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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OKJY] human gut metagenome; human gut
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182847439
OKJY01002479
[OKJY] human gut metagenome; human gut
196
282
+
Leu
GAG
[ENA]
¢þ
>WENV182847435
OKJY01002203
[OKJY] human gut metagenome; human gut
205
281
+
Arg
ACG
[ENA]
¢þ
>WENV182847443
OKJY01004374
[OKJY] human gut metagenome; human gut
239
164
-
Thr
CGT
[ENA]
¢þ
>WENV182847412
OKJY01000300
[OKJY] human gut metagenome; human gut
245
151
-
SeC
TCA
[ENA]
¢þ
>WENV182847434
OKJY01002148
[OKJY] human gut metagenome; human gut
297
381
+
Leu
CAA
[ENA]
¢þ
>WENV182847430
OKJY01001526
[OKJY] human gut metagenome; human gut
316
227
-
Ser
CGA
[ENA]
¢þ
>WENV182847444
OKJY01004407
[OKJY] human gut metagenome; human gut
347
422
+
Ile2
CAT
[ENA]
¢þ
>WENV182847411
OKJY01000118
[OKJY] human gut metagenome; human gut
376
301
-
Phe
GAA
[ENA]
¢þ
>WENV182847440
OKJY01002653
[OKJY] human gut metagenome; human gut
476
548
+
Glu
TTC
[ENA]
¢þ
>WENV182847423
OKJY01000553
[OKJY] human gut metagenome; human gut
499
412
-
Ser
GGA
[ENA]
¢þ
>WENV182847427
OKJY01001392
[OKJY] human gut metagenome; human gut
645
720
+
Gly
GCC
[ENA]
¢þ
>WENV182847441
OKJY01003829
[OKJY] human gut metagenome; human gut
668
595
-
Asn
GTT
[ENA]
¢þ
>WENV182847442
OKJY01003891
[OKJY] human gut metagenome; human gut
669
594
-
Asn
GTT
[ENA]
¢þ
>WENV182847428
OKJY01001392
[OKJY] human gut metagenome; human gut
761
834
+
Cys
GCA
[ENA]
¢þ
>WENV182847438
OKJY01002295
[OKJY] human gut metagenome; human gut
775
699
-
Arg
TCT
[ENA]
¢þ
>WENV182847422
OKJY01000539
[OKJY] human gut metagenome; human gut
805
729
-
Pro
CGG
[ENA]
¢þ
>WENV182847429
OKJY01001392
[OKJY] human gut metagenome; human gut
847
933
+
Leu
TAA
[ENA]
¢þ
>WENV182847437
OKJY01002295
[OKJY] human gut metagenome; human gut
865
789
-
Arg
TCG
[ENA]
¢þ
>WENV182847431
OKJY01001540
[OKJY] human gut metagenome; human gut
885
960
+
Thr
TGT
[ENA]
¢þ
>WENV182847425
OKJY01000945
[OKJY] human gut metagenome; human gut
891
804
-
Ser
TGA
[ENA]
¢þ
>WENV182847426
OKJY01001186
[OKJY] human gut metagenome; human gut
922
847
-
Thr
CGT
[ENA]
¢þ
>WENV182847436
OKJY01002295
[OKJY] human gut metagenome; human gut
948
873
-
Ile2
CAT
[ENA]
¢þ
>WENV182847410
OKJY01000093
[OKJY] human gut metagenome; human gut
956
880
-
Pro
GGG
[ENA]
¢þ
>WENV182847432
OKJY01001540
[OKJY] human gut metagenome; human gut
971
1055
+
Tyr
GTA
[ENA]
¢þ
>WENV182847419
OKJY01000498
[OKJY] human gut metagenome; human gut
972
896
-
Asp
GTC
[ENA]
¢þ
>WENV182847433
OKJY01001718
[OKJY] human gut metagenome; human gut
1047
973
-
Arg
CCT
[ENA]
¢þ
>WENV182847421
OKJY01000512
[OKJY] human gut metagenome; human gut
1239
1165
-
Gln
CTG
[ENA]
¢þ
>WENV182847420
OKJY01000512
[OKJY] human gut metagenome; human gut
1364
1288
-
Met
CAT
[ENA]
¢þ
>WENV182847415
OKJY01000412
[OKJY] human gut metagenome; human gut
1440
1516
+
Arg
CCG
[ENA]
¢þ
>WENV182847416
OKJY01000412
[OKJY] human gut metagenome; human gut
1575
1650
+
His
GTG
[ENA]
¢þ
>WENV182847424
OKJY01000942
[OKJY] human gut metagenome; human gut
1599
1672
+
Gly
CCC
[ENA]
¢þ
>WENV182847417
OKJY01000412
[OKJY] human gut metagenome; human gut
1674
1760
+
Leu
CAG
[ENA]
¢þ
>WENV182847418
OKJY01000412
[OKJY] human gut metagenome; human gut
1803
1879
+
Pro
TGG
[ENA]
¢þ
>WENV182847413
OKJY01000304
[OKJY] human gut metagenome; human gut
2268
2343
+
Val
TAC
[ENA]
¢þ
>WENV182847414
OKJY01000304
[OKJY] human gut metagenome; human gut
2348
2423
+
Lys
TTT
[ENA]
¢þ
>WENV182847409
OKJY01000008
[OKJY] human gut metagenome; human gut
3991
3916
-
Glu
TTC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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