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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKDL] human gut metagenome; human gut
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182829000
OKDL01000053
[OKDL] human gut metagenome; human gut
64
136
+
Thr
GGT
[ENA]
¢þ
>WENV182829034
OKDL01000192
[OKDL] human gut metagenome; human gut
93
20
-
Thr
CGT
[ENA]
¢þ
>WENV182829043
OKDL01000542
[OKDL] human gut metagenome; human gut
138
213
+
Glu
TTC
[ENA]
¢þ
>WENV182828957
OKDL01000012
[OKDL] human gut metagenome; human gut
172
88
-
Tyr
GTA
[ENA]
¢þ
>WENV182829042
OKDL01000442
[OKDL] human gut metagenome; human gut
198
273
+
Glu
TTC
[ENA]
¢þ
>WENV182829041
OKDL01000245
[OKDL] human gut metagenome; human gut
380
305
-
Thr
GGT
[ENA]
¢þ
>WENV182829040
OKDL01000245
[OKDL] human gut metagenome; human gut
461
387
-
Gly
TCC
[ENA]
¢þ
>WENV182829039
OKDL01000245
[OKDL] human gut metagenome; human gut
662
578
-
Tyr
GTA
[ENA]
¢þ
>WENV182829038
OKDL01000245
[OKDL] human gut metagenome; human gut
746
671
-
Thr
TGT
[ENA]
¢þ
>WENV182829037
OKDL01000235
[OKDL] human gut metagenome; human gut
1278
1205
-
Lys
CTT
[ENA]
¢þ
>WENV182829001
OKDL01000053
[OKDL] human gut metagenome; human gut
1424
1497
+
Trp
CCA
[ENA]
¢þ
>WENV182829033
OKDL01000184
[OKDL] human gut metagenome; human gut
1873
1799
-
Asp
GTC
[ENA]
¢þ
>WENV182829036
OKDL01000218
[OKDL] human gut metagenome; human gut
3329
3255
-
Ala
TGC
[ENA]
¢þ
>WENV182829035
OKDL01000218
[OKDL] human gut metagenome; human gut
3434
3358
-
Ile
GAT
[ENA]
¢þ
>WENV182828955
OKDL01000009
[OKDL] human gut metagenome; human gut
4023
3947
-
Arg
TCT
[ENA]
¢þ
>WENV182829025
OKDL01000125
[OKDL] human gut metagenome; human gut
5192
5119
-
Lys
TTT
[ENA]
¢þ
>WENV182829023
OKDL01000114
[OKDL] human gut metagenome; human gut
6466
6383
-
Tyr
GTA
[ENA]
¢þ
>WENV182829030
OKDL01000144
[OKDL] human gut metagenome; human gut
6529
6602
+
Phe
GAA
[ENA]
¢þ
>WENV182829032
OKDL01000170
[OKDL] human gut metagenome; human gut
7799
7871
+
Arg
CCT
[ENA]
¢þ
>WENV182828994
OKDL01000040
[OKDL] human gut metagenome; human gut
8200
8124
-
Pro
CGG
[ENA]
¢þ
>WENV182828989
OKDL01000035
[OKDL] human gut metagenome; human gut
8309
8385
+
Met
CAT
[ENA]
¢þ
>WENV182828997
OKDL01000042
[OKDL] human gut metagenome; human gut
9318
9243
-
Asn
GTT
[ENA]
¢þ
>WENV182828951
OKDL01000006
[OKDL] human gut metagenome; human gut
9754
9679
-
Phe
GAA
[ENA]
¢þ
>WENV182828995
OKDL01000042
[OKDL] human gut metagenome; human gut
11067
11142
+
Asn
GTT
[ENA]
¢þ
>WENV182829031
OKDL01000160
[OKDL] human gut metagenome; human gut
12372
12454
+
Leu
TAG
[ENA]
¢þ
>WENV182828962
OKDL01000014
[OKDL] human gut metagenome; human gut
13327
13251
-
fMet
CAT
[ENA]
¢þ
>WENV182828996
OKDL01000042
[OKDL] human gut metagenome; human gut
13476
13551
+
Asn
GTT
[ENA]
¢þ
>WENV182828985
OKDL01000028
[OKDL] human gut metagenome; human gut
14141
14216
+
Thr
CGT
[ENA]
¢þ
>WENV182829002
OKDL01000055
[OKDL] human gut metagenome; human gut
14723
14650
-
fMet
CAT
[ENA]
¢þ
>WENV182829014
OKDL01000077
[OKDL] human gut metagenome; human gut
14901
14826
-
Pro
TGG
[ENA]
¢þ
>WENV182829015
OKDL01000081
[OKDL] human gut metagenome; human gut
15029
15103
+
Arg
TCT
[ENA]
¢þ
>WENV182829019
OKDL01000103
[OKDL] human gut metagenome; human gut
15154
15241
+
Ser
GCT
[ENA]
¢þ
>WENV182829020
OKDL01000103
[OKDL] human gut metagenome; human gut
15319
15391
+
Glu
CTC
[ENA]
¢þ
>WENV182829021
OKDL01000107
[OKDL] human gut metagenome; human gut
15501
15574
+
Gly
GCC
[ENA]
¢þ
>WENV182829022
OKDL01000107
[OKDL] human gut metagenome; human gut
15588
15672
+
Leu
TAA
[ENA]
¢þ
>WENV182828998
OKDL01000047
[OKDL] human gut metagenome; human gut
16268
16342
+
Ala
GGC
[ENA]
¢þ
>WENV182829026
OKDL01000131
[OKDL] human gut metagenome; human gut
16284
16357
+
Gly
GCC
[ENA]
¢þ
>WENV182829027
OKDL01000131
[OKDL] human gut metagenome; human gut
16382
16464
+
Leu
CAG
[ENA]
¢þ
>WENV182829028
OKDL01000131
[OKDL] human gut metagenome; human gut
16501
16585
+
Leu
GAG
[ENA]
¢þ
>WENV182829029
OKDL01000131
[OKDL] human gut metagenome; human gut
16607
16680
+
Gly
GCC
[ENA]
¢þ
>WENV182829024
OKDL01000122
[OKDL] human gut metagenome; human gut
19577
19649
+
Cys
GCA
[ENA]
¢þ
>WENV182828984
OKDL01000025
[OKDL] human gut metagenome; human gut
20581
20496
-
Ser
TGA
[ENA]
¢þ
>WENV182829018
OKDL01000102
[OKDL] human gut metagenome; human gut
20999
21070
+
Gln
TTG
[ENA]
¢þ
>WENV182829016
OKDL01000095
[OKDL] human gut metagenome; human gut
22636
22560
-
Asp
GTC
[ENA]
¢þ
>WENV182829013
OKDL01000076
[OKDL] human gut metagenome; human gut
26155
26071
-
Leu
CAA
[ENA]
¢þ
>WENV182829017
OKDL01000098
[OKDL] human gut metagenome; human gut
27381
27454
+
Gly
CCC
[ENA]
¢þ
>WENV182828975
OKDL01000018
[OKDL] human gut metagenome; human gut
30643
30568
-
Asn
GTT
[ENA]
¢þ
>WENV182828971
OKDL01000018
[OKDL] human gut metagenome; human gut
31635
31724
+
Ser
CGA
[ENA]
¢þ
>WENV182829005
OKDL01000068
[OKDL] human gut metagenome; human gut
33498
33425
-
Lys
TTT
[ENA]
¢þ
>WENV182829003
OKDL01000061
[OKDL] human gut metagenome; human gut
34737
34812
+
Val
TAC
[ENA]
¢þ
>WENV182829004
OKDL01000061
[OKDL] human gut metagenome; human gut
34863
34938
+
Val
TAC
[ENA]
¢þ
>WENV182829006
OKDL01000071
[OKDL] human gut metagenome; human gut
35952
36026
+
Thr
TGT
[ENA]
¢þ
>WENV182829012
OKDL01000075
[OKDL] human gut metagenome; human gut
36737
36662
-
Lys
TTT
[ENA]
¢þ
>WENV182829011
OKDL01000075
[OKDL] human gut metagenome; human gut
36817
36742
-
Val
TAC
[ENA]
¢þ
>WENV182829010
OKDL01000075
[OKDL] human gut metagenome; human gut
36937
36862
-
Val
TAC
[ENA]
¢þ
>WENV182829009
OKDL01000075
[OKDL] human gut metagenome; human gut
37057
36982
-
Val
TAC
[ENA]
¢þ
>WENV182829007
OKDL01000075
[OKDL] human gut metagenome; human gut
39756
39831
+
Ala
GGC
[ENA]
¢þ
>WENV182829008
OKDL01000075
[OKDL] human gut metagenome; human gut
39871
39946
+
Ala
GGC
[ENA]
¢þ
>WENV182828991
OKDL01000037
[OKDL] human gut metagenome; human gut
40215
40141
-
Arg
CCT
[ENA]
¢þ
>WENV182828948
OKDL01000004
[OKDL] human gut metagenome; human gut
51382
51298
-
Leu
CAA
[ENA]
¢þ
>WENV182828993
OKDL01000039
[OKDL] human gut metagenome; human gut
51659
51587
-
Glu
TTC
[ENA]
¢þ
>WENV182828999
OKDL01000049
[OKDL] human gut metagenome; human gut
52044
52118
+
Asp
GTC
[ENA]
¢þ
>WENV182828987
OKDL01000030
[OKDL] human gut metagenome; human gut
52770
52844
+
Asn
GTT
[ENA]
¢þ
>WENV182828988
OKDL01000030
[OKDL] human gut metagenome; human gut
52873
52947
+
Asn
GTT
[ENA]
¢þ
>WENV182828982
OKDL01000021
[OKDL] human gut metagenome; human gut
52934
52859
-
Pro
GGG
[ENA]
¢þ
>WENV182828963
OKDL01000016
[OKDL] human gut metagenome; human gut
54157
54230
+
Trp
CCA
[ENA]
¢þ
>WENV182828953
OKDL01000007
[OKDL] human gut metagenome; human gut
54841
54754
-
Ser
GGA
[ENA]
¢þ
>WENV182828956
OKDL01000010
[OKDL] human gut metagenome; human gut
56145
56239
+
SeC
TCA
[ENA]
¢þ
>WENV182828986
OKDL01000029
[OKDL] human gut metagenome; human gut
61899
61811
-
Ser
GGA
[ENA]
¢þ
>WENV182828983
OKDL01000023
[OKDL] human gut metagenome; human gut
64969
65043
+
His
GTG
[ENA]
¢þ
>WENV182828992
OKDL01000038
[OKDL] human gut metagenome; human gut
66652
66726
+
Ile2
CAT
[ENA]
¢þ
>WENV182828964
OKDL01000017
[OKDL] human gut metagenome; human gut
72600
72676
+
Met
CAT
[ENA]
¢þ
>WENV182828965
OKDL01000017
[OKDL] human gut metagenome; human gut
72685
72769
+
Leu
TAG
[ENA]
¢þ
>WENV182828966
OKDL01000017
[OKDL] human gut metagenome; human gut
72793
72867
+
Gln
TTG
[ENA]
¢þ
>WENV182828967
OKDL01000017
[OKDL] human gut metagenome; human gut
72902
72976
+
Gln
TTG
[ENA]
¢þ
>WENV182828968
OKDL01000017
[OKDL] human gut metagenome; human gut
72992
73068
+
Met
CAT
[ENA]
¢þ
>WENV182828969
OKDL01000017
[OKDL] human gut metagenome; human gut
73117
73191
+
Gln
CTG
[ENA]
¢þ
>WENV182828970
OKDL01000017
[OKDL] human gut metagenome; human gut
73229
73303
+
Gln
CTG
[ENA]
¢þ
>WENV182828990
OKDL01000036
[OKDL] human gut metagenome; human gut
75014
74930
-
Tyr
GTA
[ENA]
¢þ
>WENV182828980
OKDL01000020
[OKDL] human gut metagenome; human gut
77964
77888
-
Pro
TGG
[ENA]
¢þ
>WENV182828979
OKDL01000020
[OKDL] human gut metagenome; human gut
78093
78007
-
Leu
CAG
[ENA]
¢þ
>WENV182828978
OKDL01000020
[OKDL] human gut metagenome; human gut
78189
78114
-
His
GTG
[ENA]
¢þ
>WENV182828977
OKDL01000020
[OKDL] human gut metagenome; human gut
78324
78248
-
Arg
CCG
[ENA]
¢þ
>WENV182828972
OKDL01000018
[OKDL] human gut metagenome; human gut
84410
84485
+
Gly
GCC
[ENA]
¢þ
>WENV182828973
OKDL01000018
[OKDL] human gut metagenome; human gut
84539
84612
+
Cys
GCA
[ENA]
¢þ
>WENV182828974
OKDL01000018
[OKDL] human gut metagenome; human gut
84625
84711
+
Leu
TAA
[ENA]
¢þ
>WENV182828981
OKDL01000021
[OKDL] human gut metagenome; human gut
97545
97616
+
Gln
CTG
[ENA]
¢þ
>WENV182828934
OKDL01000001
[OKDL] human gut metagenome; human gut
99296
99382
+
Leu
GAG
[ENA]
¢þ
>WENV182828935
OKDL01000001
[OKDL] human gut metagenome; human gut
103163
103239
+
fMet
CAT
[ENA]
¢þ
>WENV182828976
OKDL01000020
[OKDL] human gut metagenome; human gut
112868
112793
-
Trp
CCA
[ENA]
¢þ
>WENV182828958
OKDL01000013
[OKDL] human gut metagenome; human gut
119227
119151
-
Arg
TCT
[ENA]
¢þ
>WENV182828950
OKDL01000006
[OKDL] human gut metagenome; human gut
119662
119735
+
Gly
CCC
[ENA]
¢þ
>WENV182828937
OKDL01000002
[OKDL] human gut metagenome; human gut
129349
129425
+
Val
GAC
[ENA]
¢þ
>WENV182828938
OKDL01000002
[OKDL] human gut metagenome; human gut
129430
129506
+
Val
GAC
[ENA]
¢þ
>WENV182828959
OKDL01000014
[OKDL] human gut metagenome; human gut
134292
134384
+
Ser
GCT
[ENA]
¢þ
>WENV182828960
OKDL01000014
[OKDL] human gut metagenome; human gut
134388
134464
+
Arg
ACG
[ENA]
¢þ
>WENV182828961
OKDL01000014
[OKDL] human gut metagenome; human gut
134528
134604
+
Arg
ACG
[ENA]
¢þ
>WENV182828949
OKDL01000005
[OKDL] human gut metagenome; human gut
137005
136929
-
Pro
GGG
[ENA]
¢þ
>WENV182828954
OKDL01000008
[OKDL] human gut metagenome; human gut
147971
148058
+
Ser
GGA
[ENA]
¢þ
>WENV182828952
OKDL01000007
[OKDL] human gut metagenome; human gut
150663
150576
-
Ser
TGA
[ENA]
¢þ
>WENV182828947
OKDL01000004
[OKDL] human gut metagenome; human gut
167894
167819
-
Gly
GCC
[ENA]
¢þ
>WENV182828946
OKDL01000004
[OKDL] human gut metagenome; human gut
168006
167931
-
Gly
GCC
[ENA]
¢þ
>WENV182828945
OKDL01000004
[OKDL] human gut metagenome; human gut
168118
168043
-
Gly
GCC
[ENA]
¢þ
>WENV182828944
OKDL01000004
[OKDL] human gut metagenome; human gut
199851
199926
+
Phe
GAA
[ENA]
¢þ
>WENV182828940
OKDL01000002
[OKDL] human gut metagenome; human gut
209559
209484
-
Thr
TGT
[ENA]
¢þ
>WENV182828939
OKDL01000002
[OKDL] human gut metagenome; human gut
209639
209565
-
Asn
GTT
[ENA]
¢þ
>WENV182828936
OKDL01000001
[OKDL] human gut metagenome; human gut
214210
214135
-
Ile2
CAT
[ENA]
¢þ
>WENV182828941
OKDL01000003
[OKDL] human gut metagenome; human gut
261401
261487
+
Leu
CAG
[ENA]
¢þ
>WENV182828942
OKDL01000003
[OKDL] human gut metagenome; human gut
261516
261602
+
Leu
CAG
[ENA]
¢þ
>WENV182828943
OKDL01000003
[OKDL] human gut metagenome; human gut
261637
261723
+
Leu
CAG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK