This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKJJ] human gut metagenome; human gut
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846168
OKJJ01000807
[OKJJ] human gut metagenome; human gut
2
76
+
Glu
TTC
[ENA]
¢þ
>WENV182846159
OKJJ01000557
[OKJJ] human gut metagenome; human gut
31
104
+
Trp
CCA
[ENA]
¢þ
>WENV182846162
OKJJ01000619
[OKJJ] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182846086
OKJJ01000019
[OKJJ] human gut metagenome; human gut
76
152
+
Val
GAC
[ENA]
¢þ
>WENV182846124
OKJJ01000084
[OKJJ] human gut metagenome; human gut
81
155
+
Val
TAC
[ENA]
¢þ
>WENV182846169
OKJJ01000807
[OKJJ] human gut metagenome; human gut
84
159
+
Val
TAC
[ENA]
¢þ
>WENV182846138
OKJJ01000130
[OKJJ] human gut metagenome; human gut
99
174
+
Lys
CTT
[ENA]
¢þ
>WENV182846113
OKJJ01000047
[OKJJ] human gut metagenome; human gut
103
178
+
Trp
CCA
[ENA]
¢þ
>WENV182846153
OKJJ01000324
[OKJJ] human gut metagenome; human gut
104
179
+
Trp
CCA
[ENA]
¢þ
>WENV182846160
OKJJ01000557
[OKJJ] human gut metagenome; human gut
107
182
+
His
GTG
[ENA]
¢þ
>WENV182846101
OKJJ01000025
[OKJJ] human gut metagenome; human gut
140
216
+
Asp
GTC
[ENA]
¢þ
>WENV182846163
OKJJ01000619
[OKJJ] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182846125
OKJJ01000084
[OKJJ] human gut metagenome; human gut
165
240
+
Asp
GTC
[ENA]
¢þ
>WENV182846170
OKJJ01000807
[OKJJ] human gut metagenome; human gut
173
249
+
Asp
GTC
[ENA]
¢þ
>WENV182846161
OKJJ01000557
[OKJJ] human gut metagenome; human gut
198
271
+
Gly
TCC
[ENA]
¢þ
>WENV182846154
OKJJ01000324
[OKJJ] human gut metagenome; human gut
208
283
+
Trp
CCA
[ENA]
¢þ
>WENV182846164
OKJJ01000619
[OKJJ] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182846171
OKJJ01000807
[OKJJ] human gut metagenome; human gut
257
331
+
Glu
TTC
[ENA]
¢þ
>WENV182846126
OKJJ01000084
[OKJJ] human gut metagenome; human gut
286
358
+
Phe
GAA
[ENA]
¢þ
>WENV182846165
OKJJ01000619
[OKJJ] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182846172
OKJJ01000807
[OKJJ] human gut metagenome; human gut
339
414
+
Val
TAC
[ENA]
¢þ
>WENV182846127
OKJJ01000084
[OKJJ] human gut metagenome; human gut
363
445
+
Tyr
GTA
[ENA]
¢þ
>WENV182846166
OKJJ01000619
[OKJJ] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182846173
OKJJ01000807
[OKJJ] human gut metagenome; human gut
428
504
+
Asp
GTC
[ENA]
¢þ
>WENV182846128
OKJJ01000084
[OKJJ] human gut metagenome; human gut
449
522
+
Trp
CCA
[ENA]
¢þ
>WENV182846167
OKJJ01000619
[OKJJ] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182846129
OKJJ01000084
[OKJJ] human gut metagenome; human gut
559
632
+
His
GTG
[ENA]
¢þ
>WENV182846130
OKJJ01000084
[OKJJ] human gut metagenome; human gut
645
718
+
Gln
TTG
[ENA]
¢þ
>WENV182846134
OKJJ01000096
[OKJJ] human gut metagenome; human gut
737
811
+
Arg
CCT
[ENA]
¢þ
>WENV182846131
OKJJ01000084
[OKJJ] human gut metagenome; human gut
743
813
+
Cys
GCA
[ENA]
¢þ
>WENV182846132
OKJJ01000084
[OKJJ] human gut metagenome; human gut
826
911
+
Leu
CAA
[ENA]
¢þ
>WENV182846107
OKJJ01000036
[OKJJ] human gut metagenome; human gut
849
925
+
Arg
CCG
[ENA]
¢þ
>WENV182846108
OKJJ01000036
[OKJJ] human gut metagenome; human gut
985
1060
+
His
GTG
[ENA]
¢þ
>WENV182846146
OKJJ01000202
[OKJJ] human gut metagenome; human gut
1093
1018
-
fMet
CAT
[ENA]
¢þ
>WENV182846109
OKJJ01000036
[OKJJ] human gut metagenome; human gut
1102
1188
+
Leu
CAG
[ENA]
¢þ
>WENV182846110
OKJJ01000036
[OKJJ] human gut metagenome; human gut
1263
1339
+
Pro
TGG
[ENA]
¢þ
>WENV182846158
OKJJ01000481
[OKJJ] human gut metagenome; human gut
1355
1279
-
Arg
TCG
[ENA]
¢þ
>WENV182846096
OKJJ01000022
[OKJJ] human gut metagenome; human gut
1487
1413
-
Lys
CTT
[ENA]
¢þ
>WENV182846147
OKJJ01000217
[OKJJ] human gut metagenome; human gut
2024
1939
-
Leu
GAG
[ENA]
¢þ
>WENV182846157
OKJJ01000397
[OKJJ] human gut metagenome; human gut
2222
2297
+
Pro
TGG
[ENA]
¢þ
>WENV182846156
OKJJ01000360
[OKJJ] human gut metagenome; human gut
2696
2620
-
Ile
GAT
[ENA]
¢þ
>WENV182846155
OKJJ01000360
[OKJJ] human gut metagenome; human gut
2777
2702
-
Ala
TGC
[ENA]
¢þ
>WENV182846137
OKJJ01000108
[OKJJ] human gut metagenome; human gut
3433
3358
-
Ile2
CAT
[ENA]
¢þ
>WENV182846139
OKJJ01000130
[OKJJ] human gut metagenome; human gut
3478
3554
+
Arg
TCT
[ENA]
¢þ
>WENV182846140
OKJJ01000130
[OKJJ] human gut metagenome; human gut
3559
3634
+
His
GTG
[ENA]
¢þ
>WENV182846141
OKJJ01000130
[OKJJ] human gut metagenome; human gut
3638
3712
+
Gln
TTG
[ENA]
¢þ
>WENV182846145
OKJJ01000200
[OKJJ] human gut metagenome; human gut
3667
3753
+
Leu
CAA
[ENA]
¢þ
>WENV182846142
OKJJ01000130
[OKJJ] human gut metagenome; human gut
3778
3851
+
Gly
TCC
[ENA]
¢þ
>WENV182846143
OKJJ01000130
[OKJJ] human gut metagenome; human gut
3896
3971
+
Lys
CTT
[ENA]
¢þ
>WENV182846136
OKJJ01000105
[OKJJ] human gut metagenome; human gut
4044
4119
+
fMet
CAT
[ENA]
¢þ
>WENV182846117
OKJJ01000074
[OKJJ] human gut metagenome; human gut
4351
4277
-
Cys
GCA
[ENA]
¢þ
>WENV182846116
OKJJ01000074
[OKJJ] human gut metagenome; human gut
4430
4357
-
Gly
TCC
[ENA]
¢þ
>WENV182846115
OKJJ01000074
[OKJJ] human gut metagenome; human gut
4508
4434
-
Gly
GCC
[ENA]
¢þ
>WENV182846114
OKJJ01000074
[OKJJ] human gut metagenome; human gut
4589
4514
-
Phe
GAA
[ENA]
¢þ
>WENV182846148
OKJJ01000241
[OKJJ] human gut metagenome; human gut
4616
4691
+
Thr
TGT
[ENA]
¢þ
>WENV182846149
OKJJ01000241
[OKJJ] human gut metagenome; human gut
4717
4801
+
Tyr
GTA
[ENA]
¢þ
>WENV182846150
OKJJ01000241
[OKJJ] human gut metagenome; human gut
5000
5074
+
Gly
TCC
[ENA]
¢þ
>WENV182846152
OKJJ01000247
[OKJJ] human gut metagenome; human gut
5066
4991
-
Lys
TTT
[ENA]
¢þ
>WENV182846151
OKJJ01000241
[OKJJ] human gut metagenome; human gut
5081
5156
+
Thr
GGT
[ENA]
¢þ
>WENV182846144
OKJJ01000161
[OKJJ] human gut metagenome; human gut
5391
5467
+
Arg
ACG
[ENA]
¢þ
>WENV182846102
OKJJ01000025
[OKJJ] human gut metagenome; human gut
7743
7819
+
Asp
GTC
[ENA]
¢þ
>WENV182846123
OKJJ01000083
[OKJJ] human gut metagenome; human gut
10650
10560
-
Ser
GCT
[ENA]
¢þ
>WENV182846122
OKJJ01000083
[OKJJ] human gut metagenome; human gut
10746
10656
-
Ser
TGA
[ENA]
¢þ
>WENV182846121
OKJJ01000083
[OKJJ] human gut metagenome; human gut
11471
11381
-
Ser
GCT
[ENA]
¢þ
>WENV182846120
OKJJ01000083
[OKJJ] human gut metagenome; human gut
11567
11477
-
Ser
TGA
[ENA]
¢þ
>WENV182846112
OKJJ01000037
[OKJJ] human gut metagenome; human gut
12284
12195
-
Ser
CGA
[ENA]
¢þ
>WENV182846135
OKJJ01000096
[OKJJ] human gut metagenome; human gut
12603
12692
+
Ser
GGA
[ENA]
¢þ
>WENV182846133
OKJJ01000094
[OKJJ] human gut metagenome; human gut
12695
12769
+
Asn
GTT
[ENA]
¢þ
>WENV182846118
OKJJ01000079
[OKJJ] human gut metagenome; human gut
14022
14097
+
Thr
TGT
[ENA]
¢þ
>WENV182846119
OKJJ01000079
[OKJJ] human gut metagenome; human gut
14103
14188
+
Tyr
GTA
[ENA]
¢þ
>WENV182846105
OKJJ01000031
[OKJJ] human gut metagenome; human gut
29979
29908
-
Trp
CCA
[ENA]
¢þ
>WENV182846085
OKJJ01000018
[OKJJ] human gut metagenome; human gut
33747
33822
+
Ile2
CAT
[ENA]
¢þ
>WENV182846106
OKJJ01000033
[OKJJ] human gut metagenome; human gut
34078
34003
-
Thr
GGT
[ENA]
¢þ
>WENV182846062
OKJJ01000006
[OKJJ] human gut metagenome; human gut
35389
35303
-
Leu
CAG
[ENA]
¢þ
>WENV182846097
OKJJ01000023
[OKJJ] human gut metagenome; human gut
35483
35554
+
Asn
GTT
[ENA]
¢þ
>WENV182846070
OKJJ01000011
[OKJJ] human gut metagenome; human gut
37237
37162
-
Arg
CCT
[ENA]
¢þ
>WENV182846103
OKJJ01000025
[OKJJ] human gut metagenome; human gut
43312
43387
+
Thr
CGT
[ENA]
¢þ
>WENV182846111
OKJJ01000037
[OKJJ] human gut metagenome; human gut
43859
43784
-
Asn
GTT
[ENA]
¢þ
>WENV182846104
OKJJ01000028
[OKJJ] human gut metagenome; human gut
46380
46453
+
Arg
CCG
[ENA]
¢þ
>WENV182846098
OKJJ01000023
[OKJJ] human gut metagenome; human gut
59174
59247
+
Ile2
CAT
[ENA]
¢þ
>WENV182846057
OKJJ01000005
[OKJJ] human gut metagenome; human gut
66196
66272
+
Met
CAT
[ENA]
¢þ
>WENV182846058
OKJJ01000005
[OKJJ] human gut metagenome; human gut
66277
66351
+
Gln
CTG
[ENA]
¢þ
>WENV182846084
OKJJ01000017
[OKJJ] human gut metagenome; human gut
77678
77589
-
Ser
CGA
[ENA]
¢þ
>WENV182846080
OKJJ01000017
[OKJJ] human gut metagenome; human gut
78671
78746
+
Asn
GTT
[ENA]
¢þ
>WENV182846076
OKJJ01000013
[OKJJ] human gut metagenome; human gut
79419
79492
+
Gly
CCC
[ENA]
¢þ
>WENV182846067
OKJJ01000008
[OKJJ] human gut metagenome; human gut
80579
80495
-
Leu
CAA
[ENA]
¢þ
>WENV182846069
OKJJ01000011
[OKJJ] human gut metagenome; human gut
86575
86650
+
Arg
TCT
[ENA]
¢þ
>WENV182846071
OKJJ01000012
[OKJJ] human gut metagenome; human gut
91018
91107
+
Ser
GGA
[ENA]
¢þ
>WENV182846081
OKJJ01000017
[OKJJ] human gut metagenome; human gut
92461
92536
+
Asn
GTT
[ENA]
¢þ
>WENV182846068
OKJJ01000010
[OKJJ] human gut metagenome; human gut
99286
99361
+
Phe
GAA
[ENA]
¢þ
>WENV182846078
OKJJ01000014
[OKJJ] human gut metagenome; human gut
116827
116921
+
SeC
TCA
[ENA]
¢þ
>WENV182846100
OKJJ01000024
[OKJJ] human gut metagenome; human gut
126356
126432
+
Val
GAC
[ENA]
¢þ
>WENV182846099
OKJJ01000023
[OKJJ] human gut metagenome; human gut
126531
126459
-
Thr
GGT
[ENA]
¢þ
>WENV182846082
OKJJ01000017
[OKJJ] human gut metagenome; human gut
127533
127608
+
Asn
GTT
[ENA]
¢þ
>WENV182846059
OKJJ01000005
[OKJJ] human gut metagenome; human gut
153437
153361
-
Arg
TCT
[ENA]
¢þ
>WENV182846095
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154316
154243
-
Glu
TTC
[ENA]
¢þ
>WENV182846094
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154419
154330
-
Ser
GCT
[ENA]
¢þ
>WENV182846093
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154503
154428
-
Ile
GAT
[ENA]
¢þ
>WENV182846092
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154582
154512
-
Gly
TCC
[ENA]
¢þ
>WENV182846091
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154670
154593
-
Phe
GAA
[ENA]
¢þ
>WENV182846090
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154749
154674
-
Asp
GTC
[ENA]
¢þ
>WENV182846089
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154871
154796
-
fMet
CAT
[ENA]
¢þ
>WENV182846088
OKJJ01000022
[OKJJ] human gut metagenome; human gut
154993
154904
-
Ser
TGA
[ENA]
¢þ
>WENV182846087
OKJJ01000022
[OKJJ] human gut metagenome; human gut
155078
155005
-
Glu
TTC
[ENA]
¢þ
>WENV182846066
OKJJ01000008
[OKJJ] human gut metagenome; human gut
159193
159117
-
fMet
CAT
[ENA]
¢þ
>WENV182846065
OKJJ01000008
[OKJJ] human gut metagenome; human gut
159340
159254
-
Leu
GAG
[ENA]
¢þ
>WENV182846079
OKJJ01000014
[OKJJ] human gut metagenome; human gut
166036
166112
+
Pro
TGG
[ENA]
¢þ
>WENV182846052
OKJJ01000002
[OKJJ] human gut metagenome; human gut
168587
168503
-
Tyr
GTA
[ENA]
¢þ
>WENV182846075
OKJJ01000012
[OKJJ] human gut metagenome; human gut
168686
168601
-
Leu
TAA
[ENA]
¢þ
>WENV182846051
OKJJ01000002
[OKJJ] human gut metagenome; human gut
168768
168684
-
Tyr
GTA
[ENA]
¢þ
>WENV182846074
OKJJ01000012
[OKJJ] human gut metagenome; human gut
168770
168697
-
Cys
GCA
[ENA]
¢þ
>WENV182846083
OKJJ01000017
[OKJJ] human gut metagenome; human gut
168880
168955
+
Asn
GTT
[ENA]
¢þ
>WENV182846073
OKJJ01000012
[OKJJ] human gut metagenome; human gut
169519
169444
-
Gly
GCC
[ENA]
¢þ
>WENV182846077
OKJJ01000013
[OKJJ] human gut metagenome; human gut
170950
170874
-
fMet
CAT
[ENA]
¢þ
>WENV182846072
OKJJ01000012
[OKJJ] human gut metagenome; human gut
220841
220754
-
Ser
TGA
[ENA]
¢þ
>WENV182846056
OKJJ01000004
[OKJJ] human gut metagenome; human gut
225561
225633
+
Thr
CGT
[ENA]
¢þ
>WENV182846064
OKJJ01000008
[OKJJ] human gut metagenome; human gut
226891
226816
-
Gly
GCC
[ENA]
¢þ
>WENV182846053
OKJJ01000003
[OKJJ] human gut metagenome; human gut
240270
240356
+
Leu
GAG
[ENA]
¢þ
>WENV182846054
OKJJ01000003
[OKJJ] human gut metagenome; human gut
251604
251686
+
Tyr
GTA
[ENA]
¢þ
>WENV182846055
OKJJ01000003
[OKJJ] human gut metagenome; human gut
251694
251767
+
Gln
TTG
[ENA]
¢þ
>WENV182846063
OKJJ01000008
[OKJJ] human gut metagenome; human gut
252451
252526
+
Phe
GAA
[ENA]
¢þ
>WENV182846060
OKJJ01000006
[OKJJ] human gut metagenome; human gut
261365
261457
+
Ser
GCT
[ENA]
¢þ
>WENV182846061
OKJJ01000006
[OKJJ] human gut metagenome; human gut
261461
261537
+
Arg
ACG
[ENA]
¢þ
>WENV182846050
OKJJ01000001
[OKJJ] human gut metagenome; human gut
538802
538727
-
Lys
TTT
[ENA]
¢þ
>WENV182846049
OKJJ01000001
[OKJJ] human gut metagenome; human gut
538885
538810
-
Val
TAC
[ENA]
¢þ
>WENV182846044
OKJJ01000001
[OKJJ] human gut metagenome; human gut
541268
541343
+
Ala
GGC
[ENA]
¢þ
>WENV182846048
OKJJ01000001
[OKJJ] human gut metagenome; human gut
581756
581682
-
Arg
CCT
[ENA]
¢þ
>WENV182846045
OKJJ01000001
[OKJJ] human gut metagenome; human gut
728476
728563
+
Ser
TGA
[ENA]
¢þ
>WENV182846046
OKJJ01000001
[OKJJ] human gut metagenome; human gut
728570
728645
+
Thr
TGT
[ENA]
¢þ
>WENV182846047
OKJJ01000001
[OKJJ] human gut metagenome; human gut
736824
736748
-
Pro
GGG
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK