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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OKJC] human gut metagenome; human gut
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182845400
OKJC01000225
[OKJC] human gut metagenome; human gut
74
1
-
Pro
TGG
[ENA]
¢þ
>WENV182845348
OKJC01000038
[OKJC] human gut metagenome; human gut
105
181
+
Asp
GTC
[ENA]
¢þ
>WENV182845344
OKJC01000036
[OKJC] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182845399
OKJC01000225
[OKJC] human gut metagenome; human gut
177
101
-
Arg
ACG
[ENA]
¢þ
>WENV182845349
OKJC01000038
[OKJC] human gut metagenome; human gut
234
309
+
Trp
CCA
[ENA]
¢þ
>WENV182845398
OKJC01000225
[OKJC] human gut metagenome; human gut
278
190
-
Leu
TAA
[ENA]
¢þ
>WENV182845405
OKJC01001023
[OKJC] human gut metagenome; human gut
278
205
-
Cys
GCA
[ENA]
¢þ
>WENV182845404
OKJC01001023
[OKJC] human gut metagenome; human gut
355
284
-
Gln
TTG
[ENA]
¢þ
>WENV182845359
OKJC01000062
[OKJC] human gut metagenome; human gut
359
272
-
Ser
GCT
[ENA]
¢þ
>WENV182845323
OKJC01000009
[OKJC] human gut metagenome; human gut
361
270
-
Ser
GGA
[ENA]
¢þ
>WENV182845397
OKJC01000225
[OKJC] human gut metagenome; human gut
364
290
-
Gly
GCC
[ENA]
¢þ
>WENV182845403
OKJC01001023
[OKJC] human gut metagenome; human gut
439
366
-
His
GTG
[ENA]
¢þ
>WENV182845396
OKJC01000225
[OKJC] human gut metagenome; human gut
450
368
-
Leu
TAG
[ENA]
¢þ
>WENV182845402
OKJC01001023
[OKJC] human gut metagenome; human gut
526
452
-
Phe
GAA
[ENA]
¢þ
>WENV182845395
OKJC01000225
[OKJC] human gut metagenome; human gut
534
459
-
Lys
TTT
[ENA]
¢þ
>WENV182845322
OKJC01000009
[OKJC] human gut metagenome; human gut
584
498
-
Ser
TGA
[ENA]
¢þ
>WENV182845401
OKJC01000791
[OKJC] human gut metagenome; human gut
608
683
+
Trp
CCA
[ENA]
¢þ
>WENV182845394
OKJC01000225
[OKJC] human gut metagenome; human gut
616
541
-
Thr
TGT
[ENA]
¢þ
>WENV182845393
OKJC01000225
[OKJC] human gut metagenome; human gut
698
623
-
Val
TAC
[ENA]
¢þ
>WENV182845385
OKJC01000137
[OKJC] human gut metagenome; human gut
915
840
-
Phe
GAA
[ENA]
¢þ
>WENV182845331
OKJC01000023
[OKJC] human gut metagenome; human gut
1524
1430
-
SeC
TCA
[ENA]
¢þ
>WENV182845381
OKJC01000116
[OKJC] human gut metagenome; human gut
3508
3583
+
Lys
TTT
[ENA]
¢þ
>WENV182845392
OKJC01000225
[OKJC] human gut metagenome; human gut
4075
3999
-
Ile
GAT
[ENA]
¢þ
>WENV182845389
OKJC01000212
[OKJC] human gut metagenome; human gut
5577
5505
-
Trp
CCA
[ENA]
¢þ
>WENV182845391
OKJC01000221
[OKJC] human gut metagenome; human gut
6116
6040
-
Arg
ACG
[ENA]
¢þ
>WENV182845390
OKJC01000221
[OKJC] human gut metagenome; human gut
6354
6278
-
Arg
ACG
[ENA]
¢þ
>WENV182845386
OKJC01000158
