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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJZB] human gut metagenome; human gut
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182816578
OJZB01000415
[OJZB] human gut metagenome; human gut
8
83
+
Ala
TGC
[ENA]
¢þ
>WENV182816597
OJZB01001699
[OJZB] human gut metagenome; human gut
59
132
+
Gly
TCC
[ENA]
¢þ
>WENV182816571
OJZB01000352
[OJZB] human gut metagenome; human gut
61
136
+
Lys
CTT
[ENA]
¢þ
>WENV182816558
OJZB01000077
[OJZB] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¢þ
>WENV182816596
OJZB01001559
[OJZB] human gut metagenome; human gut
80
155
+
fMet
CAT
[ENA]
¢þ
>WENV182816559
OJZB01000077
[OJZB] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¢þ
>WENV182816600
OJZB01002242
[OJZB] human gut metagenome; human gut
369
454
+
Leu
GAG
[ENA]
¢þ
>WENV182816598
OJZB01001716
[OJZB] human gut metagenome; human gut
530
458
-
Arg
CCG
[ENA]
¢þ
>WENV182816512
OJZB01000006
[OJZB] human gut metagenome; human gut
553
627
+
Val
TAC
[ENA]
¢þ
>WENV182816601
OJZB01002278
[OJZB] human gut metagenome; human gut
621
696
+
Glu
TTC
[ENA]
¢þ
>WENV182816513
OJZB01000006
[OJZB] human gut metagenome; human gut
632
706
+
Lys
TTT
[ENA]
¢þ
>WENV182816514
OJZB01000006
[OJZB] human gut metagenome; human gut
721
804
+
Leu
TAG
[ENA]
¢þ
>WENV182816593
OJZB01001224
[OJZB] human gut metagenome; human gut
757
846
+
Ser
GGA
[ENA]
¢þ
>WENV182816515
OJZB01000006
[OJZB] human gut metagenome; human gut
810
885
+
Thr
TGT
[ENA]
¢þ
>WENV182816516
OJZB01000006
[OJZB] human gut metagenome; human gut
890
961
+
Gly
GCC
[ENA]
¢þ
>WENV182816599
OJZB01001791
[OJZB] human gut metagenome; human gut
948
874
-
Gly
GCC
[ENA]
¢þ
>WENV182816517
OJZB01000006
[OJZB] human gut metagenome; human gut
977
1062
+
Leu
TAA
[ENA]
¢þ
>WENV182816595
OJZB01001511
[OJZB] human gut metagenome; human gut
1017
943
-
Cys
GCA
[ENA]
¢þ
>WENV182816518
OJZB01000006
[OJZB] human gut metagenome; human gut
1077
1150
+
Arg
ACG
[ENA]
¢þ
>WENV182816594
OJZB01001511
[OJZB] human gut metagenome; human gut
1098
1023
-
Phe
GAA
[ENA]
¢þ
>WENV182816519
OJZB01000006
[OJZB] human gut metagenome; human gut
1162
1235
+
Pro
TGG
[ENA]
¢þ
>WENV182816588
OJZB01001049
[OJZB] human gut metagenome; human gut
1172
1258
+
Leu
TAA
[ENA]
¢þ
>WENV182816520
OJZB01000006
[OJZB] human gut metagenome; human gut
1248
1322
+
Ala
TGC
[ENA]
¢þ
>WENV182816587
OJZB01000914
[OJZB] human gut metagenome; human gut
1259
1185
-
Cys
GCA
[ENA]
¢þ
>WENV182816589
OJZB01001049
[OJZB] human gut metagenome; human gut
1281
1356
+
fMet
CAT
[ENA]
¢þ
>WENV182816521
OJZB01000006
[OJZB] human gut metagenome; human gut
1344
1419
+
Met
CAT
[ENA]
¢þ
>WENV182816590
OJZB01001049
[OJZB] human gut metagenome; human gut
1363
1439
+
Met
CAT
[ENA]
¢þ
>WENV182816522
OJZB01000006
[OJZB] human gut metagenome; human gut
1438
1513
+
Ile2
CAT
[ENA]
¢þ
>WENV182816591
OJZB01001049
[OJZB] human gut metagenome; human gut
1445
1531
+
Leu
TAA
[ENA]
¢þ
>WENV182816523
OJZB01000006
[OJZB] human gut metagenome; human gut
1546
1635
+
Ser
TGA
[ENA]
¢þ
>WENV182816592
OJZB01001049
[OJZB] human gut metagenome; human gut
1554
1629
+
fMet
CAT
[ENA]
¢þ
>WENV182816524
OJZB01000006
[OJZB] human gut metagenome; human gut
1668
1743
+
fMet
CAT
[ENA]
¢þ
>WENV182816525
OJZB01000006
[OJZB] human gut metagenome; human gut
1781
1857
+
Asp
GTC
[ENA]
¢þ
>WENV182816580
OJZB01000450
[OJZB] human gut metagenome; human gut
1822
1912
+
Ser
TGA
[ENA]
¢þ
>WENV182816526
OJZB01000006
[OJZB] human gut metagenome; human gut
1859
1929
+
Gly
TCC
[ENA]
¢þ
>WENV182816581
OJZB01000450
[OJZB] human gut metagenome; human gut
1936
2026
+
Ser
GCT
[ENA]
¢þ
>WENV182816527
OJZB01000006
[OJZB] human gut metagenome; human gut
1938
2013
+
Ile
GAT
[ENA]
¢þ
>WENV182816528
OJZB01000006
[OJZB] human gut metagenome; human gut
2026
2099
+
Glu
TTC
[ENA]
¢þ
>WENV182816529
OJZB01000006
[OJZB] human gut metagenome; human gut
2111
2200
+
Ser
TGA
[ENA]
¢þ
>WENV182816530
OJZB01000006
[OJZB] human gut metagenome; human gut
2233
2308
+
fMet
CAT
[ENA]
¢þ
>WENV182816569
OJZB01000234
[OJZB] human gut metagenome; human gut
2289
2214
-
Ala
TGC
[ENA]
¢þ
>WENV182816531
OJZB01000006
[OJZB] human gut metagenome; human gut
2355
2430
+
Asp
GTC
[ENA]
¢þ
>WENV182816568
OJZB01000234
[OJZB] human gut metagenome; human gut
2371
2295
-
Ile2
CAT
[ENA]
¢þ
>WENV182816532
OJZB01000006
[OJZB] human gut metagenome; human gut
2434
2511
+
Phe
GAA
[ENA]
¢þ
>WENV182816533
OJZB01000006
[OJZB] human gut metagenome; human gut
2522
2592
+
Gly
TCC
[ENA]
¢þ
>WENV182816577
OJZB01000414
[OJZB] human gut metagenome; human gut
2558
2484
-
Gly
GCC
[ENA]
¢þ
>WENV182816534
OJZB01000006
[OJZB] human gut metagenome; human gut
2601
2676
+
Ile
GAT
[ENA]
¢þ
>WENV182816576
OJZB01000414
[OJZB] human gut metagenome; human gut
2669
2586
-
Leu
TAG
[ENA]
¢þ
>WENV182816535
OJZB01000006
[OJZB] human gut metagenome; human gut
2685
2774
+
Ser
GCT
[ENA]
¢þ
>WENV182816575
OJZB01000414
[OJZB] human gut metagenome; human gut
2753
2678
-
Lys
TTT
[ENA]
¢þ
>WENV182816536
OJZB01000006
[OJZB] human gut metagenome; human gut
2788
2861
+
Glu
TTC
[ENA]
¢þ
>WENV182816574
OJZB01000414
[OJZB] human gut metagenome; human gut
2832
2758
-
Gln
TTG
[ENA]
¢þ
>WENV182816573
OJZB01000414
[OJZB] human gut metagenome; human gut
2913
2838
-
His
GTG
[ENA]
¢þ
>WENV182816586
OJZB01000455
[OJZB] human gut metagenome; human gut
2949
2865
-
Tyr
GTA
[ENA]
¢þ
>WENV182816572
OJZB01000414
[OJZB] human gut metagenome; human gut
2996
2920
-
Arg
TCT
[ENA]
¢þ
>WENV182816585
OJZB01000455
[OJZB] human gut metagenome; human gut
3032
2958
-
Thr
TGT
[ENA]
¢þ
>WENV182816545
OJZB01000027
[OJZB] human gut metagenome; human gut
3132
3042
-
Ser
GCT
[ENA]
¢þ
>WENV182816584
OJZB01000455
[OJZB] human gut metagenome; human gut
3137
3061
-
Asp
GTC
[ENA]
¢þ
>WENV182816544
OJZB01000027
[OJZB] human gut metagenome; human gut
3209
3135
-
Asn
GTT
[ENA]
¢þ
>WENV182816583
OJZB01000455
[OJZB] human gut metagenome; human gut
3220
3145
-
Val
TAC
[ENA]
¢þ
>WENV182816582
OJZB01000455
[OJZB] human gut metagenome; human gut
3298
3224
-
Glu
TTC
[ENA]
¢þ
>WENV182816579
OJZB01000415
[OJZB] human gut metagenome; human gut
3382
3457
+
Thr
GGT
[ENA]
¢þ
>WENV182816560
OJZB01000079
[OJZB] human gut metagenome; human gut
3634
3559
-
Ile2
CAT
[ENA]
¢þ
>WENV182816570
OJZB01000328
[OJZB] human gut metagenome; human gut
3647
3730
+
Leu
CAA
[ENA]
¢þ
>WENV182816547
OJZB01000029
[OJZB] human gut metagenome; human gut
4307
4217
-
Ser
GGA
[ENA]
¢þ
>WENV182816541
OJZB01000013
[OJZB] human gut metagenome; human gut
4417
4490
+
Ile2
CAT
[ENA]
¢þ
>WENV182816546
OJZB01000029
[OJZB] human gut metagenome; human gut
4430
4359
-
Glu
TTC
[ENA]
¢þ
>WENV182816543
OJZB01000024
[OJZB] human gut metagenome; human gut
8094
8169
+
Thr
GGT
[ENA]
¢þ
>WENV182816561
OJZB01000100
[OJZB] human gut metagenome; human gut
10207
10280
+
fMet
CAT
[ENA]
¢þ
>WENV182816562
OJZB01000100
[OJZB] human gut metagenome; human gut
10290
10365
+
Asp
GTC
[ENA]
¢þ
>WENV182816563
OJZB01000100
[OJZB] human gut metagenome; human gut
10375
10449
+
Phe
GAA
[ENA]
¢þ
>WENV182816564
OJZB01000100
[OJZB] human gut metagenome; human gut
10462
10535
+
His
GTG
[ENA]
¢þ
>WENV182816565
OJZB01000100
[OJZB] human gut metagenome; human gut
10546
10617
+
Gln
TTG
[ENA]
¢þ
>WENV182816566
OJZB01000100
[OJZB] human gut metagenome; human gut
10623
10696
+
Cys
GCA
[ENA]
¢þ
>WENV182816567
OJZB01000100
[OJZB] human gut metagenome; human gut
10821
10904
+
Leu
CAA
[ENA]
¢þ
>WENV182816539
OJZB01000010
[OJZB] human gut metagenome; human gut
12296
12207
-
Ser
CGA
[ENA]
¢þ
>WENV182816556
OJZB01000038
[OJZB] human gut metagenome; human gut
13624
13550
-
Arg
TCT
[ENA]
¢þ
>WENV182816540
OJZB01000011
[OJZB] human gut metagenome; human gut
14240
14168
-
Thr
GGT
[ENA]
¢þ
>WENV182816542
OJZB01000014
[OJZB] human gut metagenome; human gut
17142
17071
-
Trp
CCA
[ENA]
¢þ
>WENV182816548
OJZB01000031
[OJZB] human gut metagenome; human gut
25230
25158
-
Thr
CGT
[ENA]
¢þ
>WENV182816557
OJZB01000039
[OJZB] human gut metagenome; human gut
32852
32781
-
Arg
CCG
[ENA]
¢þ
>WENV182816555
OJZB01000037
[OJZB] human gut metagenome; human gut
34128
34220
+
Ser
TGA
[ENA]
¢þ
>WENV182816549
OJZB01000032
[OJZB] human gut metagenome; human gut
39217
39292
+
Val
TAC
[ENA]
¢þ
>WENV182816550
OJZB01000032
[OJZB] human gut metagenome; human gut
39299
39374
+
Thr
TGT
[ENA]
¢þ
>WENV182816551
OJZB01000032
[OJZB] human gut metagenome; human gut
39380
39454
+
Lys
TTT
[ENA]
¢þ
>WENV182816552
OJZB01000032
[OJZB] human gut metagenome; human gut
39472
39546
+
Gly
GCC
[ENA]
¢þ
>WENV182816553
OJZB01000032
[OJZB] human gut metagenome; human gut
39558
39646
+
Leu
TAA
[ENA]
¢þ
>WENV182816554
OJZB01000032
[OJZB] human gut metagenome; human gut
39659
39735
+
Arg
ACG
[ENA]
¢þ
>WENV182816509
OJZB01000003
[OJZB] human gut metagenome; human gut
58030
58103
+
Arg
CCG
[ENA]
¢þ
>WENV182816538
OJZB01000010
[OJZB] human gut metagenome; human gut
83012
82937
-
Asn
GTT
[ENA]
¢þ
>WENV182816511
OJZB01000004
[OJZB] human gut metagenome; human gut
132180
132105
-
Arg
TCT
[ENA]
¢þ
>WENV182816537
OJZB01000006
[OJZB] human gut metagenome; human gut
157043
157117
+
Lys
CTT
[ENA]
¢þ
>WENV182816510
OJZB01000004
[OJZB] human gut metagenome; human gut
182937
183012
+
Arg
CCT
[ENA]
¢þ
>WENV182816508
OJZB01000001
[OJZB] human gut metagenome; human gut
239790
239717
-
Gln
TTG
[ENA]
¢þ
>WENV182816507
OJZB01000001
[OJZB] human gut metagenome; human gut
239880
239798
-
Tyr
GTA
[ENA]
¢þ
>WENV182816506
OJZB01000001
[OJZB] human gut metagenome; human gut
251213
251127
-
Leu
GAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK