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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJZI] human gut metagenome; human gut
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182817165
OJZI01001233
[OJZI] human gut metagenome; human gut
34
108
+
Asn
GTT
[ENA]
¢þ
>WENV182817135
OJZI01000327
[OJZI] human gut metagenome; human gut
37
120
+
Leu
TAG
[ENA]
¢þ
>WENV182817100
OJZI01000014
[OJZI] human gut metagenome; human gut
58
133
+
Lys
TTT
[ENA]
¢þ
>WENV182817111
OJZI01000029
[OJZI] human gut metagenome; human gut
105
180
+
Trp
CCA
[ENA]
¢þ
>WENV182817107
OJZI01000023
[OJZI] human gut metagenome; human gut
105
181
+
Asp
GTC
[ENA]
¢þ
>WENV182817098
OJZI01000013
[OJZI] human gut metagenome; human gut
116
192
+
Arg
ACG
[ENA]
¢þ
>WENV182817136
OJZI01000327
[OJZI] human gut metagenome; human gut
131
205
+
Gly
GCC
[ENA]
¢þ
>WENV182817130
OJZI01000130
[OJZI] human gut metagenome; human gut
132
58
-
Gly
TCC
[ENA]
¢þ
>WENV182817158
OJZI01000947
[OJZI] human gut metagenome; human gut
148
72
-
Arg
CCT
[ENA]
¢þ
>WENV182817166
OJZI01001233
[OJZI] human gut metagenome; human gut
165
241
+
fMet
CAT
[ENA]
¢þ
>WENV182817137
OJZI01000327
[OJZI] human gut metagenome; human gut
219
295
+
Arg
TCT
[ENA]
¢þ
>WENV182817167
OJZI01001233
[OJZI] human gut metagenome; human gut
269
343
+
Glu
TTC
[ENA]
¢þ
>WENV182817101
OJZI01000014
[OJZI] human gut metagenome; human gut
280
355
+
Lys
TTT
[ENA]
¢þ
>WENV182817099
OJZI01000013
[OJZI] human gut metagenome; human gut
289
365
+
Arg
ACG
[ENA]
¢þ
>WENV182817138
OJZI01000327
[OJZI] human gut metagenome; human gut
303
378
+
Gln
TTG
[ENA]
¢þ
>WENV182817129
OJZI01000130
[OJZI] human gut metagenome; human gut
332
248
-
Tyr
GTA
[ENA]
¢þ
>WENV182817168
OJZI01001233
[OJZI] human gut metagenome; human gut
347
422
+
Val
TAC
[ENA]
¢þ
>WENV182817139
OJZI01000327
[OJZI] human gut metagenome; human gut
391
466
+
Lys
TTT
[ENA]
¢þ
>WENV182817128
OJZI01000130
[OJZI] human gut metagenome; human gut
418
343
-
Thr
TGT
[ENA]
¢þ
>WENV182817172
OJZI01001935
[OJZI] human gut metagenome; human gut
429
357
-
Thr
GGT
[ENA]
¢þ
>WENV182817169
OJZI01001233
[OJZI] human gut metagenome; human gut
455
531
+
Asp
GTC
[ENA]
¢þ
>WENV182817140
OJZI01000327
[OJZI] human gut metagenome; human gut
469
557
+
Ser
TGA
[ENA]
¢þ
>WENV182817102
OJZI01000014
[OJZI] human gut metagenome; human gut
490
565
+
Lys
TTT
[ENA]
¢þ
>WENV182817152
OJZI01000349
[OJZI] human gut metagenome; human gut
510
584
+
Lys
CTT
[ENA]
¢þ
>WENV182817164
OJZI01001111
[OJZI] human gut metagenome; human gut
536
608
+
Thr
CGT
[ENA]
¢þ
>WENV182817153
OJZI01000410
[OJZI] human gut metagenome; human gut
558
629
+
Trp
CCA
[ENA]
¢þ
>WENV182817141
OJZI01000327
[OJZI] human gut metagenome; human gut
567
658
+
Ser
GCT
[ENA]
¢þ
>WENV182817170
OJZI01001233
[OJZI] human gut metagenome; human gut
582
657
+
Thr
TGT
[ENA]
¢þ
>WENV182817160
OJZI01001077
[OJZI] human gut metagenome; human gut
622
710
+
Leu
TAA
[ENA]
¢þ
>WENV182817157
OJZI01000880
[OJZI] human gut metagenome; human gut
661
736
+
Asn
GTT
[ENA]
¢þ
>WENV182817142
OJZI01000327
[OJZI] human gut metagenome; human gut
667
743
+
Pro
TGG
[ENA]
¢þ
>WENV182817161
OJZI01001077
[OJZI] human gut metagenome; human gut
719
794
+
Ile2
CAT
[ENA]
¢þ
>WENV182817171
OJZI01001233
[OJZI] human gut metagenome; human gut
730
815
+
Tyr
GTA
[ENA]
¢þ
>WENV182817154
OJZI01000564
[OJZI] human gut metagenome; human gut
749
678
-
Trp
CCA
[ENA]
¢þ
>WENV182817143
OJZI01000327
[OJZI] human gut metagenome; human gut
749
822
+
Ile
GAT
[ENA]
¢þ
>WENV182817162
OJZI01001077
[OJZI] human gut metagenome; human gut
827
916
+
Ser
TGA
[ENA]
¢þ
>WENV182817144
OJZI01000327
[OJZI] human gut metagenome; human gut
832
921
+
Ser
GCT
[ENA]
¢þ
>WENV182817155
OJZI01000822
[OJZI] human gut metagenome; human gut
868
950
+
Tyr
GTA
[ENA]
¢þ
>WENV182817159
OJZI01000994
[OJZI] human gut metagenome; human gut
904
815
-
Leu
AAG
[ENA]
¢þ
>WENV182817145
OJZI01000327
[OJZI] human gut metagenome; human gut
935
1008
+
Glu
TTC
[ENA]
¢þ
>WENV182817163
OJZI01001077
[OJZI] human gut metagenome; human gut
949
1024
+
fMet
CAT
[ENA]
¢þ
>WENV182817156
OJZI01000822
[OJZI] human gut metagenome; human gut
958
1031
+
Gln
TTG
[ENA]
¢þ
>WENV182817146
OJZI01000327
[OJZI] human gut metagenome; human gut
1034
1108
+
Val
TAC
[ENA]
¢þ
>WENV182817147
OJZI01000327
[OJZI] human gut metagenome; human gut
1113
1187
+
Lys
TTT
[ENA]
¢þ
>WENV182817134
OJZI01000305
[OJZI] human gut metagenome; human gut
1197
1272
+
Arg
TCT
[ENA]
¢þ
>WENV182817148
OJZI01000327
[OJZI] human gut metagenome; human gut
1292
1363
+
Gly
GCC
[ENA]
¢þ
>WENV182817149
OJZI01000327
[OJZI] human gut metagenome; human gut
1379
1464
+
Leu
TAA
[ENA]
¢þ
>WENV182817150
OJZI01000327
[OJZI] human gut metagenome; human gut
1479
1552
+
Arg
ACG
[ENA]
¢þ
>WENV182817151
OJZI01000327
[OJZI] human gut metagenome; human gut
1642
1715
+
Pro
TGG
[ENA]
¢þ
>WENV182817132
OJZI01000184
[OJZI] human gut metagenome; human gut
1891
1964
+
Arg
CCG
[ENA]
¢þ
>WENV182817122
OJZI01000034
[OJZI] human gut metagenome; human gut
2033
1959
-
Gln
CTG
[ENA]
¢þ
>WENV182817121
OJZI01000034
[OJZI] human gut metagenome; human gut
2184
2110
-
Gln
CTG
[ENA]
¢þ
>WENV182817131
OJZI01000139
[OJZI] human gut metagenome; human gut
2205
2133
-
Ala
TGC
[ENA]
¢þ
>WENV182817120
OJZI01000034
[OJZI] human gut metagenome; human gut
2308
2232
-
Met
CAT
[ENA]
¢þ
>WENV182817133
OJZI01000237
[OJZI] human gut metagenome; human gut
2405
2330
-
Arg
CCT
[ENA]
¢þ
>WENV182817119
OJZI01000034
[OJZI] human gut metagenome; human gut
2406
2332
-
Gln
TTG
[ENA]
¢þ
>WENV182817118
OJZI01000034
[OJZI] human gut metagenome; human gut
2517
2443
-
Gln
TTG
[ENA]
¢þ
>WENV182817117
OJZI01000034
[OJZI] human gut metagenome; human gut
2625
2541
-
Leu
TAG
[ENA]
¢þ
>WENV182817116
OJZI01000034
[OJZI] human gut metagenome; human gut
2711
2635
-
Met
CAT
[ENA]
¢þ
>WENV182817127
OJZI01000090
[OJZI] human gut metagenome; human gut
3789
3862
+
Lys
CTT
[ENA]
¢þ
>WENV182817110
OJZI01000027
[OJZI] human gut metagenome; human gut
4729
4645
-
Leu
CAA
[ENA]
¢þ
>WENV182817108
OJZI01000023
[OJZI] human gut metagenome; human gut
9544
9620
+
Asp
GTC
[ENA]
¢þ
>WENV182817126
OJZI01000052
[OJZI] human gut metagenome; human gut
10705
10781
+
Pro
CGG
[ENA]
¢þ
>WENV182817123
OJZI01000043
[OJZI] human gut metagenome; human gut
18591
18665
+
Gly
TCC
[ENA]
¢þ
>WENV182817124
OJZI01000046
[OJZI] human gut metagenome; human gut
19827
19919
+
Ser
GCT
[ENA]
¢þ
>WENV182817125
OJZI01000046
[OJZI] human gut metagenome; human gut
19924
20000
+
Arg
ACG
[ENA]
¢þ
>WENV182817106
OJZI01000021
[OJZI] human gut metagenome; human gut
23131
23218
+
Ser
TGA
[ENA]
¢þ
>WENV182817112
OJZI01000029
[OJZI] human gut metagenome; human gut
35381
35457
+
Arg
CCG
[ENA]
¢þ
>WENV182817113
OJZI01000029
[OJZI] human gut metagenome; human gut
35513
35588
+
His
GTG
[ENA]
¢þ
>WENV182817114
OJZI01000029
[OJZI] human gut metagenome; human gut
35612
35698
+
Leu
CAG
[ENA]
¢þ
>WENV182817115
OJZI01000029
[OJZI] human gut metagenome; human gut
35741
35817
+
Pro
TGG
[ENA]
¢þ
>WENV182817095
OJZI01000009
[OJZI] human gut metagenome; human gut
37092
36998
-
SeC
TCA
[ENA]
¢þ
>WENV182817103
OJZI01000015
[OJZI] human gut metagenome; human gut
39658
39733
+
Gly
GCC
[ENA]
¢þ
>WENV182817104
OJZI01000015
[OJZI] human gut metagenome; human gut
39806
39881
+
Gly
GCC
[ENA]
¢þ
>WENV182817105
OJZI01000015
[OJZI] human gut metagenome; human gut
39954
40029
+
Gly
GCC
[ENA]
¢þ
>WENV182817088
OJZI01000006
[OJZI] human gut metagenome; human gut
52806
52882
+
Val
GAC
[ENA]
¢þ
>WENV182817089
OJZI01000006
[OJZI] human gut metagenome; human gut
52887
52963
+
Val
GAC
[ENA]
¢þ
>WENV182817090
OJZI01000006
[OJZI] human gut metagenome; human gut
52968
53044
+
Val
GAC
[ENA]
¢þ
>WENV182817097
OJZI01000010
[OJZI] human gut metagenome; human gut
53322
53246
-
fMet
CAT
[ENA]
¢þ
>WENV182817096
OJZI01000010
[OJZI] human gut metagenome; human gut
57355
57269
-
Leu
GAG
[ENA]
¢þ
>WENV182817109
OJZI01000023
[OJZI] human gut metagenome; human gut
63588
63513
-
Thr
CGT
[ENA]
¢þ
>WENV182817093
OJZI01000008
[OJZI] human gut metagenome; human gut
66700
66775
+
Phe
GAA
[ENA]
¢þ
>WENV182817084
OJZI01000004
[OJZI] human gut metagenome; human gut
131725
131801
+
fMet
CAT
[ENA]
¢þ
>WENV182817085
OJZI01000004
[OJZI] human gut metagenome; human gut
131835
131911
+
fMet
CAT
[ENA]
¢þ
>WENV182817086
OJZI01000004
[OJZI] human gut metagenome; human gut
131945
132021
+
fMet
CAT
[ENA]
¢þ
>WENV182817094
OJZI01000008
[OJZI] human gut metagenome; human gut
133012
133087
+
Ile2
CAT
[ENA]
¢þ
>WENV182817091
OJZI01000007
[OJZI] human gut metagenome; human gut
186157
186244
+
Ser
GGA
[ENA]
¢þ
>WENV182817092
OJZI01000007
[OJZI] human gut metagenome; human gut
189238
189325
+
Ser
GGA
[ENA]
¢þ
>WENV182817080
OJZI01000001
[OJZI] human gut metagenome; human gut
207699
207613
-
Leu
TAA
[ENA]
¢þ
>WENV182817079
OJZI01000001
[OJZI] human gut metagenome; human gut
207786
207713
-
Cys
GCA
[ENA]
¢þ
>WENV182817078
OJZI01000001
[OJZI] human gut metagenome; human gut
207902
207827
-
Gly
GCC
[ENA]
¢þ
>WENV182817077
OJZI01000001
[OJZI] human gut metagenome; human gut
229092
229003
-
Ser
CGA
[ENA]
¢þ
>WENV182817081
OJZI01000002
[OJZI] human gut metagenome; human gut
229574
229650
+
Arg
TCT
[ENA]
¢þ
>WENV182817069
OJZI01000001
[OJZI] human gut metagenome; human gut
230084
230159
+
Asn
GTT
[ENA]
¢þ
>WENV182817070
OJZI01000001
[OJZI] human gut metagenome; human gut
233574
233649
+
Asn
GTT
[ENA]
¢þ
>WENV182817076
OJZI01000001
[OJZI] human gut metagenome; human gut
242477
242402
-
Asn
GTT
[ENA]
¢þ
>WENV182817071
OJZI01000001
[OJZI] human gut metagenome; human gut
244234
244309
+
Asn
GTT
[ENA]
¢þ
>WENV182817087
OJZI01000004
[OJZI] human gut metagenome; human gut
269811
269738
-
Gly
CCC
[ENA]
¢þ
>WENV182817082
OJZI01000003
[OJZI] human gut metagenome; human gut
280792
280878
+
Leu
CAG
[ENA]
¢þ
>WENV182817083
OJZI01000003
[OJZI] human gut metagenome; human gut
280909
280995
+
Leu
CAG
[ENA]
¢þ
>WENV182817072
OJZI01000001
[OJZI] human gut metagenome; human gut
481035
481111
+
Pro
GGG
[ENA]
¢þ
>WENV182817073
OJZI01000001
[OJZI] human gut metagenome; human gut
603046
603120
+
Arg
CCT
[ENA]
¢þ
>WENV182817075
OJZI01000001
[OJZI] human gut metagenome; human gut
625086
625011
-
Ala
GGC
[ENA]
¢þ
>WENV182817074
OJZI01000001
[OJZI] human gut metagenome; human gut
625203
625128
-
Ala
GGC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK