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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OJZO] human gut metagenome; human gut
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182818150
OJZO01000486
[OJZO] human gut metagenome; human gut
19
94
+
Phe
GAA
[ENA]
¢þ
>WENV182818151
OJZO01000505
[OJZO] human gut metagenome; human gut
75
3
-
Asn
GTT
[ENA]
¢þ
>WENV182818144
OJZO01000218
[OJZO] human gut metagenome; human gut
380
305
-
Thr
GGT
[ENA]
¢þ
>WENV182818143
OJZO01000218
[OJZO] human gut metagenome; human gut
461
387
-
Gly
TCC
[ENA]
¢þ
>WENV182818145
OJZO01000326
[OJZO] human gut metagenome; human gut
553
628
+
Ile2
CAT
[ENA]
¢þ
>WENV182818149
OJZO01000348
[OJZO] human gut metagenome; human gut
554
482
-
Ala
TGC
[ENA]
¢þ
>WENV182818146
OJZO01000326
[OJZO] human gut metagenome; human gut
636
712
+
Arg
TCG
[ENA]
¢þ
>WENV182818142
OJZO01000218
[OJZO] human gut metagenome; human gut
662
578
-
Tyr
GTA
[ENA]
¢þ
>WENV182818147
OJZO01000326
[OJZO] human gut metagenome; human gut
726
802
+
Arg
TCT
[ENA]
¢þ
>WENV182818141
OJZO01000218
[OJZO] human gut metagenome; human gut
746
671
-
Thr
TGT
[ENA]
¢þ
>WENV182818077
OJZO01000008
[OJZO] human gut metagenome; human gut
829
753
-
Arg
TCT
[ENA]
¢þ
>WENV182818148
OJZO01000327
[OJZO] human gut metagenome; human gut
1373
1298
-
Ile2
CAT
[ENA]
¢þ
>WENV182818064
OJZO01000002
[OJZO] human gut metagenome; human gut
2341
2267
-
Arg
CCT
[ENA]
¢þ
>WENV182818093
OJZO01000027
[OJZO] human gut metagenome; human gut
2754
2829
+
Ala
GGC
[ENA]
¢þ
>WENV182818094
OJZO01000027
[OJZO] human gut metagenome; human gut
2869
2944
+
Ala
GGC
[ENA]
¢þ
>WENV182818059
OJZO01000001
[OJZO] human gut metagenome; human gut
3154
3229
+
Thr
GGT
[ENA]
¢þ
>WENV182818112
OJZO01000050
[OJZO] human gut metagenome; human gut
3221
3145
-
Pro
TGG
[ENA]
¢þ
>WENV182818111
OJZO01000050
[OJZO] human gut metagenome; human gut
3350
3264
-
Leu
CAG
[ENA]
¢þ
>WENV182818102
OJZO01000031
[OJZO] human gut metagenome; human gut
3367
3292
-
Asn
GTT
[ENA]
¢þ
>WENV182818110
OJZO01000050
[OJZO] human gut metagenome; human gut
3446
3371
-
His
GTG
[ENA]
¢þ
>WENV182818109
OJZO01000050
[OJZO] human gut metagenome; human gut
3581
3505
-
Arg
CCG
[ENA]
¢þ
>WENV182818140
OJZO01000207
[OJZO] human gut metagenome; human gut
3933
4006
+
Arg
CCG
[ENA]
¢þ
>WENV182818092
OJZO01000024
[OJZO] human gut metagenome; human gut
3948
3864
-
Leu
CAA
[ENA]
¢þ
>WENV182818139
OJZO01000198
[OJZO] human gut metagenome; human gut
4565
4476
-
Ser
CGA
[ENA]
¢þ
>WENV182818101
OJZO01000031
[OJZO] human gut metagenome; human gut
5776
5701
-
Asn
GTT
[ENA]
¢þ
>WENV182818138
OJZO01000174
[OJZO] human gut metagenome; human gut
7092
7019
-
Glu
TTC
[ENA]
¢þ
>WENV182818137
OJZO01000174
[OJZO] human gut metagenome; human gut
7180
7105
-
Ile
GAT
[ENA]
¢þ
>WENV182818136
OJZO01000174
[OJZO] human gut metagenome; human gut
7259
7189
-
Gly
TCC
[ENA]
¢þ
>WENV182818135
OJZO01000174
[OJZO] human gut metagenome; human gut
7337
7261
-
Asp
GTC
[ENA]
¢þ
>WENV182818134
OJZO01000174
[OJZO] human gut metagenome; human gut
7450
7375
-
fMet
CAT
[ENA]
¢þ
>WENV182818100
OJZO01000031
[OJZO] human gut metagenome; human gut
7525
7600
+
Asn
GTT
[ENA]
¢þ
>WENV182818133
OJZO01000174
[OJZO] human gut metagenome; human gut
7572
7483
-
Ser
TGA
[ENA]
¢þ
>WENV182818115
OJZO01000064
[OJZO] human gut metagenome; human gut
8201
8277
+
Asp
GTC
[ENA]
¢þ
>WENV182818122
OJZO01000107
[OJZO] human gut metagenome; human gut
8536
8451
-
Leu
CAA
[ENA]
¢þ
>WENV182818121
OJZO01000107
[OJZO] human gut metagenome; human gut
8619
8549
-
Cys
GCA
[ENA]
¢þ
>WENV182818120
OJZO01000107
[OJZO] human gut metagenome; human gut
8717
8644
-
Gln
TTG
[ENA]
¢þ
>WENV182818119
OJZO01000107
[OJZO] human gut metagenome; human gut
8803
8730
-
His
GTG
[ENA]
¢þ
>WENV182818118
OJZO01000107
[OJZO] human gut metagenome; human gut
8913
8840
-
Trp
CCA
[ENA]
¢þ
>WENV182818078
OJZO01000009
[OJZO] human gut metagenome; human gut
8979
9066
+
Ser
GGA
[ENA]
¢þ
>WENV182818117
OJZO01000107
[OJZO] human gut metagenome; human gut
8999
8917
-
Tyr
GTA
[ENA]
¢þ
>WENV182818124
OJZO01000113
[OJZO] human gut metagenome; human gut
10879
10804
-
Asn
GTT
[ENA]
¢þ
>WENV182818123
OJZO01000113
[OJZO] human gut metagenome; human gut
11871
11960
+
Ser
CGA
[ENA]
¢þ
>WENV182818132
OJZO01000132
[OJZO] human gut metagenome; human gut
12350
12277
-
Pro
TGG
[ENA]
¢þ
>WENV182818131
OJZO01000132
[OJZO] human gut metagenome; human gut
12435
12362
-
Arg
ACG
[ENA]
¢þ
>WENV182818130
OJZO01000132
[OJZO] human gut metagenome; human gut
12535
12450
-
Leu
TAA
[ENA]
¢þ
>WENV182818129
OJZO01000132
[OJZO] human gut metagenome; human gut
12622
12551
-
Gly
GCC
[ENA]
¢þ
>WENV182818128
OJZO01000132
[OJZO] human gut metagenome; human gut
12702
12627
-
Thr
TGT
[ENA]
¢þ
>WENV182818127
OJZO01000132
[OJZO] human gut metagenome; human gut
12791
12708
-
Leu
TAG
[ENA]
¢þ
>WENV182818126
OJZO01000132
[OJZO] human gut metagenome; human gut
12880
12806
-
Lys
TTT
[ENA]
¢þ
>WENV182818125
OJZO01000132
[OJZO] human gut metagenome; human gut
12959
12885
-
Val
TAC
[ENA]
¢þ
>WENV182818114
OJZO01000059
[OJZO] human gut metagenome; human gut
15504
15432
-
Thr
CGT
[ENA]
¢þ
>WENV182818083
OJZO01000013
[OJZO] human gut metagenome; human gut
19111
19025
-
Leu
CAG
[ENA]
¢þ
>WENV182818082
OJZO01000013
[OJZO] human gut metagenome; human gut
19231
19145
-
Leu
CAG
[ENA]
¢þ
>WENV182818081
OJZO01000013
[OJZO] human gut metagenome; human gut
19346
19260
-
Leu
CAG
[ENA]
¢þ
>WENV182818116
OJZO01000090
[OJZO] human gut metagenome; human gut
20286
20358
+
Thr
GGT
[ENA]
¢þ
>WENV182818099
OJZO01000029
[OJZO] human gut metagenome; human gut
21942
21867
-
Arg
CCT
[ENA]
¢þ
>WENV182818085
OJZO01000016
[OJZO] human gut metagenome; human gut
25931
26015
+
Tyr
GTA
[ENA]
¢þ
>WENV182818105
OJZO01000034
[OJZO] human gut metagenome; human gut
29048
28973
-
Gly
GCC
[ENA]
¢þ
>WENV182818104
OJZO01000034
[OJZO] human gut metagenome; human gut
29159
29084
-
Gly
GCC
[ENA]
¢þ
>WENV182818103
OJZO01000034
[OJZO] human gut metagenome; human gut
29270
29195
-
Gly
GCC
[ENA]
¢þ
>WENV182818097
OJZO01000028
[OJZO] human gut metagenome; human gut
29354
29429
+
Thr
CGT
[ENA]
¢þ
>WENV182818065
OJZO01000003
[OJZO] human gut metagenome; human gut
30994
31070
+
fMet
CAT
[ENA]
¢þ
>WENV182818113
OJZO01000056
[OJZO] human gut metagenome; human gut
33051
32976
-
Asn
GTT
[ENA]
¢þ
>WENV182818067
OJZO01000004
[OJZO] human gut metagenome; human gut
33115
33191
+
Val
GAC
[ENA]
¢þ
>WENV182818068
OJZO01000004
[OJZO] human gut metagenome; human gut
33196
33272
+
Val
GAC
[ENA]
¢þ
>WENV182818108
OJZO01000050
[OJZO] human gut metagenome; human gut
38125
38050
-
Trp
CCA
[ENA]
¢þ
>WENV182818107
OJZO01000050
[OJZO] human gut metagenome; human gut
38210
38134
-
Asp
GTC
[ENA]
¢þ
>WENV182818086
OJZO01000019
[OJZO] human gut metagenome; human gut
54670
54745
+
Gly
GCC
[ENA]
¢þ
>WENV182818087
OJZO01000019
[OJZO] human gut metagenome; human gut
54800
54873
+
Cys
GCA
[ENA]
¢þ
>WENV182818088
OJZO01000019
[OJZO] human gut metagenome; human gut
54886
54972
+
Leu
TAA
[ENA]
¢þ
>WENV182818106
OJZO01000035
[OJZO] human gut metagenome; human gut
56227
56313
+
Leu
GAG
[ENA]
¢þ
>WENV182818095
OJZO01000027
[OJZO] human gut metagenome; human gut
58303
58377
+
Asn
GTT
[ENA]
¢þ
>WENV182818096
OJZO01000027
[OJZO] human gut metagenome; human gut
58383
58458
+
Thr
TGT
[ENA]
¢þ
>WENV182818079
OJZO01000009
[OJZO] human gut metagenome; human gut
60985
61072
+
Ser
TGA
[ENA]
¢þ
>WENV182818098
OJZO01000029
[OJZO] human gut metagenome; human gut
71280
71355
+
Arg
TCT
[ENA]
¢þ
>WENV182818084
OJZO01000014
[OJZO] human gut metagenome; human gut
83031
83107
+
Pro
CGG
[ENA]
¢þ
>WENV182818089
OJZO01000022
[OJZO] human gut metagenome; human gut
93221
93313
+
Ser
GCT
[ENA]
¢þ
>WENV182818090
OJZO01000022
[OJZO] human gut metagenome; human gut
93317
93393
+
Arg
ACG
[ENA]
¢þ
>WENV182818091
OJZO01000022
[OJZO] human gut metagenome; human gut
93457
93533
+
Arg
ACG
[ENA]
¢þ
>WENV182818076
OJZO01000007
[OJZO] human gut metagenome; human gut
100529
100455
-
Gln
CTG
[ENA]
¢þ
>WENV182818075
OJZO01000007
[OJZO] human gut metagenome; human gut
100641
100567
-
Gln
CTG
[ENA]
¢þ
>WENV182818074
OJZO01000007
[OJZO] human gut metagenome; human gut
100766
100690
-
Met
CAT
[ENA]
¢þ
>WENV182818073
OJZO01000007
[OJZO] human gut metagenome; human gut
100856
100782
-
Gln
TTG
[ENA]
¢þ
>WENV182818072
OJZO01000007
[OJZO] human gut metagenome; human gut
100965
100891
-
Gln
TTG
[ENA]
¢þ
>WENV182818071
OJZO01000007
[OJZO] human gut metagenome; human gut
101073
100989
-
Leu
TAG
[ENA]
¢þ
>WENV182818070
OJZO01000007
[OJZO] human gut metagenome; human gut
101160
101084
-
Met
CAT
[ENA]
¢þ
>WENV182818080
OJZO01000010
[OJZO] human gut metagenome; human gut
102379
102285
-
SeC
TCA
[ENA]
¢þ
>WENV182818060
OJZO01000001
[OJZO] human gut metagenome; human gut
102624
102710
+
Leu
GAG
[ENA]
¢þ
>WENV182818061
OJZO01000001
[OJZO] human gut metagenome; human gut
106488
106564
+
fMet
CAT
[ENA]
¢þ
>WENV182818066
OJZO01000003
[OJZO] human gut metagenome; human gut
106861
106788
-
Gly
CCC
[ENA]
¢þ
>WENV182818069
OJZO01000006
[OJZO] human gut metagenome; human gut
150833
150746
-
Ser
GGA
[ENA]
¢þ
>WENV182818063
OJZO01000002
[OJZO] human gut metagenome; human gut
173379
173303
-
Pro
GGG
[ENA]
¢þ
>WENV182818062
OJZO01000001
[OJZO] human gut metagenome; human gut
201218
201143
-
Ile2
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK