This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKJK] human gut metagenome; human gut
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182846218
OKJK01001006
[OKJK] human gut metagenome; human gut
2
76
+
Arg
TCT
[ENA]
¢þ
>WENV182846199
OKJK01000218
[OKJK] human gut metagenome; human gut
61
136
+
Val
TAC
[ENA]
¢þ
>WENV182846186
OKJK01000019
[OKJK] human gut metagenome; human gut
67
141
+
Val
TAC
[ENA]
¢þ
>WENV182846212
OKJK01000995
[OKJK] human gut metagenome; human gut
67
141
+
Ala
TGC
[ENA]
¢þ
>WENV182846210
OKJK01000663
[OKJK] human gut metagenome; human gut
107
197
+
Ser
GGA
[ENA]
¢þ
>WENV182846209
OKJK01000395
[OKJK] human gut metagenome; human gut
114
39
-
Trp
CCA
[ENA]
¢þ
>WENV182846200
OKJK01000218
[OKJK] human gut metagenome; human gut
143
218
+
Thr
TGT
[ENA]
¢þ
>WENV182846187
OKJK01000019
[OKJK] human gut metagenome; human gut
146
220
+
Lys
TTT
[ENA]
¢þ
>WENV182846213
OKJK01000995
[OKJK] human gut metagenome; human gut
162
237
+
Met
CAT
[ENA]
¢þ
>WENV182846208
OKJK01000395
[OKJK] human gut metagenome; human gut
199
123
-
Asp
GTC
[ENA]
¢þ
>WENV182846201
OKJK01000218
[OKJK] human gut metagenome; human gut
223
306
+
Tyr
GTA
[ENA]
¢þ
>WENV182846188
OKJK01000019
[OKJK] human gut metagenome; human gut
235
318
+
Leu
TAG
[ENA]
¢þ
>WENV182846214
OKJK01000995
[OKJK] human gut metagenome; human gut
256
331
+
Ile2
CAT
[ENA]
¢þ
>WENV182846211
OKJK01000775
[OKJK] human gut metagenome; human gut
292
366
+
Glu
TTC
[ENA]
¢þ
>WENV182846202
OKJK01000218
[OKJK] human gut metagenome; human gut
315
388
+
Trp
CCA
[ENA]
¢þ
>WENV182846189
OKJK01000019
[OKJK] human gut metagenome; human gut
324
399
+
Thr
TGT
[ENA]
¢þ
>WENV182846215
OKJK01000995
[OKJK] human gut metagenome; human gut
364
453
+
Ser
TGA
[ENA]
¢þ
>WENV182846203
OKJK01000218
[OKJK] human gut metagenome; human gut
391
466
+
His
GTG
[ENA]
¢þ
>WENV182846190
OKJK01000019
[OKJK] human gut metagenome; human gut
404
475
+
Gly
GCC
[ENA]
¢þ
>WENV182846204
OKJK01000218
[OKJK] human gut metagenome; human gut
484
557
+
Gly
TCC
[ENA]
¢þ
>WENV182846216
OKJK01000995
[OKJK] human gut metagenome; human gut
486
561
+
fMet
CAT
[ENA]
¢þ
>WENV182846191
OKJK01000019
[OKJK] human gut metagenome; human gut
491
576
+
Leu
TAA
[ENA]
¢þ
>WENV182846220
OKJK01001019
[OKJK] human gut metagenome; human gut
525
450
-
Lys
TTT
[ENA]
¢þ
>WENV182846205
OKJK01000218
[OKJK] human gut metagenome; human gut
567
641
+
Asn
GTT
[ENA]
¢þ
>WENV182846192
OKJK01000019
[OKJK] human gut metagenome; human gut
591
664
+
Arg
ACG
[ENA]
¢þ
>WENV182846217
OKJK01000995
[OKJK] human gut metagenome; human gut
599
675
+
Asp
GTC
[ENA]
¢þ
>WENV182846219
OKJK01001019
[OKJK] human gut metagenome; human gut
604
529
-
Val
TAC
[ENA]
¢þ
>WENV182846206
OKJK01000218
[OKJK] human gut metagenome; human gut
644
734
+
Ser
GCT
[ENA]
¢þ
>WENV182846207
OKJK01000303
[OKJK] human gut metagenome; human gut
693
764
+
Arg
CCG
[ENA]
¢þ
>WENV182846193
OKJK01000019
[OKJK] human gut metagenome; human gut
754
827
+
Pro
TGG
[ENA]
¢þ
>WENV182846196
OKJK01000089
[OKJK] human gut metagenome; human gut
3816
3908
+
Ser
TGA
[ENA]
¢þ
>WENV182846197
OKJK01000089
[OKJK] human gut metagenome; human gut
3920
3993
+
fMet
CAT
[ENA]
¢þ
>WENV182846198
OKJK01000089
[OKJK] human gut metagenome; human gut
4008
4083
+
Asp
GTC
[ENA]
¢þ
>WENV182846185
OKJK01000017
[OKJK] human gut metagenome; human gut
12347
12258
-
Ser
CGA
[ENA]
¢þ
>WENV182846195
OKJK01000039
[OKJK] human gut metagenome; human gut
18330
18245
-
Leu
CAA
[ENA]
¢þ
>WENV182846194
OKJK01000039
[OKJK] human gut metagenome; human gut
18413
18343
-
Cys
GCA
[ENA]
¢þ
>WENV182846178
OKJK01000004
[OKJK] human gut metagenome; human gut
38396
38324
-
Thr
GGT
[ENA]
¢þ
>WENV182846184
OKJK01000017
[OKJK] human gut metagenome; human gut
46582
46507
-
Asn
GTT
[ENA]
¢þ
>WENV182846181
OKJK01000013
[OKJK] human gut metagenome; human gut
57799
57885
+
Leu
GAG
[ENA]
¢þ
>WENV182846180
OKJK01000012
[OKJK] human gut metagenome; human gut
59312
59385
+
Arg
CCG
[ENA]
¢þ
>WENV182846182
OKJK01000013
[OKJK] human gut metagenome; human gut
69130
69212
+
Tyr
GTA
[ENA]
¢þ
>WENV182846183
OKJK01000013
[OKJK] human gut metagenome; human gut
69220
69293
+
Gln
TTG
[ENA]
¢þ
>WENV182846177
OKJK01000004
[OKJK] human gut metagenome; human gut
92396
92467
+
Trp
CCA
[ENA]
¢þ
>WENV182846174
OKJK01000002
[OKJK] human gut metagenome; human gut
116489
116417
-
Thr
CGT
[ENA]
¢þ
>WENV182846176
OKJK01000003
[OKJK] human gut metagenome; human gut
132120
132045
-
Arg
TCT
[ENA]
¢þ
>WENV182846179
OKJK01000006
[OKJK] human gut metagenome; human gut
152753
152827
+
Lys
CTT
[ENA]
¢þ
>WENV182846175
OKJK01000003
[OKJK] human gut metagenome; human gut
181459
181534
+
Arg
CCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK