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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKFZ] human gut metagenome; human gut
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182836767
OKFZ01000638
[OKFZ] human gut metagenome; human gut
25
100
+
Glu
TTC
[ENA]
¢þ
>WENV182836700
OKFZ01000016
[OKFZ] human gut metagenome; human gut
64
139
+
Trp
CCA
[ENA]
¢þ
>WENV182836775
OKFZ01001170
[OKFZ] human gut metagenome; human gut
77
152
+
Trp
CCA
[ENA]
¢þ
>WENV182836710
OKFZ01000041
[OKFZ] human gut metagenome; human gut
84
159
+
Val
TAC
[ENA]
¢þ
>WENV182836713
OKFZ01000042
[OKFZ] human gut metagenome; human gut
131
55
-
Pro
TGG
[ENA]
¢þ
>WENV182836688
OKFZ01000002
[OKFZ] human gut metagenome; human gut
148
75
-
Cys
GCA
[ENA]
¢þ
>WENV182836719
OKFZ01000052
[OKFZ] human gut metagenome; human gut
151
76
-
Asp
GTC
[ENA]
¢þ
>WENV182836778
OKFZ01002599
[OKFZ] human gut metagenome; human gut
155
81
-
Gln
TTG
[ENA]
¢þ
>WENV182836779
OKFZ01002881
[OKFZ] human gut metagenome; human gut
169
85
-
Tyr
GTA
[ENA]
¢þ
>WENV182836780
OKFZ01003054
[OKFZ] human gut metagenome; human gut
176
262
+
Leu
CAG
[ENA]
¢þ
>WENV182836712
OKFZ01000042
[OKFZ] human gut metagenome; human gut
212
137
-
His
GTG
[ENA]
¢þ
>WENV182836773
OKFZ01000827
[OKFZ] human gut metagenome; human gut
218
304
+
Leu
GAG
[ENA]
¢þ
>WENV182836687
OKFZ01000002
[OKFZ] human gut metagenome; human gut
227
152
-
Gly
GCC
[ENA]
¢þ
>WENV182836725
OKFZ01000067
[OKFZ] human gut metagenome; human gut
231
156
-
Thr
GGT
[ENA]
¢þ
>WENV182836777
OKFZ01002599
[OKFZ] human gut metagenome; human gut
270
186
-
Leu
TAG
[ENA]
¢þ
>WENV182836724
OKFZ01000067
[OKFZ] human gut metagenome; human gut
309
235
-
Gly
TCC
[ENA]
¢þ
>WENV182836753
OKFZ01000202
[OKFZ] human gut metagenome; human gut
309
235
-
Arg
CCG
[ENA]
¢þ
>WENV182836735
OKFZ01000093
[OKFZ] human gut metagenome; human gut
311
235
-
Met
CAT
[ENA]
¢þ
>WENV182836711
OKFZ01000042
[OKFZ] human gut metagenome; human gut
315
239
-
Arg
CCG
[ENA]
¢þ
>WENV182836714
OKFZ01000048
[OKFZ] human gut metagenome; human gut
360
435
+
Trp
CCA
[ENA]
¢þ
>WENV182836776
OKFZ01002599
[OKFZ] human gut metagenome; human gut
363
287
-
Met
CAT
[ENA]
¢þ
>WENV182836774
OKFZ01000827
[OKFZ] human gut metagenome; human gut
365
441
+
fMet
CAT
[ENA]
¢þ
>WENV182836759
OKFZ01000384
[OKFZ] human gut metagenome; human gut
381
455
+
Val
TAC
[ENA]
¢þ
>WENV182836734
OKFZ01000093
[OKFZ] human gut metagenome; human gut
392
317
-
Thr
GGT
[ENA]
¢þ
>WENV182836723
OKFZ01000067
[OKFZ] human gut metagenome; human gut
436
352
-
Tyr
GTA
[ENA]
¢þ
>WENV182836740
OKFZ01000113
[OKFZ] human gut metagenome; human gut
437
362
-
Lys
TTT
[ENA]
¢þ
>WENV182836760
OKFZ01000384
[OKFZ] human gut metagenome; human gut
460
534
+
Lys
TTT
[ENA]
¢þ
>WENV182836733
OKFZ01000093
[OKFZ] human gut metagenome; human gut
499
424
-
fMet
CAT
[ENA]
¢þ
>WENV182836739
OKFZ01000113
[OKFZ] human gut metagenome; human gut
516
442
-
Gln
TTG
[ENA]
¢þ
>WENV182836772
OKFZ01000671
[OKFZ] human gut metagenome; human gut
538
467
-
Gln
TTG
[ENA]
¢þ
>WENV182836722
OKFZ01000067
[OKFZ] human gut metagenome; human gut
543
468
-
Thr
TGT
[ENA]
¢þ
>WENV182836715
OKFZ01000048
[OKFZ] human gut metagenome; human gut
548
624
+
Arg
ACG
[ENA]
¢þ
>WENV182836761
OKFZ01000384
[OKFZ] human gut metagenome; human gut
549
632
+
Leu
TAG
[ENA]
¢þ
>WENV182836755
OKFZ01000259
[OKFZ] human gut metagenome; human gut
570
642
+
Ala
TGC
[ENA]
¢þ
>WENV182836732
OKFZ01000093
[OKFZ] human gut metagenome; human gut
589
505
-
Tyr
GTA
[ENA]
¢þ
>WENV182836738
OKFZ01000113
[OKFZ] human gut metagenome; human gut
616
541
-
His
GTG
[ENA]
¢þ
>WENV182836771
OKFZ01000671
[OKFZ] human gut metagenome; human gut
618
544
-
His
GTG
[ENA]
¢þ
>WENV182836731
OKFZ01000093
[OKFZ] human gut metagenome; human gut
675
600
-
Thr
TGT
[ENA]
¢þ
>WENV182836770
OKFZ01000671
[OKFZ] human gut metagenome; human gut
702
632
-
Trp
CCA
[ENA]
¢þ
>WENV182836762
OKFZ01000384
[OKFZ] human gut metagenome; human gut
718
789
+
Gly
GCC
[ENA]
¢þ
>WENV182836766
OKFZ01000474
[OKFZ] human gut metagenome; human gut
760
685
-
Lys
TTT
[ENA]
¢þ
>WENV182836769
OKFZ01000671
[OKFZ] human gut metagenome; human gut
789
709
-
Tyr
GTA
[ENA]
¢þ
>WENV182836763
OKFZ01000384
[OKFZ] human gut metagenome; human gut
805
890
+
Leu
TAA
[ENA]
¢þ
>WENV182836768
OKFZ01000671
[OKFZ] human gut metagenome; human gut
873
801
-
Phe
GAA
[ENA]
¢þ
>WENV182836764
OKFZ01000384
[OKFZ] human gut metagenome; human gut
905
978
+
Arg
ACG
[ENA]
¢þ
>WENV182836757
OKFZ01000270
[OKFZ] human gut metagenome; human gut
907
832
-
Ala
TGC
[ENA]
¢þ
>WENV182836756
OKFZ01000270
[OKFZ] human gut metagenome; human gut
1022
946
-
Ile
GAT
[ENA]
¢þ
>WENV182836765
OKFZ01000384
[OKFZ] human gut metagenome; human gut
1068
1141
+
Pro
TGG
[ENA]
¢þ
>WENV182836754
OKFZ01000221
[OKFZ] human gut metagenome; human gut
1331
1404
+
Gly
CCC
[ENA]
¢þ
>WENV182836743
OKFZ01000125
[OKFZ] human gut metagenome; human gut
1445
1370
-
Lys
CTT
[ENA]
¢þ
>WENV182836758
OKFZ01000272
[OKFZ] human gut metagenome; human gut
1486
1562
+
Val
GAC
[ENA]
¢þ
>WENV182836742
OKFZ01000125
[OKFZ] human gut metagenome; human gut
1540
1465
-
Lys
TTT
[ENA]
¢þ
>WENV182836744
OKFZ01000131
[OKFZ] human gut metagenome; human gut
1658
1733
+
Phe
GAA
[ENA]
¢þ
>WENV182836745
OKFZ01000131
[OKFZ] human gut metagenome; human gut
1739
1814
+
Asn
GTT
[ENA]
¢þ
>WENV182836709
OKFZ01000038
[OKFZ] human gut metagenome; human gut
1902
1978
+
fMet
CAT
[ENA]
¢þ
>WENV182836750
OKFZ01000181
[OKFZ] human gut metagenome; human gut
1965
2041
+
Pro
TGG
[ENA]
¢þ
>WENV182836751
OKFZ01000181
[OKFZ] human gut metagenome; human gut
2052
2125
+
Gly
TCC
[ENA]
¢þ
>WENV182836752
OKFZ01000181
[OKFZ] human gut metagenome; human gut
2227
2303
+
Arg
TCT
[ENA]
¢þ
>WENV182836748
OKFZ01000150
[OKFZ] human gut metagenome; human gut
4370
4460
+
Ser
GCT
[ENA]
¢þ
>WENV182836704
OKFZ01000036
[OKFZ] human gut metagenome; human gut
5963
6039
+
fMet
CAT
[ENA]
¢þ
>WENV182836749
OKFZ01000154
[OKFZ] human gut metagenome; human gut
6398
6473
+
Gly
GCC
[ENA]
¢þ
>WENV182836741
OKFZ01000117
[OKFZ] human gut metagenome; human gut
6778
6867
+
Ser
GGA
[ENA]
¢þ
>WENV182836708
OKFZ01000037
[OKFZ] human gut metagenome; human gut
6943
6867
-
Arg
ACG
[ENA]
¢þ
>WENV182836747
OKFZ01000131
[OKFZ] human gut metagenome; human gut
7022
6947
-
Ala
GGC
[ENA]
¢þ
>WENV182836707
OKFZ01000037
[OKFZ] human gut metagenome; human gut
7073
6997
-
Arg
ACG
[ENA]
¢þ
>WENV182836706
OKFZ01000037
[OKFZ] human gut metagenome; human gut
7188
7095
-
Ser
GCT
[ENA]
¢þ
>WENV182836737
OKFZ01000108
[OKFZ] human gut metagenome; human gut
7532
7608
+
Asp
GTC
[ENA]
¢þ
>WENV182836689
OKFZ01000006
[OKFZ] human gut metagenome; human gut
8253
8179
-
Ile2
CAT
[ENA]
¢þ
>WENV182836736
OKFZ01000098
[OKFZ] human gut metagenome; human gut
8714
8638
-
Arg
CCT
[ENA]
¢þ
>WENV182836746
OKFZ01000131
[OKFZ] human gut metagenome; human gut
8714
8789
+
Val
TAC
[ENA]
¢þ
>WENV182836716
OKFZ01000048
[OKFZ] human gut metagenome; human gut
8868
8952
+
Leu
TAG
[ENA]
¢þ
>WENV182836701
OKFZ01000022
[OKFZ] human gut metagenome; human gut
12143
12218
+
Lys
CTT
[ENA]
¢þ
>WENV182836721
OKFZ01000063
[OKFZ] human gut metagenome; human gut
13737
13820
+
Leu
CAA
[ENA]
¢þ
>WENV182836697
OKFZ01000010
[OKFZ] human gut metagenome; human gut
14013
13928
-
Leu
GAG
[ENA]
¢þ
>WENV182836703
OKFZ01000033
[OKFZ] human gut metagenome; human gut
14923
14833
-
Ser
CGA
[ENA]
¢þ
>WENV182836694
OKFZ01000008
[OKFZ] human gut metagenome; human gut
15162
15088
-
Gln
TTG
[ENA]
¢þ
>WENV182836693
OKFZ01000008
[OKFZ] human gut metagenome; human gut
15273
15189
-
Leu
TAG
[ENA]
¢þ
>WENV182836717
OKFZ01000051
[OKFZ] human gut metagenome; human gut
15273
15362
+
Ser
TGA
[ENA]
¢þ
>WENV182836692
OKFZ01000008
[OKFZ] human gut metagenome; human gut
15356
15280
-
Met
CAT
[ENA]
¢þ
>WENV182836720
OKFZ01000053
[OKFZ] human gut metagenome; human gut
16417
16492
+
Asn
GTT
[ENA]
¢þ
>WENV182836726
OKFZ01000071
[OKFZ] human gut metagenome; human gut
20264
20339
+
Asp
GTC
[ENA]
¢þ
>WENV182836727
OKFZ01000071
[OKFZ] human gut metagenome; human gut
20345
20420
+
Phe
GAA
[ENA]
¢þ
>WENV182836728
OKFZ01000071
[OKFZ] human gut metagenome; human gut
20428
20502
+
Gly
GCC
[ENA]
¢þ
>WENV182836729
OKFZ01000071
[OKFZ] human gut metagenome; human gut
20512
20586
+
Cys
GCA
[ENA]
¢þ
>WENV182836702
OKFZ01000023
[OKFZ] human gut metagenome; human gut
20529
20440
-
Ser
CGA
[ENA]
¢þ
>WENV182836730
OKFZ01000071
[OKFZ] human gut metagenome; human gut
20601
20689
+
Leu
TAA
[ENA]
¢þ
>WENV182836718
OKFZ01000052
[OKFZ] human gut metagenome; human gut
25521
25611
+
Ser
GGA
[ENA]
¢þ
>WENV182836695
OKFZ01000009
[OKFZ] human gut metagenome; human gut
28557
28645
+
Ser
TGA
[ENA]
¢þ
>WENV182836698
OKFZ01000011
[OKFZ] human gut metagenome; human gut
32145
32069
-
Val
GAC
[ENA]
¢þ
>WENV182836705
OKFZ01000036
[OKFZ] human gut metagenome; human gut
32334
32419
+
Leu
CAA
[ENA]
¢þ
>WENV182836696
OKFZ01000010
[OKFZ] human gut metagenome; human gut
39476
39552
+
Ile2
CAT
[ENA]
¢þ
>WENV182836699
OKFZ01000012
[OKFZ] human gut metagenome; human gut
42082
41987
-
SeC
TCA
[ENA]
¢þ
>WENV182836691
OKFZ01000007
[OKFZ] human gut metagenome; human gut
49678
49602
-
Arg
TCT
[ENA]
¢þ
>WENV182836690
OKFZ01000007
[OKFZ] human gut metagenome; human gut
49788
49712
-
Pro
TGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK