This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKEK] human gut metagenome; human gut
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182832157
OKEK01000792
[OKEK] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182832162
OKEK01001229
[OKEK] human gut metagenome; human gut
155
79
-
Val
GAC
[ENA]
¢þ
>WENV182832144
OKEK01000275
[OKEK] human gut metagenome; human gut
163
79
-
Leu
TAG
[ENA]
¢þ
>WENV182832158
OKEK01000832
[OKEK] human gut metagenome; human gut
172
97
-
Ala
GGC
[ENA]
¢þ
>WENV182832165
OKEK01001299
[OKEK] human gut metagenome; human gut
209
301
+
Ser
GCT
[ENA]
¢þ
>WENV182832146
OKEK01000305
[OKEK] human gut metagenome; human gut
224
148
-
Pro
CGG
[ENA]
¢þ
>WENV182832143
OKEK01000275
[OKEK] human gut metagenome; human gut
248
172
-
Met
CAT
[ENA]
¢þ
>WENV182832167
OKEK01001312
[OKEK] human gut metagenome; human gut
256
181
-
Lys
TTT
[ENA]
¢þ
>WENV182832125
OKEK01000018
[OKEK] human gut metagenome; human gut
274
350
+
Arg
ACG
[ENA]
¢þ
>WENV182832166
OKEK01001299
[OKEK] human gut metagenome; human gut
306
382
+
Arg
ACG
[ENA]
¢þ
>WENV182832164
OKEK01001288
[OKEK] human gut metagenome; human gut
351
276
-
Thr
GGT
[ENA]
¢þ
>WENV182832163
OKEK01001288
[OKEK] human gut metagenome; human gut
431
357
-
Gly
TCC
[ENA]
¢þ
>WENV182832156
OKEK01000775
[OKEK] human gut metagenome; human gut
525
449
-
Pro
GGG
[ENA]
¢þ
>WENV182832137
OKEK01000127
[OKEK] human gut metagenome; human gut
594
518
-
fMet
CAT
[ENA]
¢þ
>WENV182832161
OKEK01001121
[OKEK] human gut metagenome; human gut
738
825
+
Ser
GGA
[ENA]
¢þ
>WENV182832152
OKEK01000600
[OKEK] human gut metagenome; human gut
1231
1318
+
Ser
TGA
[ENA]
¢þ
>WENV182832150
OKEK01000482
[OKEK] human gut metagenome; human gut
1233
1157
-
Asp
GTC
[ENA]
¢þ
>WENV182832160
OKEK01000936
[OKEK] human gut metagenome; human gut
1343
1267
-
Val
GAC
[ENA]
¢þ
>WENV182832159
OKEK01000906
[OKEK] human gut metagenome; human gut
1374
1449
+
Thr
TGT
[ENA]
¢þ
>WENV182832153
OKEK01000637
[OKEK] human gut metagenome; human gut
1592
1503
-
Ser
CGA
[ENA]
¢þ
>WENV182832151
OKEK01000512
[OKEK] human gut metagenome; human gut
1805
1880
+
Asn
GTT
[ENA]
¢þ
>WENV182832155
OKEK01000690
[OKEK] human gut metagenome; human gut
2170
2086
-
Leu
CAA
[ENA]
¢þ
>WENV182832154
OKEK01000685
[OKEK] human gut metagenome; human gut
2221
2294
+
Gly
CCC
[ENA]
¢þ
>WENV182832136
OKEK01000103
[OKEK] human gut metagenome; human gut
2926
3020
+
SeC
TCA
[ENA]
¢þ
>WENV182832141
OKEK01000210
[OKEK] human gut metagenome; human gut
3241
3166
-
Thr
CGT
[ENA]
¢þ
>WENV182832149
OKEK01000368
[OKEK] human gut metagenome; human gut
4020
3934
-
Leu
TAA
[ENA]
¢þ
>WENV182832148
OKEK01000368
[OKEK] human gut metagenome; human gut
4107
4034
-
Cys
GCA
[ENA]
¢þ
>WENV182832147
OKEK01000368
[OKEK] human gut metagenome; human gut
4223
4148
-
Gly
GCC
[ENA]
¢þ
>WENV182832133
OKEK01000087
[OKEK] human gut metagenome; human gut
4934
4860
-
Arg
CCT
[ENA]
¢þ
>WENV182832129
OKEK01000034
[OKEK] human gut metagenome; human gut
5228
5152
-
Pro
TGG
[ENA]
¢þ
>WENV182832128
OKEK01000034
[OKEK] human gut metagenome; human gut
5357
5271
-
Leu
CAG
[ENA]
¢þ
>WENV182832145
OKEK01000302
[OKEK] human gut metagenome; human gut
5408
5333
-
Thr
TGT
[ENA]
¢þ
>WENV182832127
OKEK01000034
[OKEK] human gut metagenome; human gut
5456
5381
-
His
GTG
[ENA]
¢þ
>WENV182832126
OKEK01000034
[OKEK] human gut metagenome; human gut
5588
5512
-
Arg
CCG
[ENA]
¢þ
>WENV182832138
OKEK01000139
[OKEK] human gut metagenome; human gut
6926
6850
-
fMet
CAT
[ENA]
¢þ
>WENV182832142
OKEK01000221
[OKEK] human gut metagenome; human gut
7112
7036
-
Asp
GTC
[ENA]
¢þ
>WENV182832139
OKEK01000170
[OKEK] human gut metagenome; human gut
7526
7602
+
Arg
TCT
[ENA]
¢þ
>WENV182832140
OKEK01000185
[OKEK] human gut metagenome; human gut
8068
7993
-
Ile2
CAT
[ENA]
¢þ
>WENV182832135
OKEK01000102
[OKEK] human gut metagenome; human gut
11374
11300
-
Gln
CTG
[ENA]
¢þ
>WENV182832134
OKEK01000092
[OKEK] human gut metagenome; human gut
12161
12236
+
Phe
GAA
[ENA]
¢þ
>WENV182832132
OKEK01000065
[OKEK] human gut metagenome; human gut
12823
12909
+
Leu
GAG
[ENA]
¢þ
>WENV182832130
OKEK01000048
[OKEK] human gut metagenome; human gut
15755
15669
-
Leu
CAG
[ENA]
¢þ
>WENV182832131
OKEK01000052
[OKEK] human gut metagenome; human gut
15873
15798
-
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK