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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKCB] human gut metagenome; human gut
HIT:
88 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182824167
OKCB01000666
[OKCB] human gut metagenome; human gut
2
76
+
Glu
TTC
[ENA]
¢þ
>WENV182824176
OKCB01000834
[OKCB] human gut metagenome; human gut
58
129
+
Gly
GCC
[ENA]
¢þ
>WENV182824125
OKCB01000020
[OKCB] human gut metagenome; human gut
59
131
+
Val
TAC
[ENA]
¢þ
>WENV182824136
OKCB01000068
[OKCB] human gut metagenome; human gut
63
148
+
Leu
CAA
[ENA]
¢þ
>WENV182824131
OKCB01000027
[OKCB] human gut metagenome; human gut
69
154
+
Leu
GAG
[ENA]
¢þ
>WENV182824168
OKCB01000666
[OKCB] human gut metagenome; human gut
80
155
+
Val
TAC
[ENA]
¢þ
>WENV182824199
OKCB01003781
[OKCB] human gut metagenome; human gut
91
15
-
Arg
TCT
[ENA]
¢þ
>WENV182824166
OKCB01000630
[OKCB] human gut metagenome; human gut
102
176
+
Ala
TGC
[ENA]
¢þ
>WENV182824126
OKCB01000020
[OKCB] human gut metagenome; human gut
134
206
+
Asp
GTC
[ENA]
¢þ
>WENV182824177
OKCB01000834
[OKCB] human gut metagenome; human gut
136
221
+
Leu
TAA
[ENA]
¢þ
>WENV182824194
OKCB01002212
[OKCB] human gut metagenome; human gut
200
288
+
Ser
TGA
[ENA]
¢þ
>WENV182824138
OKCB01000117
[OKCB] human gut metagenome; human gut
210
296
+
Leu
GAG
[ENA]
¢þ
>WENV182824127
OKCB01000020
[OKCB] human gut metagenome; human gut
225
297
+
Lys
TTT
[ENA]
¢þ
>WENV182824178
OKCB01000834
[OKCB] human gut metagenome; human gut
236
309
+
Arg
ACG
[ENA]
¢þ
>WENV182824191
OKCB01001879
[OKCB] human gut metagenome; human gut
268
178
-
Ser
GCT
[ENA]
¢þ
>WENV182824198
OKCB01003781
[OKCB] human gut metagenome; human gut
273
200
-
Gly
TCC
[ENA]
¢þ
>WENV182824128
OKCB01000020
[OKCB] human gut metagenome; human gut
302
385
+
Leu
TAG
[ENA]
¢þ
>WENV182824190
OKCB01001802
[OKCB] human gut metagenome; human gut
311
235
-
Arg
ACG
[ENA]
¢þ
>WENV182824179
OKCB01000834
[OKCB] human gut metagenome; human gut
315
390
+
Pro
TGG
[ENA]
¢þ
>WENV182824197
OKCB01003781
[OKCB] human gut metagenome; human gut
361
285
-
Pro
TGG
[ENA]
¢þ
>WENV182824193
OKCB01002159
[OKCB] human gut metagenome; human gut
372
298
-
Ile2
CAT
[ENA]
¢þ
>WENV182824196
OKCB01003661
[OKCB] human gut metagenome; human gut
393
468
+
Glu
TTC
[ENA]
¢þ
>WENV182824180
OKCB01000834
[OKCB] human gut metagenome; human gut
394
469
+
Met
CAT
[ENA]
¢þ
>WENV182824129
OKCB01000020
[OKCB] human gut metagenome; human gut
399
471
+
Thr
TGT
[ENA]
¢þ
>WENV182824173
OKCB01000700
[OKCB] human gut metagenome; human gut
403
327
-
Met
CAT
[ENA]
¢þ
>WENV182824130
OKCB01000020
[OKCB] human gut metagenome; human gut
478
551
+
Glu
TTC
[ENA]
¢þ
>WENV182824172
OKCB01000700
[OKCB] human gut metagenome; human gut
484
409
-
Thr
GGT
[ENA]
¢þ
>WENV182824181
OKCB01000834
[OKCB] human gut metagenome; human gut
484
559
+
Ile2
CAT
[ENA]
¢þ
>WENV182824189
OKCB01001802
[OKCB] human gut metagenome; human gut
503
428
-
Trp
CCA
[ENA]
¢þ
>WENV182824182
OKCB01000834
[OKCB] human gut metagenome; human gut
578
667
+
Ser
TGA
[ENA]
¢þ
>WENV182824171
OKCB01000700
[OKCB] human gut metagenome; human gut
590
515
-
fMet
CAT
[ENA]
¢þ
>WENV182824195
OKCB01002668
[OKCB] human gut metagenome; human gut
634
724
+
Ser
CGA
[ENA]
¢þ
>WENV182824183
OKCB01000834
[OKCB] human gut metagenome; human gut
677
750
+
fMet
CAT
[ENA]
¢þ
>WENV182824170
OKCB01000700
[OKCB] human gut metagenome; human gut
680
596
-
Tyr
GTA
[ENA]
¢þ
>WENV182824162
OKCB01000486
[OKCB] human gut metagenome; human gut
725
649
-
Arg
CCT
[ENA]
¢þ
>WENV182824184
OKCB01000834
[OKCB] human gut metagenome; human gut
753
827
+
Phe
GAA
[ENA]
¢þ
>WENV182824169
OKCB01000700
[OKCB] human gut metagenome; human gut
766
691
-
Thr
TGT
[ENA]
¢þ
>WENV182824123
OKCB01000016
[OKCB] human gut metagenome; human gut
793
867
+
Asn
GTT
[ENA]
¢þ
>WENV182824192
OKCB01001991
[OKCB] human gut metagenome; human gut
823
899
+
Arg
CCT
[ENA]
¢þ
>WENV182824185
OKCB01000834
[OKCB] human gut metagenome; human gut
835
907
+
Gly
TCC
[ENA]
¢þ
>WENV182824124
OKCB01000016
[OKCB] human gut metagenome; human gut
870
960
+
Ser
GCT
[ENA]
¢þ
>WENV182824186
OKCB01000834
[OKCB] human gut metagenome; human gut
939
1014
+
Ile
GAT
[ENA]
¢þ
>WENV182824137
OKCB01000085
[OKCB] human gut metagenome; human gut
964
891
-
Gly
CCC
[ENA]
¢þ
>WENV182824187
OKCB01000834
[OKCB] human gut metagenome; human gut
1017
1106
+
Ser
GCT
[ENA]
¢þ
>WENV182824188
OKCB01001132
[OKCB] human gut metagenome; human gut
1545
1635
+
Ser
GGA
[ENA]
¢þ
>WENV182824174
OKCB01000702
[OKCB] human gut metagenome; human gut
1548
1632
+
Leu
TAG
[ENA]
¢þ
>WENV182824175
OKCB01000757
[OKCB] human gut metagenome; human gut
1970
2053
+
Leu
CAA
[ENA]
¢þ
>WENV182824163
OKCB01000493
[OKCB] human gut metagenome; human gut
2911
2986
+
His
GTG
[ENA]
¢þ
>WENV182824164
OKCB01000493
[OKCB] human gut metagenome; human gut
3011
3085
+
Gln
TTG
[ENA]
¢þ
>WENV182824165
OKCB01000493
[OKCB] human gut metagenome; human gut
3090
3165
+
Lys
TTT
[ENA]
¢þ
>WENV182824161
OKCB01000432
[OKCB] human gut metagenome; human gut
3447
3522
+
Thr
CGT
[ENA]
¢þ
>WENV182824160
OKCB01000382
[OKCB] human gut metagenome; human gut
3523
3449
-
Arg
CCG
[ENA]
¢þ
>WENV182824155
OKCB01000364
[OKCB] human gut metagenome; human gut
3635
3710
+
Asp
GTC
[ENA]
¢þ
>WENV182824156
OKCB01000364
[OKCB] human gut metagenome; human gut
3716
3791
+
Phe
GAA
[ENA]
¢þ
>WENV182824157
OKCB01000364
[OKCB] human gut metagenome; human gut
3799
3873
+
Gly
GCC
[ENA]
¢þ
>WENV182824158
OKCB01000364
[OKCB] human gut metagenome; human gut
3886
3960
+
Cys
GCA
[ENA]
¢þ
>WENV182824159
OKCB01000364
[OKCB] human gut metagenome; human gut
3977
4065
+
Leu
TAA
[ENA]
¢þ
>WENV182824150
OKCB01000212
[OKCB] human gut metagenome; human gut
4501
4426
-
Ala
TGC
[ENA]
¢þ
>WENV182824149
OKCB01000212
[OKCB] human gut metagenome; human gut
4633
4557
-
Ile
GAT
[ENA]
¢þ
>WENV182824116
OKCB01000005
[OKCB] human gut metagenome; human gut
5229
5145
-
Leu
CAG
[ENA]
¢þ
>WENV182824115
OKCB01000004
[OKCB] human gut metagenome; human gut
5841
5927
+
Ser
GGA
[ENA]
¢þ
>WENV182824140
OKCB01000139
[OKCB] human gut metagenome; human gut
6094
6186
+
Ser
TGA
[ENA]
¢þ
>WENV182824154
OKCB01000240
[OKCB] human gut metagenome; human gut
6099
6026
-
Lys
TTT
[ENA]
¢þ
>WENV182824153
OKCB01000240
[OKCB] human gut metagenome; human gut
6177
6103
-
Gln
TTG
[ENA]
¢þ
>WENV182824141
OKCB01000139
[OKCB] human gut metagenome; human gut
6198
6271
+
fMet
CAT
[ENA]
¢þ
>WENV182824152
OKCB01000240
[OKCB] human gut metagenome; human gut
6265
6182
-
Tyr
GTA
[ENA]
¢þ
>WENV182824142
OKCB01000139
[OKCB] human gut metagenome; human gut
6286
6361
+
Asp
GTC
[ENA]
¢þ
>WENV182824151
OKCB01000240
[OKCB] human gut metagenome; human gut
6357
6282
-
Val
TAC
[ENA]
¢þ
>WENV182824143
OKCB01000139
[OKCB] human gut metagenome; human gut
6371
6445
+
Phe
GAA
[ENA]
¢þ
>WENV182824144
OKCB01000139
[OKCB] human gut metagenome; human gut
6458
6533
+
His
GTG
[ENA]
¢þ
>WENV182824145
OKCB01000139
[OKCB] human gut metagenome; human gut
6551
6624
+
Gly
TCC
[ENA]
¢þ
>WENV182824133
OKCB01000038
[OKCB] human gut metagenome; human gut
6608
6681
+
Thr
GGT
[ENA]
¢þ
>WENV182824146
OKCB01000139
[OKCB] human gut metagenome; human gut
6634
6708
+
Asn
GTT
[ENA]
¢þ
>WENV182824147
OKCB01000139
[OKCB] human gut metagenome; human gut
6709
6782
+
Glu
TTC
[ENA]
¢þ
>WENV182824148
OKCB01000139
[OKCB] human gut metagenome; human gut
6833
6923
+
Ser
GGA
[ENA]
¢þ
>WENV182824139
OKCB01000136
[OKCB] human gut metagenome; human gut
8116
8045
-
Arg
CCG
[ENA]
¢þ
>WENV182824112
OKCB01000002
[OKCB] human gut metagenome; human gut
18115
18187
+
Lys
CTT
[ENA]
¢þ
>WENV182824135
OKCB01000045
[OKCB] human gut metagenome; human gut
18567
18492
-
Arg
TCT
[ENA]
¢þ
>WENV182824134
OKCB01000038
[OKCB] human gut metagenome; human gut
21772
21844
+
Thr
CGT
[ENA]
¢þ
>WENV182824132
OKCB01000031
[OKCB] human gut metagenome; human gut
24928
24998
+
Cys
GCA
[ENA]
¢þ
>WENV182824119
OKCB01000009
[OKCB] human gut metagenome; human gut
39918
39845
-
Glu
TTC
[ENA]
¢þ
>WENV182824118
OKCB01000009
[OKCB] human gut metagenome; human gut
40019
39946
-
Gln
TTG
[ENA]
¢þ
>WENV182824113
OKCB01000002
[OKCB] human gut metagenome; human gut
40802
40887
+
Leu
AAG
[ENA]
¢þ
>WENV182824117
OKCB01000007
[OKCB] human gut metagenome; human gut
42094
42023
-
Arg
CCT
[ENA]
¢þ
>WENV182824122
OKCB01000011
[OKCB] human gut metagenome; human gut
67346
67275
-
Arg
CCG
[ENA]
¢þ
>WENV182824121
OKCB01000011
[OKCB] human gut metagenome; human gut
68811
68738
-
Gln
TTG
[ENA]
¢þ
>WENV182824120
OKCB01000011
[OKCB] human gut metagenome; human gut
68959
68879
-
Tyr
GTA
[ENA]
¢þ
>WENV182824114
OKCB01000003
[OKCB] human gut metagenome; human gut
128045
127972
-
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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