This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKJF] human gut metagenome; human gut
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182845760
OKJF01000083
[OKJF] human gut metagenome; human gut
63
138
+
Trp
CCA
[ENA]
¢þ
>WENV182845784
OKJF01001217
[OKJF] human gut metagenome; human gut
141
68
-
Glu
TTC
[ENA]
¢þ
>WENV182845783
OKJF01001217
[OKJF] human gut metagenome; human gut
229
154
-
Ile
GAT
[ENA]
¢þ
>WENV182845782
OKJF01001217
[OKJF] human gut metagenome; human gut
308
238
-
Gly
TCC
[ENA]
¢þ
>WENV182845785
OKJF01001679
[OKJF] human gut metagenome; human gut
356
281
-
Ile2
CAT
[ENA]
¢þ
>WENV182845755
OKJF01000070
[OKJF] human gut metagenome; human gut
378
303
-
Phe
GAA
[ENA]
¢þ
>WENV182845781
OKJF01001217
[OKJF] human gut metagenome; human gut
386
310
-
Asp
GTC
[ENA]
¢þ
>WENV182845780
OKJF01001217
[OKJF] human gut metagenome; human gut
499
424
-
fMet
CAT
[ENA]
¢þ
>WENV182845779
OKJF01001217
[OKJF] human gut metagenome; human gut
621
532
-
Ser
TGA
[ENA]
¢þ
>WENV182845778
OKJF01001077
[OKJF] human gut metagenome; human gut
687
759
+
Asn
GTT
[ENA]
¢þ
>WENV182845759
OKJF01000079
[OKJF] human gut metagenome; human gut
2136
2049
-
Ser
GGA
[ENA]
¢þ
>WENV182845777
OKJF01000169
[OKJF] human gut metagenome; human gut
2214
2140
-
Ala
TGC
[ENA]
¢þ
>WENV182845776
OKJF01000169
[OKJF] human gut metagenome; human gut
2300
2227
-
Pro
TGG
[ENA]
¢þ
>WENV182845775
OKJF01000169
[OKJF] human gut metagenome; human gut
2463
2390
-
Arg
ACG
[ENA]
¢þ
>WENV182845774
OKJF01000169
[OKJF] human gut metagenome; human gut
2563
2478
-
Leu
TAA
[ENA]
¢þ
>WENV182845773
OKJF01000169
[OKJF] human gut metagenome; human gut
2650
2579
-
Gly
GCC
[ENA]
¢þ
>WENV182845772
OKJF01000169
[OKJF] human gut metagenome; human gut
2730
2655
-
Thr
TGT
[ENA]
¢þ
>WENV182845754
OKJF01000069
[OKJF] human gut metagenome; human gut
2754
2829
+
Ala
GGC
[ENA]
¢þ
>WENV182845771
OKJF01000169
[OKJF] human gut metagenome; human gut
2819
2736
-
Leu
TAG
[ENA]
¢þ
>WENV182845770
OKJF01000169
[OKJF] human gut metagenome; human gut
2908
2834
-
Lys
TTT
[ENA]
¢þ
>WENV182845769
OKJF01000169
[OKJF] human gut metagenome; human gut
2987
2913
-
Val
TAC
[ENA]
¢þ
>WENV182845765
OKJF01000166
[OKJF] human gut metagenome; human gut
3508
3583
+
Thr
TGT
[ENA]
¢þ
>WENV182845766
OKJF01000166
[OKJF] human gut metagenome; human gut
3592
3676
+
Tyr
GTA
[ENA]
¢þ
>WENV182845767
OKJF01000166
[OKJF] human gut metagenome; human gut
3793
3867
+
Gly
TCC
[ENA]
¢þ
>WENV182845768
OKJF01000166
[OKJF] human gut metagenome; human gut
3874
3949
+
Thr
GGT
[ENA]
¢þ
>WENV182845736
OKJF01000038
[OKJF] human gut metagenome; human gut
3922
3836
-
Leu
GAG
[ENA]
¢þ
>WENV182845753
OKJF01000063
[OKJF] human gut metagenome; human gut
4068
3982
-
Leu
GAG
[ENA]
¢þ
>WENV182845758
OKJF01000078
[OKJF] human gut metagenome; human gut
4556
4462
-
SeC
TCA
[ENA]
¢þ
>WENV182845763
OKJF01000108
[OKJF] human gut metagenome; human gut
4839
4926
+
Ser
GGA
[ENA]
¢þ
>WENV182845764
OKJF01000127
[OKJF] human gut metagenome; human gut
8194
8270
+
Asp
GTC
[ENA]
¢þ
>WENV182845762
OKJF01000102
[OKJF] human gut metagenome; human gut
13225
13301
+
Arg
TCT
[ENA]
¢þ
>WENV182845747
OKJF01000050
[OKJF] human gut metagenome; human gut
15787
15862
+
Thr
CGT
[ENA]
¢þ
>WENV182845721
OKJF01000013
[OKJF] human gut metagenome; human gut
17308
17232
-
fMet
CAT
[ENA]
¢þ
>WENV182845720
OKJF01000013
[OKJF] human gut metagenome; human gut
17420
17344
-
fMet
CAT
[ENA]
¢þ
>WENV182845719
OKJF01000013
[OKJF] human gut metagenome; human gut
17532
17456
-
fMet
CAT
[ENA]
¢þ
>WENV182845734
OKJF01000030
[OKJF] human gut metagenome; human gut
21149
21225
+
Pro
CGG
[ENA]
¢þ
>WENV182845711
OKJF01000001
[OKJF] human gut metagenome; human gut
23346
23260
-
Leu
TAA
[ENA]
¢þ
>WENV182845710
OKJF01000001
[OKJF] human gut metagenome; human gut
23433
23360
-
Cys
GCA
[ENA]
¢þ
>WENV182845709
OKJF01000001
[OKJF] human gut metagenome; human gut
23549
23474
-
Gly
GCC
[ENA]
¢þ
>WENV182845761
OKJF01000094
[OKJF] human gut metagenome; human gut
23555
23630
+
Thr
CGT
[ENA]
¢þ
>WENV182845729
OKJF01000019
[OKJF] human gut metagenome; human gut
24955
24880
-
Thr
TGT
[ENA]
¢þ
>WENV182845737
OKJF01000039
[OKJF] human gut metagenome; human gut
28919
28994
+
Phe
GAA
[ENA]
¢þ
>WENV182845757
OKJF01000075
[OKJF] human gut metagenome; human gut
30836
30761
-
Asn
GTT
[ENA]
¢þ
>WENV182845713
OKJF01000005
[OKJF] human gut metagenome; human gut
31481
31405
-
Arg
TCT
[ENA]
¢þ
>WENV182845756
OKJF01000075
[OKJF] human gut metagenome; human gut
31828
31917
+
Ser
CGA
[ENA]
¢þ
>WENV182845722
OKJF01000014
[OKJF] human gut metagenome; human gut
32002
32077
+
Phe
GAA
[ENA]
¢þ
>WENV182845745
OKJF01000049
[OKJF] human gut metagenome; human gut
33244
33320
+
Val
GAC
[ENA]
¢þ
>WENV182845746
OKJF01000049
[OKJF] human gut metagenome; human gut
33325
33401
+
Val
GAC
[ENA]
¢þ
>WENV182845752
OKJF01000055
[OKJF] human gut metagenome; human gut
39641
39714
+
Gly
CCC
[ENA]
¢þ
>WENV182845728
OKJF01000018
[OKJF] human gut metagenome; human gut
44687
44611
-
Arg
ACG
[ENA]
¢þ
>WENV182845708
OKJF01000001
[OKJF] human gut metagenome; human gut
44750
44661
-
Ser
CGA
[ENA]
¢þ
>WENV182845727
OKJF01000018
[OKJF] human gut metagenome; human gut
44826
44750
-
Arg
ACG
[ENA]
¢þ
>WENV182845726
OKJF01000018
[OKJF] human gut metagenome; human gut
44965
44889
-
Arg
ACG
[ENA]
¢þ
>WENV182845725
OKJF01000018
[OKJF] human gut metagenome; human gut
45062
44970
-
Ser
GCT
[ENA]
¢þ
>WENV182845702
OKJF01000001
[OKJF] human gut metagenome; human gut
45742
45817
+
Asn
GTT
[ENA]
¢þ
>WENV182845743
OKJF01000046
[OKJF] human gut metagenome; human gut
47837
47761
-
Pro
TGG
[ENA]
¢þ
>WENV182845742
OKJF01000046
[OKJF] human gut metagenome; human gut
47966
47880
-
Leu
CAG
[ENA]
¢þ
>WENV182845741
OKJF01000046
[OKJF] human gut metagenome; human gut
48065
47990
-
His
GTG
[ENA]
¢þ
>WENV182845740
OKJF01000046
[OKJF] human gut metagenome; human gut
48197
48121
-
Arg
CCG
[ENA]
¢þ
>WENV182845735
OKJF01000031
[OKJF] human gut metagenome; human gut
50268
50355
+
Ser
TGA
[ENA]
¢þ
>WENV182845717
OKJF01000010
[OKJF] human gut metagenome; human gut
51394
51319
-
Ile2
CAT
[ENA]
¢þ
>WENV182845724
OKJF01000016
[OKJF] human gut metagenome; human gut
56238
56154
-
Leu
CAA
[ENA]
¢þ
>WENV182845733
OKJF01000029
[OKJF] human gut metagenome; human gut
59789
59873
+
Leu
CAA
[ENA]
¢þ
>WENV182845703
OKJF01000001
[OKJF] human gut metagenome; human gut
64268
64343
+
Asn
GTT
[ENA]
¢þ
>WENV182845751
OKJF01000052
[OKJF] human gut metagenome; human gut
65816
65741
-
Asn
GTT
[ENA]
¢þ
>WENV182845749
OKJF01000052
[OKJF] human gut metagenome; human gut
67565
67640
+
Asn
GTT
[ENA]
¢þ
>WENV182845738
OKJF01000040
[OKJF] human gut metagenome; human gut
69724
69811
+
Ser
TGA
[ENA]
¢þ
>WENV182845750
OKJF01000052
[OKJF] human gut metagenome; human gut
69974
70049
+
Asn
GTT
[ENA]
¢þ
>WENV182845748
OKJF01000050
[OKJF] human gut metagenome; human gut
71778
71702
-
Asp
GTC
[ENA]
¢þ
>WENV182845716
OKJF01000008
[OKJF] human gut metagenome; human gut
72455
72382
-
Gly
CCC
[ENA]
¢þ
>WENV182845731
OKJF01000022
[OKJF] human gut metagenome; human gut
83252
83328
+
Pro
CGG
[ENA]
¢þ
>WENV182845707
OKJF01000001
[OKJF] human gut metagenome; human gut
84477
84402
-
Asn
GTT
[ENA]
¢þ
>WENV182845744
OKJF01000047
[OKJF] human gut metagenome; human gut
84908
84832
-
Val
GAC
[ENA]
¢þ
>WENV182845704
OKJF01000001
[OKJF] human gut metagenome; human gut
86236
86311
+
Asn
GTT
[ENA]
¢þ
>WENV182845739
OKJF01000046
[OKJF] human gut metagenome; human gut
86301
86226
-
Trp
CCA
[ENA]
¢þ
>WENV182845723
OKJF01000014
[OKJF] human gut metagenome; human gut
98145
98220
+
Ile2
CAT
[ENA]
¢þ
>WENV182845732
OKJF01000024
[OKJF] human gut metagenome; human gut
109276
109370
+
SeC
TCA
[ENA]
¢þ
>WENV182845714
OKJF01000007
[OKJF] human gut metagenome; human gut
131793
131877
+
Tyr
GTA
[ENA]
¢þ
>WENV182845730
OKJF01000021
[OKJF] human gut metagenome; human gut
146622
146696
+
Arg
CCT
[ENA]
¢þ
>WENV182845718
OKJF01000011
[OKJF] human gut metagenome; human gut
164968
165044
+
Pro
GGG
[ENA]
¢þ
>WENV182845712
OKJF01000004
[OKJF] human gut metagenome; human gut
167910
167986
+
Arg
TCT
[ENA]
¢þ
>WENV182845715
OKJF01000008
[OKJF] human gut metagenome; human gut
182475
182550
+
Phe
GAA
[ENA]
¢þ
>WENV182845705
OKJF01000001
[OKJF] human gut metagenome; human gut
319544
319620
+
Pro
GGG
[ENA]
¢þ
>WENV182845706
OKJF01000001
[OKJF] human gut metagenome; human gut
446692
446766
+
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK