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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OKAJ] human gut metagenome; human gut
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182820104
OKAJ01002139
[OKAJ] human gut metagenome; human gut
2
88
+
Leu
GAG
[ENA]
¢þ
>WENV182820109
OKAJ01003371
[OKAJ] human gut metagenome; human gut
21
96
+
fMet
CAT
[ENA]
¢þ
>WENV182820085
OKAJ01000558
[OKAJ] human gut metagenome; human gut
76
152
+
Val
GAC
[ENA]
¢þ
>WENV182820110
OKAJ01003371
[OKAJ] human gut metagenome; human gut
143
218
+
Asp
GTC
[ENA]
¢þ
>WENV182820091
OKAJ01001118
[OKAJ] human gut metagenome; human gut
171
85
-
Leu
CAG
[ENA]
¢þ
>WENV182820095
OKAJ01001129
[OKAJ] human gut metagenome; human gut
189
114
-
Thr
GGT
[ENA]
¢þ
>WENV182820088
OKAJ01000935
[OKAJ] human gut metagenome; human gut
200
275
+
Lys
TTT
[ENA]
¢þ
>WENV182820108
OKAJ01003021
[OKAJ] human gut metagenome; human gut
207
282
+
Thr
CGT
[ENA]
¢þ
>WENV182820111
OKAJ01003371
[OKAJ] human gut metagenome; human gut
222
296
+
Lys
TTT
[ENA]
¢þ
>WENV182820094
OKAJ01001129
[OKAJ] human gut metagenome; human gut
269
195
-
Gly
TCC
[ENA]
¢þ
>WENV182820105
OKAJ01002510
[OKAJ] human gut metagenome; human gut
280
353
+
Gly
CCC
[ENA]
¢þ
>WENV182820112
OKAJ01003371
[OKAJ] human gut metagenome; human gut
300
383
+
Leu
TAG
[ENA]
¢þ
>WENV182820106
OKAJ01002732
[OKAJ] human gut metagenome; human gut
327
401
+
Gly
TCC
[ENA]
¢þ
>WENV182820097
OKAJ01001330
[OKAJ] human gut metagenome; human gut
340
265
-
Phe
GAA
[ENA]
¢þ
>WENV182820113
OKAJ01003371
[OKAJ] human gut metagenome; human gut
395
467
+
Thr
TGT
[ENA]
¢þ
>WENV182820107
OKAJ01002989
[OKAJ] human gut metagenome; human gut
438
364
-
Arg
CCT
[ENA]
¢þ
>WENV182820086
OKAJ01000584
[OKAJ] human gut metagenome; human gut
438
514
+
fMet
CAT
[ENA]
¢þ
>WENV182820087
OKAJ01000753
[OKAJ] human gut metagenome; human gut
458
369
-
Ser
CGA
[ENA]
¢þ
>WENV182820093
OKAJ01001129
[OKAJ] human gut metagenome; human gut
469
385
-
Tyr
GTA
[ENA]
¢þ
>WENV182820103
OKAJ01001925
[OKAJ] human gut metagenome; human gut
513
437
-
Pro
GGG
[ENA]
¢þ
>WENV182820092
OKAJ01001129
[OKAJ] human gut metagenome; human gut
555
480
-
Thr
TGT
[ENA]
¢þ
>WENV182820101
OKAJ01001528
[OKAJ] human gut metagenome; human gut
593
507
-
Leu
TAA
[ENA]
¢þ
>WENV182820089
OKAJ01001015
[OKAJ] human gut metagenome; human gut
663
587
-
Pro
CGG
[ENA]
¢þ
>WENV182820100
OKAJ01001528
[OKAJ] human gut metagenome; human gut
680
607
-
Cys
GCA
[ENA]
¢þ
>WENV182820098
OKAJ01001423
[OKAJ] human gut metagenome; human gut
719
803
+
Leu
CAA
[ENA]
¢þ
>WENV182820096
OKAJ01001147
[OKAJ] human gut metagenome; human gut
722
809
+
Ser
GGA
[ENA]
¢þ
>WENV182820102
OKAJ01001545
[OKAJ] human gut metagenome; human gut
745
821
+
Arg
CCG
[ENA]
¢þ
>WENV182820099
OKAJ01001528
[OKAJ] human gut metagenome; human gut
796
721
-
Gly
GCC
[ENA]
¢þ
>WENV182820090
OKAJ01001099
[OKAJ] human gut metagenome; human gut
924
1018
+
SeC
TCA
[ENA]
¢þ
>WENV182820084
OKAJ01000406
[OKAJ] human gut metagenome; human gut
997
922
-
Asn
GTT
[ENA]
¢þ
>WENV182820080
OKAJ01000045
[OKAJ] human gut metagenome; human gut
1006
930
-
Asp
GTC
[ENA]
¢þ
>WENV182820082
OKAJ01000403
[OKAJ] human gut metagenome; human gut
1230
1322
+
Ser
GCT
[ENA]
¢þ
>WENV182820083
OKAJ01000403
[OKAJ] human gut metagenome; human gut
1327
1403
+
Arg
ACG
[ENA]
¢þ
>WENV182820081
OKAJ01000235
[OKAJ] human gut metagenome; human gut
1407
1331
-
Arg
TCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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