[OKJC] human gut metagenome; human gut
7455
7539
+
Leu
CAA
[ENA]
¢þ
>WENV182845332
OKJC01000026
[OKJC] human gut metagenome; human gut
8455
8530
+
Asn
GTT
[ENA]
¢þ
>WENV182845370
OKJC01000077
[OKJC] human gut metagenome; human gut
8689
8765
+
Val
GAC
[ENA]
¢þ
>WENV182845371
OKJC01000077
[OKJC] human gut metagenome; human gut
8770
8846
+
Val
GAC
[ENA]
¢þ
>WENV182845384
OKJC01000127
[OKJC] human gut metagenome; human gut
9056
8983
-
Asn
GTT
[ENA]
¢þ
>WENV182845383
OKJC01000127
[OKJC] human gut metagenome; human gut
9166
9094
-
Ala
TGC
[ENA]
¢þ
>WENV182845388
OKJC01000168
[OKJC] human gut metagenome; human gut
10235
10148
-
Ser
GGA
[ENA]
¢þ
>WENV182845333
OKJC01000026
[OKJC] human gut metagenome; human gut
10915
10990
+
Asn
GTT
[ENA]
¢þ
>WENV182845343
OKJC01000035
[OKJC] human gut metagenome; human gut
11854
11928
+
Arg
ACG
[ENA]
¢þ
>WENV182845387
OKJC01000168
[OKJC] human gut metagenome; human gut
13159
13072
-
Ser
GGA
[ENA]
¢þ
>WENV182845374
OKJC01000104
[OKJC] human gut metagenome; human gut
13165
13079
-
Leu
TAA
[ENA]
¢þ
>WENV182845373
OKJC01000104
[OKJC] human gut metagenome; human gut
13250
13177
-
Cys
GCA
[ENA]
¢þ
>WENV182845372
OKJC01000104
[OKJC] human gut metagenome; human gut
13377
13302
-
Gly
GCC
[ENA]
¢þ
>WENV182845339
OKJC01000030
[OKJC] human gut metagenome; human gut
15518
15593
+
Gly
GCC
[ENA]
¢þ
>WENV182845382
OKJC01000126
[OKJC] human gut metagenome; human gut
15627
15714
+
Ser
TGA
[ENA]
¢þ
>WENV182845340
OKJC01000030
[OKJC] human gut metagenome; human gut
15639
15714
+
Gly
GCC
[ENA]
¢þ
>WENV182845341
OKJC01000030
[OKJC] human gut metagenome; human gut
15760
15835
+
Gly
GCC
[ENA]
¢þ
>WENV182845376
OKJC01000114
[OKJC] human gut metagenome; human gut
17300
17376
+
Pro
TGG
[ENA]
¢þ
>WENV182845365
OKJC01000064
[OKJC] human gut metagenome; human gut
19076
19162
+
Leu
CAG
[ENA]
¢þ
>WENV182845375
OKJC01000113
[OKJC] human gut metagenome; human gut
21036
21111
+
Thr
CGT
[ENA]
¢þ
>WENV182845357
OKJC01000061
[OKJC] human gut metagenome; human gut
21163
21239
+
Arg
TCT
[ENA]
¢þ
>WENV182845368
OKJC01000075
[OKJC] human gut metagenome; human gut
21871
21955
+
Tyr
GTA
[ENA]
¢þ
>WENV182845369
OKJC01000076
[OKJC] human gut metagenome; human gut
22041
22117
+
fMet
CAT
[ENA]
¢þ
>WENV182845351
OKJC01000040
[OKJC] human gut metagenome; human gut
23344
23416
+
Arg
CCT
[ENA]
¢þ
>WENV182845337
OKJC01000026
[OKJC] human gut metagenome; human gut
24707
24632
-
Asn
GTT
[ENA]
¢þ
>WENV182845377
OKJC01000114
[OKJC] human gut metagenome; human gut
25013
25088
+
Thr
TGT
[ENA]
¢þ
>WENV182845378
OKJC01000114
[OKJC] human gut metagenome; human gut
25097
25181
+
Tyr
GTA
[ENA]
¢þ
>WENV182845379
OKJC01000114
[OKJC] human gut metagenome; human gut
25298
25372
+
Gly
TCC
[ENA]
¢þ
>WENV182845321
OKJC01000009
[OKJC] human gut metagenome; human gut
25325
25254
-
Gln
CTG
[ENA]
¢þ
>WENV182845380
OKJC01000114
[OKJC] human gut metagenome; human gut
25379
25454
+
Thr
GGT
[ENA]
¢þ
>WENV182845302
OKJC01000005
[OKJC] human gut metagenome; human gut
25661
25745
+
Leu
CAG
[ENA]
¢þ
>WENV182845334
OKJC01000026
[OKJC] human gut metagenome; human gut
26456
26531
+
Asn
GTT
[ENA]
¢þ
>WENV182845347
OKJC01000037
[OKJC] human gut metagenome; human gut
29888
29814
-
Gln
CTG
[ENA]
¢þ
>WENV182845346
OKJC01000037
[OKJC] human gut metagenome; human gut
29997
29923
-
Gln
CTG
[ENA]
¢þ
>WENV182845345
OKJC01000037
[OKJC] human gut metagenome; human gut
30115
30039
-
Met
CAT
[ENA]
¢þ
>WENV182845358
OKJC01000062
[OKJC] human gut metagenome; human gut
30411
30338
-
Arg
CCT
[ENA]
¢þ
>WENV182845342
OKJC01000034
[OKJC] human gut metagenome; human gut
36710
36635
-
Ile2
CAT
[ENA]
¢þ
>WENV182845356
OKJC01000042
[OKJC] human gut metagenome; human gut
38506
38424
-
Leu
CAA
[ENA]
¢þ
>WENV182845367
OKJC01000074
[OKJC] human gut metagenome; human gut
38816
38742
-
Pro
CGG
[ENA]
¢þ
>WENV182845366
OKJC01000074
[OKJC] human gut metagenome; human gut
38917
38847
-
Gln
CTG
[ENA]
¢þ
>WENV182845350
OKJC01000039
[OKJC] human gut metagenome; human gut
41582
41655
+
Arg
CCG
[ENA]
¢þ
>WENV182845355
OKJC01000040
[OKJC] human gut metagenome; human gut
41638
41563
-
Ala
GGC
[ENA]
¢þ
>WENV182845354
OKJC01000040
[OKJC] human gut metagenome; human gut
41755
41680
-
Ala
GGC
[ENA]
¢þ
>WENV182845328
OKJC01000021
[OKJC] human gut metagenome; human gut
42926
42851
-
Phe
GAA
[ENA]
¢þ
>WENV182845364
OKJC01000063
[OKJC] human gut metagenome; human gut
43674
43602
-
Lys
TTT
[ENA]
¢þ
>WENV182845363
OKJC01000063
[OKJC] human gut metagenome; human gut
43783
43709
-
Phe
GAA
[ENA]
¢þ
>WENV182845362
OKJC01000063
[OKJC] human gut metagenome; human gut
43877
43802
-
fMet
CAT
[ENA]
¢þ
>WENV182845361
OKJC01000063
[OKJC] human gut metagenome; human gut
43974
43902
-
Thr
TGT
[ENA]
¢þ
>WENV182845360
OKJC01000063
[OKJC] human gut metagenome; human gut
44085
44004
-
Tyr
GTA
[ENA]
¢þ
>WENV182845352
OKJC01000040
[OKJC] human gut metagenome; human gut
44450
44525
+
Val
TAC
[ENA]
¢þ
>WENV182845353
OKJC01000040
[OKJC] human gut metagenome; human gut
44530
44605
+
Lys
TTT
[ENA]
¢þ
>WENV182845303
OKJC01000005
[OKJC] human gut metagenome; human gut
45552
45480
-
Glu
CTC
[ENA]
¢þ
>WENV182845320
OKJC01000009
[OKJC] human gut metagenome; human gut
50788
50716
-
Cys
GCA
[ENA]
¢þ
>WENV182845319
OKJC01000009
[OKJC] human gut metagenome; human gut
50887
50816
-
Glu
TTC
[ENA]
¢þ
>WENV182845326
OKJC01000013
[OKJC] human gut metagenome; human gut
55884
55970
+
Leu
GAG
[ENA]
¢þ
>WENV182845336
OKJC01000026
[OKJC] human gut metagenome; human gut
55935
55861
-
Thr
TGT
[ENA]
¢þ
>WENV182845335
OKJC01000026
[OKJC] human gut metagenome; human gut
56015
55941
-
Asn
GTT
[ENA]
¢þ
>WENV182845304
OKJC01000007
[OKJC] human gut metagenome; human gut
56716
56800
+
Leu
AAG
[ENA]
¢þ
>WENV182845327
OKJC01000013
[OKJC] human gut metagenome; human gut
57757
57833
+
fMet
CAT
[ENA]
¢þ
>WENV182845310
OKJC01000007
[OKJC] human gut metagenome; human gut
57795
57711
-
Leu
AAG
[ENA]
¢þ
>WENV182845318
OKJC01000009
[OKJC] human gut metagenome; human gut
62317
62244
-
Lys
CTT
[ENA]
¢þ
>WENV182845324
OKJC01000011
[OKJC] human gut metagenome; human gut
70758
70685
-
Gly
CCC
[ENA]
¢þ
>WENV182845338
OKJC01000028
[OKJC] human gut metagenome; human gut
75297
75209
-
Leu
TAA
[ENA]
¢þ
>WENV182845329
OKJC01000023
[OKJC] human gut metagenome; human gut
81510
81586
+
Arg
CCG
[ENA]
¢þ
>WENV182845330
OKJC01000023
[OKJC] human gut metagenome; human gut
81654
81729
+
His
GTG
[ENA]
¢þ
>WENV182845300
OKJC01000004
[OKJC] human gut metagenome; human gut
90204
90276
+
Thr
CGT
[ENA]
¢þ
>WENV182845309
OKJC01000007
[OKJC] human gut metagenome; human gut
94597
94523
-
Thr
GGT
[ENA]
¢þ
>WENV182845308
OKJC01000007
[OKJC] human gut metagenome; human gut
101325
101251
-
Met
CAT
[ENA]
¢þ
>WENV182845307
OKJC01000007
[OKJC] human gut metagenome; human gut
101412
101338
-
Val
TAC
[ENA]
¢þ
>WENV182845306
OKJC01000007
[OKJC] human gut metagenome; human gut
104173
104099
-
Met
CAT
[ENA]
¢þ
>WENV182845305
OKJC01000007
[OKJC] human gut metagenome; human gut
104260
104186
-
Val
TAC
[ENA]
¢þ
>WENV182845325
OKJC01000012
[OKJC] human gut metagenome; human gut
106127
106203
+
Pro
GGG
[ENA]
¢þ
>WENV182845317
OKJC01000009
[OKJC] human gut metagenome; human gut
109005
108923
-
Leu
TAG
[ENA]
¢þ
>WENV182845316
OKJC01000009
[OKJC] human gut metagenome; human gut
109126
109054
-
Lys
TTT
[ENA]
¢þ
>WENV182845315
OKJC01000009
[OKJC] human gut metagenome; human gut
109232
109161
-
Gln
TTG
[ENA]
¢þ
>WENV182845314
OKJC01000009
[OKJC] human gut metagenome; human gut
109359
109285
-
His
GTG
[ENA]
¢þ
>WENV182845313
OKJC01000009
[OKJC] human gut metagenome; human gut
109439
109364
-
Arg
TCT
[ENA]
¢þ
>WENV182845312
OKJC01000009
[OKJC] human gut metagenome; human gut
109560
109490
-
Gly
TCC
[ENA]
¢þ
>WENV182845311
OKJC01000009
[OKJC] human gut metagenome; human gut
109639
109564
-
Pro
TGG
[ENA]
¢þ
>WENV182845301
OKJC01000004
[OKJC] human gut metagenome; human gut
131732
131805
+
Gly
GCC
[ENA]
¢þ
>WENV182845299
OKJC01000002
[OKJC] human gut metagenome; human gut
187777
187703
-
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK