053
[OJYF] human gut metagenome; human gut
1585
1499
-
Leu
TAA
[ENA]
¢þ
>WENV182813643
OJYF01000099
[OJYF] human gut metagenome; human gut
1648
1574
-
Val
TAC
[ENA]
¢þ
>WENV182813629
OJYF01000053
[OJYF] human gut metagenome; human gut
1671
1598
-
Cys
GCA
[ENA]
¢þ
>WENV182813666
OJYF01000289
[OJYF] human gut metagenome; human gut
1751
1837
+
Leu
GAG
[ENA]
¢þ
>WENV182813628
OJYF01000053
[OJYF] human gut metagenome; human gut
1800
1725
-
Gly
GCC
[ENA]
¢þ
>WENV182813667
OJYF01000296
[OJYF] human gut metagenome; human gut
2022
2097
+
Arg
TCT
[ENA]
¢þ
>WENV182813622
OJYF01000042
[OJYF] human gut metagenome; human gut
2136
2049
-
Ser
GGA
[ENA]
¢þ
>WENV182813663
OJYF01000229
[OJYF] human gut metagenome; human gut
2356
2271
-
Ser
TGA
[ENA]
¢þ
>WENV182813664
OJYF01000266
[OJYF] human gut metagenome; human gut
2584
2509
-
Glu
TTC
[ENA]
¢þ
>WENV182813613
OJYF01000021
[OJYF] human gut metagenome; human gut
3031
2944
-
Ser
GGA
[ENA]
¢þ
>WENV182813626
OJYF01000049
[OJYF] human gut metagenome; human gut
5137
5048
-
Ser
CGA
[ENA]
¢þ
>WENV182813639
OJYF01000083
[OJYF] human gut metagenome; human gut
5196
5120
-
Arg
TCT
[ENA]
¢þ
>WENV182813625
OJYF01000049
[OJYF] human gut metagenome; human gut
6129
6204
+
Asn
GTT
[ENA]
¢þ
>WENV182813642
OJYF01000099
[OJYF] human gut metagenome; human gut
6796
6720
-
Ile2
CAT
[ENA]
¢þ
>WENV182813641
OJYF01000099
[OJYF] human gut metagenome; human gut
6896
6808
-
Leu
TAA
[ENA]
¢þ
>WENV182813655
OJYF01000103
[OJYF] human gut metagenome; human gut
7409
7334
-
Ala
GGC
[ENA]
¢þ
>WENV182813654
OJYF01000103
[OJYF] human gut metagenome; human gut
7524
7449
-
Ala
GGC
[ENA]
¢þ
>WENV182813640
OJYF01000098
[OJYF] human gut metagenome; human gut
8203
8279
+
Asp
GTC
[ENA]
¢þ
>WENV182813653
OJYF01000102
[OJYF] human gut metagenome; human gut
10353
10279
-
Gln
CTG
[ENA]
¢þ
>WENV182813638
OJYF01000080
[OJYF] human gut metagenome; human gut
10408
10333
-
Phe
GAA
[ENA]
¢þ
>WENV182813652
OJYF01000102
[OJYF] human gut metagenome; human gut
10465
10391
-
Gln
CTG
[ENA]
¢þ
>WENV182813606
OJYF01000014
[OJYF] human gut metagenome; human gut
10685
10611
-
Arg
CCT
[ENA]
¢þ
>WENV182813621
OJYF01000036
[OJYF] human gut metagenome; human gut
10691
10618
-
Gly
CCC
[ENA]
¢þ
>WENV182813610
OJYF01000018
[OJYF] human gut metagenome; human gut
10887
10962
+
Gly
GCC
[ENA]
¢þ
>WENV182813611
OJYF01000018
[OJYF] human gut metagenome; human gut
10998
11073
+
Gly
GCC
[ENA]
¢þ
>WENV182813612
OJYF01000018
[OJYF] human gut metagenome; human gut
11109
11184
+
Gly
GCC
[ENA]
¢þ
>WENV182813620
OJYF01000031
[OJYF] human gut metagenome; human gut
12281
12356
+
Phe
GAA
[ENA]
¢þ
>WENV182813637
OJYF01000076
[OJYF] human gut metagenome; human gut
14095
14020
-
Thr
CGT
[ENA]
¢þ
>WENV182813634
OJYF01000060
[OJYF] human gut metagenome; human gut
14517
14601
+
Leu
CAA
[ENA]
¢þ
>WENV182813633
OJYF01000058
[OJYF] human gut metagenome; human gut
15889
15814
-
Asn
GTT
[ENA]
¢þ
>WENV182813631
OJYF01000058
[OJYF] human gut metagenome; human gut
17638
17713
+
Asn
GTT
[ENA]
¢þ
>WENV182813624
OJYF01000044
[OJYF] human gut metagenome; human gut
18996
18920
-
fMet
CAT
[ENA]
¢þ
>WENV182813632
OJYF01000058
[OJYF] human gut metagenome; human gut
20047
20122
+
Asn
GTT
[ENA]
¢þ
>WENV182813623
OJYF01000044
[OJYF] human gut metagenome; human gut
22863
22777
-
Leu
GAG
[ENA]
¢þ
>WENV182813635
OJYF01000071
[OJYF] human gut metagenome; human gut
23071
23163
+
Ser
GCT
[ENA]
¢þ
>WENV182813636
OJYF01000071
[OJYF] human gut metagenome; human gut
23167
23243
+
Arg
ACG
[ENA]
¢þ
>WENV182813627
OJYF01000051
[OJYF] human gut metagenome; human gut
27185
27110
-
Ile2
CAT
[ENA]
¢þ
>WENV182813607
OJYF01000016
[OJYF] human gut metagenome; human gut
33325
33401
+
Val
GAC
[ENA]
¢þ
>WENV182813608
OJYF01000016
[OJYF] human gut metagenome; human gut
33406
33482
+
Val
GAC
[ENA]
¢þ
>WENV182813600
OJYF01000008
[OJYF] human gut metagenome; human gut
41589
41513
-
Pro
CGG
[ENA]
¢þ
>WENV182813596
OJYF01000001
[OJYF] human gut metagenome; human gut
48589
48665
+
Arg
TCT
[ENA]
¢þ
>WENV182813605
OJYF01000013
[OJYF] human gut metagenome; human gut
52197
52284
+
Ser
TGA
[ENA]
¢þ
>WENV182813609
OJYF01000017
[OJYF] human gut metagenome; human gut
61848
61924
+
Pro
GGG
[ENA]
¢þ
>WENV182813604
OJYF01000009
[OJYF] human gut metagenome; human gut
77984
77908
-
Pro
TGG
[ENA]
¢þ
>WENV182813603
OJYF01000009
[OJYF] human gut metagenome; human gut
78113
78027
-
Leu
CAG
[ENA]
¢þ
>WENV182813602
OJYF01000009
[OJYF] human gut metagenome; human gut
78209
78134
-
His
GTG
[ENA]
¢þ
>WENV182813601
OJYF01000009
[OJYF] human gut metagenome; human gut
78344
78268
-
Arg
CCG
[ENA]
¢þ
>WENV182813599
OJYF01000005
[OJYF] human gut metagenome; human gut
84709
84615
-
SeC
TCA
[ENA]
¢þ
>WENV182813597
OJYF01000004
[OJYF] human gut metagenome; human gut
131793
131877
+
Tyr
GTA
[ENA]
¢þ
>WENV182813598
OJYF01000004
[OJYF] human gut metagenome; human gut
131911
131995
+
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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