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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA gene List
[OKIY] human gut metagenome; human gut
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182844899
OKIY01000036
[OKIY] human gut metagenome; human gut
1
77
+
fMet
CAT
[ENA]
¢þ
>WENV182844983
OKIY01001644
[OKIY] human gut metagenome; human gut
55
127
+
Asp
GTC
[ENA]
¢þ
>WENV182844991
OKIY01001899
[OKIY] human gut metagenome; human gut
59
131
+
Val
TAC
[ENA]
¢þ
>WENV182844980
OKIY01001271
[OKIY] human gut metagenome; human gut
60
135
+
Lys
CTT
[ENA]
¢þ
>WENV182844911
OKIY01000066
[OKIY] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182844920
OKIY01000076
[OKIY] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182844937
OKIY01000134
[OKIY] human gut metagenome; human gut
67
141
+
Ala
TGC
[ENA]
¢þ
>WENV182844998
OKIY01001986
[OKIY] human gut metagenome; human gut
125
200
+
Phe
GAA
[ENA]
¢þ
>WENV182844982
OKIY01001521
[OKIY] human gut metagenome; human gut
128
217
+
Ser
GGA
[ENA]
¢þ
>WENV182844984
OKIY01001644
[OKIY] human gut metagenome; human gut
130
202
+
Lys
TTT
[ENA]
¢þ
>WENV182844992
OKIY01001899
[OKIY] human gut metagenome; human gut
136
208
+
Gly
TCC
[ENA]
¢þ
>WENV182844921
OKIY01000076
[OKIY] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182844904
OKIY01000051
[OKIY] human gut metagenome; human gut
150
58
-
Ser
GCT
[ENA]
¢þ
>WENV182844938
OKIY01000134
[OKIY] human gut metagenome; human gut
163
238
+
Met
CAT
[ENA]
¢þ
>WENV182844962
OKIY01000206
[OKIY] human gut metagenome; human gut
166
91
-
Lys
TTT
[ENA]
¢þ
>WENV182844999
OKIY01001986
[OKIY] human gut metagenome; human gut
206
279
+
Cys
GCA
[ENA]
¢þ
>WENV182844985
OKIY01001644
[OKIY] human gut metagenome; human gut
211
294
+
Leu
TAG
[ENA]
¢þ
>WENV182844974
OKIY01000512
[OKIY] human gut metagenome; human gut
214
287
+
Gln
TTG
[ENA]
¢þ
>WENV182844902
OKIY01000044
[OKIY] human gut metagenome; human gut
229
302
+
Gly
CCC
[ENA]
¢þ
>WENV182844922
OKIY01000076
[OKIY] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182844981
OKIY01001467
[OKIY] human gut metagenome; human gut
243
318
+
Arg
TCT
[ENA]
¢þ
>WENV182844993
OKIY01001899
[OKIY] human gut metagenome; human gut
243
319
+
Ile
GAT
[ENA]
¢þ
>WENV182844939
OKIY01000134
[OKIY] human gut metagenome; human gut
257
332
+
Ile2
CAT
[ENA]
¢þ
>WENV182844977
OKIY01000559
[OKIY] human gut metagenome; human gut
291
217
-
Asn
GTT
[ENA]
¢þ
>WENV182844975
OKIY01000512
[OKIY] human gut metagenome; human gut
294
368
+
Glu
TTC
[ENA]
¢þ
>WENV182844986
OKIY01001644
[OKIY] human gut metagenome; human gut
303
377
+
Thr
TGT
[ENA]
¢þ
>WENV182844979
OKIY01000964
[OKIY] human gut metagenome; human gut
317
246
-
Trp
CCA
[ENA]
¢þ
>WENV182844923
OKIY01000076
[OKIY] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¢þ
>WENV182844994
OKIY01001899
[OKIY] human gut metagenome; human gut
327
400
+
Glu
TTC
[ENA]
¢þ
>WENV182845001
OKIY01003088
[OKIY] human gut metagenome; human gut
348
258
-
Ser
GCT
[ENA]
¢þ
>WENV182844940
OKIY01000134
[OKIY] human gut metagenome; human gut
365
454
+
Ser
TGA
[ENA]
¢þ
>WENV182844924
OKIY01000076
[OKIY] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¢þ
>WENV182844987
OKIY01001644
[OKIY] human gut metagenome; human gut
410
481
+
Gly
GCC
[ENA]
¢þ
>WENV182844995
OKIY01001899
[OKIY] human gut metagenome; human gut
413
502
+
Ser
TGA
[ENA]
¢þ
>WENV182844976
OKIY01000530
[OKIY] human gut metagenome; human gut
437
355
-
Leu
CAA
[ENA]
¢þ
>WENV182845000
OKIY01003088
[OKIY] human gut metagenome; human gut
464
374
-
Ser
TGA
[ENA]
¢þ
>WENV182844941
OKIY01000134
[OKIY] human gut metagenome; human gut
487
562
+
fMet
CAT
[ENA]
¢þ
>WENV182844988
OKIY01001644
[OKIY] human gut metagenome; human gut
490
574
+
Leu
TAA
[ENA]
¢þ
>WENV182844925
OKIY01000076
[OKIY] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¢þ
>WENV182844996
OKIY01001899
[OKIY] human gut metagenome; human gut
512
587
+
fMet
CAT
[ENA]
¢þ
>WENV182844989
OKIY01001644
[OKIY] human gut metagenome; human gut
586
659
+
Arg
ACG
[ENA]
¢þ
>WENV182844997
OKIY01001899
[OKIY] human gut metagenome; human gut
589
661
+
Phe
GAA
[ENA]
¢þ
>WENV182844926
OKIY01000076
[OKIY] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¢þ
>WENV182844942
OKIY01000134
[OKIY] human gut metagenome; human gut
600
676
+
Asp
GTC
[ENA]
¢þ
>WENV182844964
OKIY01000231
[OKIY] human gut metagenome; human gut
613
543
-
Thr
GGT
[ENA]
¢þ
>WENV182844990
OKIY01001644
[OKIY] human gut metagenome; human gut
666
741
+
Pro
TGG
[ENA]
¢þ
>WENV182844943
OKIY01000134
[OKIY] human gut metagenome; human gut
678
748
+
Gly
TCC
[ENA]
¢þ
>WENV182844927
OKIY01000076
[OKIY] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¢þ
>WENV182844944
OKIY01000134
[OKIY] human gut metagenome; human gut
757
832
+
Ile
GAT
[ENA]
¢þ
>WENV182844961
OKIY01000191
[OKIY] human gut metagenome; human gut
826
755
-
Arg
CCG
[ENA]
¢þ
>WENV182844978
OKIY01000668
[OKIY] human gut metagenome; human gut
837
912
+
Thr
GGT
[ENA]
¢þ
>WENV182844945
OKIY01000134
[OKIY] human gut metagenome; human gut
845
918
+
Glu
TTC
[ENA]
¢þ
>WENV182844946
OKIY01000134
[OKIY] human gut metagenome; human gut
930
1019
+
Ser
TGA
[ENA]
¢þ
>WENV182844947
OKIY01000134
[OKIY] human gut metagenome; human gut
1052
1127
+
fMet
CAT
[ENA]
¢þ
>WENV182844948
OKIY01000134
[OKIY] human gut metagenome; human gut
1174
1249
+
Asp
GTC
[ENA]
¢þ
>WENV182844895
OKIY01000027
[OKIY] human gut metagenome; human gut
1226
1150
-
Arg
TCT
[ENA]
¢þ
>WENV182844949
OKIY01000134
[OKIY] human gut metagenome; human gut
1253
1330
+
Phe
GAA
[ENA]
¢þ
>WENV182844950
OKIY01000134
[OKIY] human gut metagenome; human gut
1341
1411
+
Gly
TCC
[ENA]
¢þ
>WENV182844951
OKIY01000134
[OKIY] human gut metagenome; human gut
1420
1495
+
Ile
GAT
[ENA]
¢þ
>WENV182844952
OKIY01000134
[OKIY] human gut metagenome; human gut
1504
1593
+
Ser
GCT
[ENA]
¢þ
>WENV182844953
OKIY01000134
[OKIY] human gut metagenome; human gut
1607
1680
+
Glu
TTC
[ENA]
¢þ
>WENV182844935
OKIY01000100
[OKIY] human gut metagenome; human gut
2226
2151
-
Thr
CGT
[ENA]
¢þ
>WENV182844960
OKIY01000191
[OKIY] human gut metagenome; human gut
2298
2227
-
Gln
TTG
[ENA]
¢þ
>WENV182844903
OKIY01000046
[OKIY] human gut metagenome; human gut
2360
2287
-
Lys
CTT
[ENA]
¢þ
>WENV182844959
OKIY01000191
[OKIY] human gut metagenome; human gut
2378
2304
-
His
GTG
[ENA]
¢þ
>WENV182844967
OKIY01000326
[OKIY] human gut metagenome; human gut
2381
2451
+
Cys
GCA
[ENA]
¢þ
>WENV182844958
OKIY01000191
[OKIY] human gut metagenome; human gut
2462
2392
-
Trp
CCA
[ENA]
¢þ
>WENV182844957
OKIY01000191
[OKIY] human gut metagenome; human gut
2549
2469
-
Tyr
GTA
[ENA]
¢þ
>WENV182844906
OKIY01000062
[OKIY] human gut metagenome; human gut
2754
2829
+
Ala
GGC
[ENA]
¢þ
>WENV182844907
OKIY01000062
[OKIY] human gut metagenome; human gut
2869
2944
+
Ala
GGC
[ENA]
¢þ
>WENV182844965
OKIY01000242
[OKIY] human gut metagenome; human gut
3305
3378
+
Asn
GTT
[ENA]
¢þ
>WENV182844905
OKIY01000060
[OKIY] human gut metagenome; human gut
3353
3278
-
Arg
TCT
[ENA]
¢þ
>WENV182844956
OKIY01000178
[OKIY] human gut metagenome; human gut
3424
3348
-
Asp
GTC
[ENA]
¢þ
>WENV182844963
OKIY01000212
[OKIY] human gut metagenome; human gut
3460
3547
+
Ser
GGA
[ENA]
¢þ
>WENV182844968
OKIY01000359
[OKIY] human gut metagenome; human gut
3508
3583
+
Thr
TGT
[ENA]
¢þ
>WENV182844969
OKIY01000359
[OKIY] human gut metagenome; human gut
3592
3676
+
Tyr
GTA
[ENA]
¢þ
>WENV182844972
OKIY01000388
[OKIY] human gut metagenome; human gut
3627
3701
+
Asn
GTT
[ENA]
¢þ
>WENV182844973
OKIY01000388
[OKIY] human gut metagenome; human gut
3708
3794
+
Leu
TAA
[ENA]
¢þ
>WENV182844970
OKIY01000359
[OKIY] human gut metagenome; human gut
3793
3867
+
Gly
TCC
[ENA]
¢þ
>WENV182844971
OKIY01000359
[OKIY] human gut metagenome; human gut
3874
3949
+
Thr
GGT
[ENA]
¢þ
>WENV182844966
OKIY01000324
[OKIY] human gut metagenome; human gut
4253
4182
-
Arg
CCT
[ENA]
¢þ
>WENV182844954
OKIY01000151
[OKIY] human gut metagenome; human gut
7552
7468
-
Tyr
GTA
[ENA]
¢þ
>WENV182844930
OKIY01000092
[OKIY] human gut metagenome; human gut
8412
8498
+
Leu
GAG
[ENA]
¢þ
>WENV182844955
OKIY01000167
[OKIY] human gut metagenome; human gut
10336
10408
+
Lys
CTT
[ENA]
¢þ
>WENV182844936
OKIY01000118
[OKIY] human gut metagenome; human gut
15443
15358
-
Leu
AAG
[ENA]
¢þ
>WENV182844931
OKIY01000092
[OKIY] human gut metagenome; human gut
19798
19880
+
Tyr
GTA
[ENA]
¢þ
>WENV182844932
OKIY01000092
[OKIY] human gut metagenome; human gut
19884
19957
+
Trp
CCA
[ENA]
¢þ
>WENV182844933
OKIY01000092
[OKIY] human gut metagenome; human gut
19994
20067
+
His
GTG
[ENA]
¢þ
>WENV182844934
OKIY01000092
[OKIY] human gut metagenome; human gut
20080
20153
+
Gln
TTG
[ENA]
¢þ
>WENV182844891
OKIY01000020
[OKIY] human gut metagenome; human gut
20101
20029
-
Thr
CGT
[ENA]
¢þ
>WENV182844928
OKIY01000085
[OKIY] human gut metagenome; human gut
20209
20134
-
Arg
CCT
[ENA]
¢þ
>WENV182844929
OKIY01000089
[OKIY] human gut metagenome; human gut
25330
25405
+
Phe
GAA
[ENA]
¢þ
>WENV182844919
OKIY01000071
[OKIY] human gut metagenome; human gut
27336
27410
+
Arg
CCT
[ENA]
¢þ
>WENV182844908
OKIY01000065
[OKIY] human gut metagenome; human gut
32165
32240
+
Ile2
CAT
[ENA]
¢þ
>WENV182844909
OKIY01000065
[OKIY] human gut metagenome; human gut
32248
32324
+
Arg
TCG
[ENA]
¢þ
>WENV182844910
OKIY01000065
[OKIY] human gut metagenome; human gut
32338
32414
+
Arg
TCT
[ENA]
¢þ
>WENV182844892
OKIY01000023
[OKIY] human gut metagenome; human gut
33226
33302
+
Val
GAC
[ENA]
¢þ
>WENV182844893
OKIY01000023
[OKIY] human gut metagenome; human gut
33307
33383
+
Val
GAC
[ENA]
¢þ
>WENV182844898
OKIY01000035
[OKIY] human gut metagenome; human gut
33689
33614
-
Ile2
CAT
[ENA]
¢þ
>WENV182844918
OKIY01000070
[OKIY] human gut metagenome; human gut
33987
33901
-
Leu
TAA
[ENA]
¢þ
>WENV182844917
OKIY01000070
[OKIY] human gut metagenome; human gut
34073
34000
-
Cys
GCA
[ENA]
¢þ
>WENV182844916
OKIY01000070
[OKIY] human gut metagenome; human gut
34202
34127
-
Gly
GCC
[ENA]
¢þ
>WENV182844912
OKIY01000066
[OKIY] human gut metagenome; human gut
34607
34683
+
Arg
CCG
[ENA]
¢þ
>WENV182844913
OKIY01000066
[OKIY] human gut metagenome; human gut
34742
34817
+
His
GTG
[ENA]
¢þ
>WENV182844914
OKIY01000066
[OKIY] human gut metagenome; human gut
34838
34924
+
Leu
CAG
[ENA]
¢þ
>WENV182844915
OKIY01000066
[OKIY] human gut metagenome; human gut
34967
35043
+
Pro
TGG
[ENA]
¢þ
>WENV182844896
OKIY01000028
[OKIY] human gut metagenome; human gut
43822
43894
+
Thr
GGT
[ENA]
¢þ
>WENV182844887
OKIY01000014
[OKIY] human gut metagenome; human gut
49327
49413
+
Leu
CAG
[ENA]
¢þ
>WENV182844888
OKIY01000014
[OKIY] human gut metagenome; human gut
49442
49528
+
Leu
CAG
[ENA]
¢þ
>WENV182844867
OKIY01000001
[OKIY] human gut metagenome; human gut
51856
51943
+
Ser
TGA
[ENA]
¢þ
>WENV182844897
OKIY01000033
[OKIY] human gut metagenome; human gut
57591
57680
+
Ser
CGA
[ENA]
¢þ
>WENV182844901
OKIY01000040
[OKIY] human gut metagenome; human gut
58074
57998
-
Arg
ACG
[ENA]
¢þ
>WENV182844900
OKIY01000040
[OKIY] human gut metagenome; human gut
58213
58137
-
Arg
ACG
[ENA]
¢þ
>WENV182844894
OKIY01000026
[OKIY] human gut metagenome; human gut
58799
58872
+
Arg
CCG
[ENA]
¢þ
>WENV182844890
OKIY01000018
[OKIY] human gut metagenome; human gut
60170
60246
+
Pro
CGG
[ENA]
¢þ
>WENV182844886
OKIY01000012
[OKIY] human gut metagenome; human gut
66451
66376
-
Asn
GTT
[ENA]
¢þ
>WENV182844883
OKIY01000012
[OKIY] human gut metagenome; human gut
68200
68275
+
Asn
GTT
[ENA]
¢þ
>WENV182844873
OKIY01000003
[OKIY] human gut metagenome; human gut
69598
69523
-
Phe
GAA
[ENA]
¢þ
>WENV182844869
OKIY01000003
[OKIY] human gut metagenome; human gut
98464
98539
+
Gly
GCC
[ENA]
¢þ
>WENV182844870
OKIY01000003
[OKIY] human gut metagenome; human gut
98576
98651
+
Gly
GCC
[ENA]
¢þ
>WENV182844871
OKIY01000003
[OKIY] human gut metagenome; human gut
98688
98763
+
Gly
GCC
[ENA]
¢þ
>WENV182844889
OKIY01000017
[OKIY] human gut metagenome; human gut
99295
99381
+
Leu
GAG
[ENA]
¢þ
>WENV182844880
OKIY01000005
[OKIY] human gut metagenome; human gut
100574
100500
-
Gln
CTG
[ENA]
¢þ
>WENV182844879
OKIY01000005
[OKIY] human gut metagenome; human gut
100686
100612
-
Gln
CTG
[ENA]
¢þ
>WENV182844878
OKIY01000005
[OKIY] human gut metagenome; human gut
100811
100735
-
Met
CAT
[ENA]
¢þ
>WENV182844877
OKIY01000005
[OKIY] human gut metagenome; human gut
100901
100827
-
Gln
TTG
[ENA]
¢þ
>WENV182844876
OKIY01000005
[OKIY] human gut metagenome; human gut
101010
100936
-
Gln
TTG
[ENA]
¢þ
>WENV182844875
OKIY01000005
[OKIY] human gut metagenome; human gut
101118
101034
-
Leu
TAG
[ENA]
¢þ
>WENV182844874
OKIY01000005
[OKIY] human gut metagenome; human gut
101205
101129
-
Met
CAT
[ENA]
¢þ
>WENV182844885
OKIY01000012
[OKIY] human gut metagenome; human gut
110574
110499
-
Asn
GTT
[ENA]
¢þ
>WENV182844884
OKIY01000012
[OKIY] human gut metagenome; human gut
111566
111655
+
Ser
CGA
[ENA]
¢þ
>WENV182844882
OKIY01000007
[OKIY] human gut metagenome; human gut
119142
119048
-
SeC
TCA
[ENA]
¢þ
>WENV182844881
OKIY01000006
[OKIY] human gut metagenome; human gut
124785
124709
-
Pro
GGG
[ENA]
¢þ
>WENV182844868
OKIY01000001
[OKIY] human gut metagenome; human gut
147244
147331
+
Ser
GGA
[ENA]
¢þ
>WENV182844872
OKIY01000003
[OKIY] human gut metagenome; human gut
208336
208420
+
Leu
CAA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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