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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OKHO] human gut metagenome; human gut
HIT:
131 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182840800
OKHO01000031
[OKHO] human gut metagenome; human gut
64
139
+
Trp
CCA
[ENA]
¢þ
>WENV182840861
OKHO01000746
[OKHO] human gut metagenome; human gut
83
8
-
fMet
CAT
[ENA]
¢þ
>WENV182840859
OKHO01000208
[OKHO] human gut metagenome; human gut
137
49
-
Leu
TAA
[ENA]
¢þ
>WENV182840834
OKHO01000065
[OKHO] human gut metagenome; human gut
159
84
-
Val
TAC
[ENA]
¢þ
>WENV182840860
OKHO01000746
[OKHO] human gut metagenome; human gut
189
97
-
Ser
TGA
[ENA]
¢þ
>WENV182840858
OKHO01000208
[OKHO] human gut metagenome; human gut
222
148
-
Gly
GCC
[ENA]
¢þ
>WENV182840833
OKHO01000065
[OKHO] human gut metagenome; human gut
263
188
-
Val
TAC
[ENA]
¢þ
>WENV182840857
OKHO01000208
[OKHO] human gut metagenome; human gut
302
227
-
Thr
TGT
[ENA]
¢þ
>WENV182840856
OKHO01000208
[OKHO] human gut metagenome; human gut
391
308
-
Leu
TAG
[ENA]
¢þ
>WENV182840855
OKHO01000208
[OKHO] human gut metagenome; human gut
480
406
-
Lys
TTT
[ENA]
¢þ
>WENV182840854
OKHO01000208
[OKHO] human gut metagenome; human gut
561
486
-
Thr
TGT
[ENA]
¢þ
>WENV182840853
OKHO01000208
[OKHO] human gut metagenome; human gut
653
578
-
Val
TAC
[ENA]
¢þ
>WENV182840847
OKHO01000117
[OKHO] human gut metagenome; human gut
1949
2025
+
Ile
GAT
[ENA]
¢þ
>WENV182840848
OKHO01000117
[OKHO] human gut metagenome; human gut
2054
2128
+
Ala
TGC
[ENA]
¢þ
>WENV182840826
OKHO01000059
[OKHO] human gut metagenome; human gut
2963
2890
-
Lys
CTT
[ENA]
¢þ
>WENV182840788
OKHO01000016
[OKHO] human gut metagenome; human gut
3416
3503
+
Ser
TGA
[ENA]
¢þ
>WENV182840849
OKHO01000119
[OKHO] human gut metagenome; human gut
3475
3550
+
Thr
TGT
[ENA]
¢þ
>WENV182840850
OKHO01000119
[OKHO] human gut metagenome; human gut
3559
3643
+
Tyr
GTA
[ENA]
¢þ
>WENV182840851
OKHO01000119
[OKHO] human gut metagenome; human gut
3760
3834
+
Gly
TCC
[ENA]
¢þ
>WENV182840852
OKHO01000119
[OKHO] human gut metagenome; human gut
3841
3916
+
Thr
GGT
[ENA]
¢þ
>WENV182840840
OKHO01000110
[OKHO] human gut metagenome; human gut
5556
5630
+
Val
TAC
[ENA]
¢þ
>WENV182840841
OKHO01000110
[OKHO] human gut metagenome; human gut
5640
5715
+
Asp
GTC
[ENA]
¢þ
>WENV182840842
OKHO01000110
[OKHO] human gut metagenome; human gut
5761
5833
+
Phe
GAA
[ENA]
¢þ
>WENV182840843
OKHO01000110
[OKHO] human gut metagenome; human gut
5838
5920
+
Tyr
GTA
[ENA]
¢þ
>WENV182840844
OKHO01000110
[OKHO] human gut metagenome; human gut
5924
5997
+
Trp
CCA
[ENA]
¢þ
>WENV182840845
OKHO01000110
[OKHO] human gut metagenome; human gut
6034
6107
+
His
GTG
[ENA]
¢þ
>WENV182840846
OKHO01000110
[OKHO] human gut metagenome; human gut
6121
6195
+
Gln
TTG
[ENA]
¢þ
>WENV182840835
OKHO01000075
[OKHO] human gut metagenome; human gut
6466
6383
-
Tyr
GTA
[ENA]
¢þ
>WENV182840810
OKHO01000037
[OKHO] human gut metagenome; human gut
7507
7433
-
Ile2
CAT
[ENA]
¢þ
>WENV182840811
OKHO01000038
[OKHO] human gut metagenome; human gut
7881
7953
+
Arg
CCT
[ENA]
¢þ
>WENV182840837
OKHO01000080
[OKHO] human gut metagenome; human gut
8191
8267
+
Asp
GTC
[ENA]
¢þ
>WENV182840776
OKHO01000006
[OKHO] human gut metagenome; human gut
9658
9583
-
Phe
GAA
[ENA]
¢þ
>WENV182840839
OKHO01000093
[OKHO] human gut metagenome; human gut
9711
9638
-
Phe
GAA
[ENA]
¢þ
>WENV182840836
OKHO01000076
[OKHO] human gut metagenome; human gut
10439
10368
-
Gln
TTG
[ENA]
¢þ
>WENV182840751
OKHO01000003
[OKHO] human gut metagenome; human gut
14141
14216
+
Thr
CGT
[ENA]
¢þ
>WENV182840824
OKHO01000052
[OKHO] human gut metagenome; human gut
14723
14650
-
fMet
CAT
[ENA]
¢þ
>WENV182840838
OKHO01000089
[OKHO] human gut metagenome; human gut
17969
18042
+
Thr
CGT
[ENA]
¢þ
>WENV182840807
OKHO01000033
[OKHO] human gut metagenome; human gut
19092
19020
-
Glu
CTC
[ENA]
¢þ
>WENV182840806
OKHO01000033
[OKHO] human gut metagenome; human gut
19257
19170
-
Ser
GCT
[ENA]
¢þ
>WENV182840785
OKHO01000011
[OKHO] human gut metagenome; human gut
19452
19380
-
Cys
GCA
[ENA]
¢þ
>WENV182840790
OKHO01000018
[OKHO] human gut metagenome; human gut
20240
20316
+
Arg
TCT
[ENA]
¢þ
>WENV182840805
OKHO01000032
[OKHO] human gut metagenome; human gut
20584
20512
-
Glu
TTC
[ENA]
¢þ
>WENV182840825
OKHO01000059
[OKHO] human gut metagenome; human gut
21221
21146
-
Pro
TGG
[ENA]
¢þ
>WENV182840809
OKHO01000034
[OKHO] human gut metagenome; human gut
22848
22774
-
Asp
GTC
[ENA]
¢þ
>WENV182840832
OKHO01000064
[OKHO] human gut metagenome; human gut
26155
26071
-
Leu
CAA
[ENA]
¢þ
>WENV182840801
OKHO01000031
[OKHO] human gut metagenome; human gut
34608
34684
+
Arg
CCG
[ENA]
¢þ
>WENV182840802
OKHO01000031
[OKHO] human gut metagenome; human gut
34743
34818
+
His
GTG
[ENA]
¢þ
>WENV182840803
OKHO01000031
[OKHO] human gut metagenome; human gut
34839
34925
+
Leu
CAG
[ENA]
¢þ
>WENV182840804
OKHO01000031
[OKHO] human gut metagenome; human gut
34968
35044
+
Pro
TGG
[ENA]
¢þ
>WENV182840827
OKHO01000060
[OKHO] human gut metagenome; human gut
35659
35733
+
Thr
TGT
[ENA]
¢þ
>WENV182840818
OKHO01000042
[OKHO] human gut metagenome; human gut
37673
37599
-
Asn
GTT
[ENA]
¢þ
>WENV182840817
OKHO01000042
[OKHO] human gut metagenome; human gut
37776
37702
-
Asn
GTT
[ENA]
¢þ
>WENV182840828
OKHO01000061
[OKHO] human gut metagenome; human gut
39788
39861
+
Gly
GCC
[ENA]
¢þ
>WENV182840829
OKHO01000061
[OKHO] human gut metagenome; human gut
39886
39968
+
Leu
CAG
[ENA]
¢þ
>WENV182840830
OKHO01000061
[OKHO] human gut metagenome; human gut
40005
40089
+
Leu
GAG
[ENA]
¢þ
>WENV182840795
OKHO01000025
[OKHO] human gut metagenome; human gut
40037
39961
-
Met
CAT
[ENA]
¢þ
>WENV182840831
OKHO01000061
[OKHO] human gut metagenome; human gut
40111
40184
+
Gly
GCC
[ENA]
¢þ
>WENV182840816
OKHO01000041
[OKHO] human gut metagenome; human gut
42602
42676
+
Arg
TCT
[ENA]
¢þ
>WENV182840812
OKHO01000040
[OKHO] human gut metagenome; human gut
44280
44353
+
Gly
GCC
[ENA]
¢þ
>WENV182840813
OKHO01000040
[OKHO] human gut metagenome; human gut
44367
44451
+
Leu
TAA
[ENA]
¢þ
>WENV182840823
OKHO01000046
[OKHO] human gut metagenome; human gut
46429
46502
+
Gly
CCC
[ENA]
¢þ
>WENV182840792
OKHO01000019
[OKHO] human gut metagenome; human gut
53257
53182
-
Pro
GGG
[ENA]
¢þ
>WENV182840793
OKHO01000024
[OKHO] human gut metagenome; human gut
54225
54298
+
Trp
CCA
[ENA]
¢þ
>WENV182840784
OKHO01000011
[OKHO] human gut metagenome; human gut
54452
54367
-
Ser
TGA
[ENA]
¢þ
>WENV182840822
OKHO01000045
[OKHO] human gut metagenome; human gut
55438
55365
-
Trp
CCA
[ENA]
¢þ
>WENV182840742
OKHO01000001
[OKHO] human gut metagenome; human gut
55544
55469
-
Asn
GTT
[ENA]
¢þ
>WENV182840815
OKHO01000040
[OKHO] human gut metagenome; human gut
56153
56080
-
Pro
CGG
[ENA]
¢þ
>WENV182840814
OKHO01000040
[OKHO] human gut metagenome; human gut
56238
56165
-
Phe
GAA
[ENA]
¢þ
>WENV182840821
OKHO01000045
[OKHO] human gut metagenome; human gut
56798
56726
-
Thr
GGT
[ENA]
¢þ
>WENV182840820
OKHO01000045
[OKHO] human gut metagenome; human gut
56995
56912
-
Tyr
GTA
[ENA]
¢þ
>WENV182840819
OKHO01000045
[OKHO] human gut metagenome; human gut
57143
57069
-
Thr
TGT
[ENA]
¢þ
>WENV182840741
OKHO01000001
[OKHO] human gut metagenome; human gut
57953
57878
-
Asn
GTT
[ENA]
¢þ
>WENV182840731
OKHO01000001
[OKHO] human gut metagenome; human gut
59702
59777
+
Asn
GTT
[ENA]
¢þ
>WENV182840798
OKHO01000027
[OKHO] human gut metagenome; human gut
65018
64930
-
Ser
GGA
[ENA]
¢þ
>WENV182840787
OKHO01000015
[OKHO] human gut metagenome; human gut
91270
91188
-
Leu
TAG
[ENA]
¢þ
>WENV182840791
OKHO01000019
[OKHO] human gut metagenome; human gut
97868
97939
+
Gln
CTG
[ENA]
¢þ
>WENV182840789
OKHO01000016
[OKHO] human gut metagenome; human gut
99238
99325
+
Ser
GGA
[ENA]
¢þ
>WENV182840760
OKHO01000004
[OKHO] human gut metagenome; human gut
99296
99382
+
Leu
GAG
[ENA]
¢þ
>WENV182840740
OKHO01000001
[OKHO] human gut metagenome; human gut
99651
99576
-
Asn
GTT
[ENA]
¢þ
>WENV182840732
OKHO01000001
[OKHO] human gut metagenome; human gut
100643
100732
+
Ser
CGA
[ENA]
¢þ
>WENV182840780
OKHO01000008
[OKHO] human gut metagenome; human gut
101386
101292
-
SeC
TCA
[ENA]
¢þ
>WENV182840808
OKHO01000034
[OKHO] human gut metagenome; human gut
102495
102568
+
Lys
TTT
[ENA]
¢þ
>WENV182840761
OKHO01000004
[OKHO] human gut metagenome; human gut
103163
103239
+
fMet
CAT
[ENA]
¢þ
>WENV182840782
OKHO01000009
[OKHO] human gut metagenome; human gut
107353
107279
-
Ala
GGC
[ENA]
¢þ
>WENV182840794
OKHO01000025
[OKHO] human gut metagenome; human gut
115473
115400
-
Lys
TTT
[ENA]
¢þ
>WENV182840786
OKHO01000013
[OKHO] human gut metagenome; human gut
116662
116749
+
Ser
GGA
[ENA]
¢þ
>WENV182840783
OKHO01000011
[OKHO] human gut metagenome; human gut
116788
116703
-
Ser
TGA
[ENA]
¢þ
>WENV182840799
OKHO01000030
[OKHO] human gut metagenome; human gut
117386
117311
-
Val
TAC
[ENA]
¢þ
>WENV182840769
OKHO01000006
[OKHO] human gut metagenome; human gut
119566
119639
+
Gly
CCC
[ENA]
¢þ
>WENV182840763
OKHO01000005
[OKHO] human gut metagenome; human gut
123935
124011
+
Pro
GGG
[ENA]
¢þ
>WENV182840797
OKHO01000026
[OKHO] human gut metagenome; human gut
130595
130520
-
Lys
TTT
[ENA]
¢þ
>WENV182840796
OKHO01000026
[OKHO] human gut metagenome; human gut
130704
130629
-
Lys
TTT
[ENA]
¢þ
>WENV182840733
OKHO01000001
[OKHO] human gut metagenome; human gut
153418
153493
+
Gly
GCC
[ENA]
¢þ
>WENV182840734
OKHO01000001
[OKHO] human gut metagenome; human gut
153547
153620
+
Cys
GCA
[ENA]
¢þ
>WENV182840735
OKHO01000001
[OKHO] human gut metagenome; human gut
153633
153719
+
Leu
TAA
[ENA]
¢þ
>WENV182840781
OKHO01000009
[OKHO] human gut metagenome; human gut
165933
165859
-
His
GTG
[ENA]
¢þ
>WENV182840775
OKHO01000006
[OKHO] human gut metagenome; human gut
192579
192503
-
fMet
CAT
[ENA]
¢þ
>WENV182840774
OKHO01000006
[OKHO] human gut metagenome; human gut
192689
192613
-
fMet
CAT
[ENA]
¢þ
>WENV182840777
OKHO01000007
[OKHO] human gut metagenome; human gut
192722
192806
+
Tyr
GTA
[ENA]
¢þ
>WENV182840773
OKHO01000006
[OKHO] human gut metagenome; human gut
192799
192723
-
fMet
CAT
[ENA]
¢þ
>WENV182840778
OKHO01000007
[OKHO] human gut metagenome; human gut
192840
192924
+
Tyr
GTA
[ENA]
¢þ
>WENV182840762
OKHO01000004
[OKHO] human gut metagenome; human gut
214210
214135
-
Ile2
CAT
[ENA]
¢þ
>WENV182840779
OKHO01000008
[OKHO] human gut metagenome; human gut
232361
232437
+
Pro
CGG
[ENA]
¢þ
>WENV182840743
OKHO01000002
[OKHO] human gut metagenome; human gut
261316
261402
+
Leu
CAG
[ENA]
¢þ
>WENV182840744
OKHO01000002
[OKHO] human gut metagenome; human gut
261431
261517
+
Leu
CAG
[ENA]
¢þ
>WENV182840745
OKHO01000002
[OKHO] human gut metagenome; human gut
261552
261638
+
Leu
CAG
[ENA]
¢þ
>WENV182840764
OKHO01000005
[OKHO] human gut metagenome; human gut
295294
295368
+
Arg
CCT
[ENA]
¢þ
>WENV182840752
OKHO01000003
[OKHO] human gut metagenome; human gut
300356
300432
+
Arg
TCT
[ENA]
¢þ
>WENV182840770
OKHO01000006
[OKHO] human gut metagenome; human gut
313764
313856
+
Ser
GCT
[ENA]
¢þ
>WENV182840771
OKHO01000006
[OKHO] human gut metagenome; human gut
313860
313936
+
Arg
ACG
[ENA]
¢þ
>WENV182840772
OKHO01000006
[OKHO] human gut metagenome; human gut
314001
314077
+
Arg
ACG
[ENA]
¢þ
>WENV182840768
OKHO01000005
[OKHO] human gut metagenome; human gut
335534
335459
-
Ala
GGC
[ENA]
¢þ
>WENV182840767
OKHO01000005
[OKHO] human gut metagenome; human gut
335649
335574
-
Ala
GGC
[ENA]
¢þ
>WENV182840750
OKHO01000002
[OKHO] human gut metagenome; human gut
335909
335825
-
Leu
CAA
[ENA]
¢þ
>WENV182840765
OKHO01000005
[OKHO] human gut metagenome; human gut
338348
338423
+
Val
TAC
[ENA]
¢þ
>WENV182840766
OKHO01000005
[OKHO] human gut metagenome; human gut
338470
338545
+
Val
TAC
[ENA]
¢þ
>WENV182840736
OKHO01000001
[OKHO] human gut metagenome; human gut
352200
352274
+
Asn
GTT
[ENA]
¢þ
>WENV182840737
OKHO01000001
[OKHO] human gut metagenome; human gut
352280
352355
+
Thr
TGT
[ENA]
¢þ
>WENV182840759
OKHO01000003
[OKHO] human gut metagenome; human gut
402706
402632
-
Gln
CTG
[ENA]
¢þ
>WENV182840758
OKHO01000003
[OKHO] human gut metagenome; human gut
402818
402744
-
Gln
CTG
[ENA]
¢þ
>WENV182840757
OKHO01000003
[OKHO] human gut metagenome; human gut
402943
402867
-
Met
CAT
[ENA]
¢þ
>WENV182840756
OKHO01000003
[OKHO] human gut metagenome; human gut
403033
402959
-
Gln
TTG
[ENA]
¢þ
>WENV182840755
OKHO01000003
[OKHO] human gut metagenome; human gut
403142
403068
-
Gln
TTG
[ENA]
¢þ
>WENV182840754
OKHO01000003
[OKHO] human gut metagenome; human gut
403250
403166
-
Leu
TAG
[ENA]
¢þ
>WENV182840753
OKHO01000003
[OKHO] human gut metagenome; human gut
403335
403259
-
Met
CAT
[ENA]
¢þ
>WENV182840739
OKHO01000001
[OKHO] human gut metagenome; human gut
432409
432333
-
Val
GAC
[ENA]
¢þ
>WENV182840738
OKHO01000001
[OKHO] human gut metagenome; human gut
432490
432414
-
Val
GAC
[ENA]
¢þ
>WENV182840749
OKHO01000002
[OKHO] human gut metagenome; human gut
452421
452346
-
Gly
GCC
[ENA]
¢þ
>WENV182840748
OKHO01000002
[OKHO] human gut metagenome; human gut
452533
452458
-
Gly
GCC
[ENA]
¢þ
>WENV182840747
OKHO01000002
[OKHO] human gut metagenome; human gut
452645
452570
-
Gly
GCC
[ENA]
¢þ
>WENV182840746
OKHO01000002
[OKHO] human gut metagenome; human gut
484378
484453
+
Phe
GAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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