This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKBU] human gut metagenome; human gut
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182823493
OKBU01002758
[OKBU] human gut metagenome; human gut
59
134
+
His
GTG
[ENA]
¢þ
>WENV182823485
OKBU01002194
[OKBU] human gut metagenome; human gut
96
171
+
Ala
GGC
[ENA]
¢þ
>WENV182823492
OKBU01002746
[OKBU] human gut metagenome; human gut
139
69
-
Gly
TCC
[ENA]
¢þ
>WENV182823494
OKBU01002758
[OKBU] human gut metagenome; human gut
140
214
+
Gln
TTG
[ENA]
¢þ
>WENV182823450
OKBU01000119
[OKBU] human gut metagenome; human gut
145
69
-
Arg
CCG
[ENA]
¢þ
>WENV182823484
OKBU01002098
[OKBU] human gut metagenome; human gut
159
70
-
Ser
CGA
[ENA]
¢þ
>WENV182823481
OKBU01001703
[OKBU] human gut metagenome; human gut
190
115
-
Ala
TGC
[ENA]
¢þ
>WENV182823491
OKBU01002746
[OKBU] human gut metagenome; human gut
217
141
-
Asp
GTC
[ENA]
¢þ
>WENV182823495
OKBU01002758
[OKBU] human gut metagenome; human gut
218
293
+
Lys
TTT
[ENA]
¢þ
>WENV182823483
OKBU01002050
[OKBU] human gut metagenome; human gut
253
325
+
Arg
CCT
[ENA]
¢þ
>WENV182823496
OKBU01002758
[OKBU] human gut metagenome; human gut
298
381
+
Leu
TAG
[ENA]
¢þ
>WENV182823490
OKBU01002746
[OKBU] human gut metagenome; human gut
340
265
-
fMet
CAT
[ENA]
¢þ
>WENV182823480
OKBU01001703
[OKBU] human gut metagenome; human gut
373
297
-
Ile
GAT
[ENA]
¢þ
>WENV182823449
OKBU01000098
[OKBU] human gut metagenome; human gut
380
304
-
Pro
CGG
[ENA]
¢þ
>WENV182823497
OKBU01002758
[OKBU] human gut metagenome; human gut
385
459
+
Gly
GCC
[ENA]
¢þ
>WENV182823489
OKBU01002746
[OKBU] human gut metagenome; human gut
462
373
-
Ser
TGA
[ENA]
¢þ
>WENV182823498
OKBU01002758
[OKBU] human gut metagenome; human gut
466
539
+
Gly
TCC
[ENA]
¢þ
>WENV182823487
OKBU01002629
[OKBU] human gut metagenome; human gut
521
596
+
Ala
TGC
[ENA]
¢þ
>WENV182823488
OKBU01002746
[OKBU] human gut metagenome; human gut
547
474
-
Glu
TTC
[ENA]
¢þ
>WENV182823499
OKBU01002758
[OKBU] human gut metagenome; human gut
550
626
+
Arg
TCT
[ENA]
¢þ
>WENV182823486
OKBU01002563
[OKBU] human gut metagenome; human gut
570
495
-
Trp
CCA
[ENA]
¢þ
>WENV182823482
OKBU01001745
[OKBU] human gut metagenome; human gut
870
956
+
Leu
GAG
[ENA]
¢þ
>WENV182823474
OKBU01000655
[OKBU] human gut metagenome; human gut
880
804
-
Asp
GTC
[ENA]
¢þ
>WENV182823479
OKBU01001522
[OKBU] human gut metagenome; human gut
1065
1140
+
Val
TAC
[ENA]
¢þ
>WENV182823478
OKBU01001413
[OKBU] human gut metagenome; human gut
1112
1185
+
Glu
TTC
[ENA]
¢þ
>WENV182823477
OKBU01000910
[OKBU] human gut metagenome; human gut
1330
1403
+
Gly
CCC
[ENA]
¢þ
>WENV182823455
OKBU01000499
[OKBU] human gut metagenome; human gut
1504
1580
+
Met
CAT
[ENA]
¢þ
>WENV182823456
OKBU01000499
[OKBU] human gut metagenome; human gut
1626
1700
+
Gln
CTG
[ENA]
¢þ
>WENV182823476
OKBU01000794
[OKBU] human gut metagenome; human gut
1682
1769
+
Ser
TGA
[ENA]
¢þ
>WENV182823475
OKBU01000742
[OKBU] human gut metagenome; human gut
1702
1778
+
fMet
CAT
[ENA]
¢þ
>WENV182823464
OKBU01000571
[OKBU] human gut metagenome; human gut
2114
2189
+
Asn
GTT
[ENA]
¢þ
>WENV182823473
OKBU01000637
[OKBU] human gut metagenome; human gut
2119
2046
-
Pro
TGG
[ENA]
¢þ
>WENV182823459
OKBU01000523
[OKBU] human gut metagenome; human gut
2193
2117
-
Pro
GGG
[ENA]
¢þ
>WENV182823472
OKBU01000637
[OKBU] human gut metagenome; human gut
2204
2131
-
Arg
ACG
[ENA]
¢þ
>WENV182823454
OKBU01000467
[OKBU] human gut metagenome; human gut
2205
2133
-
Ala
TGC
[ENA]
¢þ
>WENV182823471
OKBU01000637
[OKBU] human gut metagenome; human gut
2304
2219
-
Leu
TAA
[ENA]
¢þ
>WENV182823452
OKBU01000182
[OKBU] human gut metagenome; human gut
2366
2282
-
Tyr
GTA
[ENA]
¢þ
>WENV182823470
OKBU01000637
[OKBU] human gut metagenome; human gut
2391
2320
-
Gly
GCC
[ENA]
¢þ
>WENV182823461
OKBU01000562
[OKBU] human gut metagenome; human gut
2399
2475
+
Val
GAC
[ENA]
¢þ
>WENV182823451
OKBU01000182
[OKBU] human gut metagenome; human gut
2452
2377
-
Thr
TGT
[ENA]
¢þ
>WENV182823469
OKBU01000637
[OKBU] human gut metagenome; human gut
2471
2396
-
Thr
TGT
[ENA]
¢þ
>WENV182823462
OKBU01000562
[OKBU] human gut metagenome; human gut
2480
2556
+
Val
GAC
[ENA]
¢þ
>WENV182823468
OKBU01000637
[OKBU] human gut metagenome; human gut
2560
2477
-
Leu
TAG
[ENA]
¢þ
>WENV182823467
OKBU01000637
[OKBU] human gut metagenome; human gut
2649
2575
-
Lys
TTT
[ENA]
¢þ
>WENV182823448
OKBU01000075
[OKBU] human gut metagenome; human gut
2687
2603
-
Leu
CAA
[ENA]
¢þ
>WENV182823460
OKBU01000537
[OKBU] human gut metagenome; human gut
2710
2785
+
Thr
CGT
[ENA]
¢þ
>WENV182823466
OKBU01000637
[OKBU] human gut metagenome; human gut
2728
2654
-
Val
TAC
[ENA]
¢þ
>WENV182823465
OKBU01000633
[OKBU] human gut metagenome; human gut
2734
2820
+
Leu
CAG
[ENA]
¢þ
>WENV182823457
OKBU01000510
[OKBU] human gut metagenome; human gut
2746
2838
+
Ser
GCT
[ENA]
¢þ
>WENV182823458
OKBU01000510
[OKBU] human gut metagenome; human gut
2843
2919
+
Arg
ACG
[ENA]
¢þ
>WENV182823463
OKBU01000568
[OKBU] human gut metagenome; human gut
3506
3580
+
Glu
TTC
[ENA]
¢þ
>WENV182823453
OKBU01000278
[OKBU] human gut metagenome; human gut
4203
4278
+
Phe
GAA
[ENA]
¢þ
>WENV182823446
OKBU01000038
[OKBU] human gut metagenome; human gut
7166
7241
+
Gly
GCC
[ENA]
¢þ
>WENV182823447
OKBU01000039
[OKBU] human gut metagenome; human gut
9128
9041
-
Ser
GGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK