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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKKM] human gut metagenome; human gut
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182848917
OKKM01000022
[OKKM] human gut metagenome; human gut
105
181
+
Asp
GTC
[ENA]
¢þ
>WENV182848939
OKKM01000080
[OKKM] human gut metagenome; human gut
128
200
+
Ala
TGC
[ENA]
¢þ
>WENV182848909
OKKM01000010
[OKKM] human gut metagenome; human gut
132
206
+
Gln
CTG
[ENA]
¢þ
>WENV182848948
OKKM01000132
[OKKM] human gut metagenome; human gut
141
66
-
Thr
TGT
[ENA]
¢þ
>WENV182848933
OKKM01000027
[OKKM] human gut metagenome; human gut
152
78
-
Gln
TTG
[ENA]
¢þ
>WENV182848918
OKKM01000022
[OKKM] human gut metagenome; human gut
235
310
+
Trp
CCA
[ENA]
¢þ
>WENV182848932
OKKM01000027
[OKKM] human gut metagenome; human gut
260
176
-
Leu
TAG
[ENA]
¢þ
>WENV182848934
OKKM01000030
[OKKM] human gut metagenome; human gut
276
201
-
Phe
GAA
[ENA]
¢þ
>WENV182848979
OKKM01000683
[OKKM] human gut metagenome; human gut
308
223
-
Leu
CAG
[ENA]
¢þ
>WENV182848931
OKKM01000027
[OKKM] human gut metagenome; human gut
346
270
-
Met
CAT
[ENA]
¢þ
>WENV182848978
OKKM01000683
[OKKM] human gut metagenome; human gut
424
338
-
Leu
GAG
[ENA]
¢þ
>WENV182848982
OKKM01001178
[OKKM] human gut metagenome; human gut
426
498
+
Thr
CGT
[ENA]
¢þ
>WENV182848949
OKKM01000136
[OKKM] human gut metagenome; human gut
432
359
-
Arg
CCG
[ENA]
¢þ
>WENV182848981
OKKM01000912
[OKKM] human gut metagenome; human gut
448
373
-
Arg
TCT
[ENA]
¢þ
>WENV182848977
OKKM01000683
[OKKM] human gut metagenome; human gut
509
434
-
Phe
GAA
[ENA]
¢þ
>WENV182848976
OKKM01000683
[OKKM] human gut metagenome; human gut
590
514
-
Asp
GTC
[ENA]
¢þ
>WENV182848960
OKKM01000570
[OKKM] human gut metagenome; human gut
648
575
-
Glu
TTC
[ENA]
¢þ
>WENV182848975
OKKM01000683
[OKKM] human gut metagenome; human gut
668
593
-
Val
TAC
[ENA]
¢þ
>WENV182848983
OKKM01001355
[OKKM] human gut metagenome; human gut
711
782
+
Trp
CCA
[ENA]
¢þ
>WENV182848980
OKKM01000780
[OKKM] human gut metagenome; human gut
743
654
-
Ser
TGA
[ENA]
¢þ
>WENV182848974
OKKM01000683
[OKKM] human gut metagenome; human gut
750
676
-
Glu
TTC
[ENA]
¢þ
>WENV182848959
OKKM01000570
[OKKM] human gut metagenome; human gut
751
662
-
Ser
GCT
[ENA]
¢þ
>WENV182848968
OKKM01000600
[OKKM] human gut metagenome; human gut
802
717
-
Leu
CAA
[ENA]
¢þ
>WENV182848973
OKKM01000683
[OKKM] human gut metagenome; human gut
829
754
-
Lys
TTT
[ENA]
¢þ
>WENV182848958
OKKM01000570
[OKKM] human gut metagenome; human gut
834
761
-
Ile
GAT
[ENA]
¢þ
>WENV182848967
OKKM01000600
[OKKM] human gut metagenome; human gut
885
815
-
Cys
GCA
[ENA]
¢þ
>WENV182848972
OKKM01000683
[OKKM] human gut metagenome; human gut
909
835
-
Gln
CTG
[ENA]
¢þ
>WENV182848957
OKKM01000570
[OKKM] human gut metagenome; human gut
918
848
-
Gly
TCC
[ENA]
¢þ
>WENV182848950
OKKM01000161
[OKKM] human gut metagenome; human gut
941
855
-
Leu
GAG
[ENA]
¢þ
>WENV182848966
OKKM01000600
[OKKM] human gut metagenome; human gut
983
910
-
Gln
TTG
[ENA]
¢þ
>WENV182848971
OKKM01000683
[OKKM] human gut metagenome; human gut
986
911
-
Asn
GTT
[ENA]
¢þ
>WENV182848956
OKKM01000570
[OKKM] human gut metagenome; human gut
1006
929
-
Phe
GAA
[ENA]
¢þ
>WENV182848965
OKKM01000600
[OKKM] human gut metagenome; human gut
1069
996
-
His
GTG
[ENA]
¢þ
>WENV182848970
OKKM01000683
[OKKM] human gut metagenome; human gut
1077
1003
-
Gly
GCC
[ENA]
¢þ
>WENV182848955
OKKM01000570
[OKKM] human gut metagenome; human gut
1085
1010
-
Asp
GTC
[ENA]
¢þ
>WENV182848964
OKKM01000600
[OKKM] human gut metagenome; human gut
1179
1106
-
Trp
CCA
[ENA]
¢þ
>WENV182848954
OKKM01000570
[OKKM] human gut metagenome; human gut
1197
1122
-
fMet
CAT
[ENA]
¢þ
>WENV182848963
OKKM01000600
[OKKM] human gut metagenome; human gut
1265
1183
-
Tyr
GTA
[ENA]
¢þ
>WENV182848953
OKKM01000570
[OKKM] human gut metagenome; human gut
1319
1230
-
Ser
TGA
[ENA]
¢þ
>WENV182848962
OKKM01000600
[OKKM] human gut metagenome; human gut
1342
1270
-
Phe
GAA
[ENA]
¢þ
>WENV182848952
OKKM01000570
[OKKM] human gut metagenome; human gut
1427
1352
-
Ile2
CAT
[ENA]
¢þ
>WENV182848969
OKKM01000603
[OKKM] human gut metagenome; human gut
1427
1510
+
Leu
TAG
[ENA]
¢þ
>WENV182848961
OKKM01000600
[OKKM] human gut metagenome; human gut
1463
1388
-
Asp
GTC
[ENA]
¢þ
>WENV182848951
OKKM01000570
[OKKM] human gut metagenome; human gut
1521
1446
-
Met
CAT
[ENA]
¢þ
>WENV182848916
OKKM01000021
[OKKM] human gut metagenome; human gut
1782
1857
+
Asn
GTT
[ENA]
¢þ
>WENV182848935
OKKM01000038
[OKKM] human gut metagenome; human gut
2386
2312
-
Gly
TCC
[ENA]
¢þ
>WENV182848940
OKKM01000080
[OKKM] human gut metagenome; human gut
3515
3589
+
Val
TAC
[ENA]
¢þ
>WENV182848938
OKKM01000069
[OKKM] human gut metagenome; human gut
3539
3464
-
Ala
TGC
[ENA]
¢þ
>WENV182848941
OKKM01000080
[OKKM] human gut metagenome; human gut
3594
3668
+
Lys
TTT
[ENA]
¢þ
>WENV182848937
OKKM01000069
[OKKM] human gut metagenome; human gut
3660
3584
-
Ile
GAT
[ENA]
¢þ
>WENV182848942
OKKM01000080
[OKKM] human gut metagenome; human gut
3683
3766
+
Leu
TAG
[ENA]
¢þ
>WENV182848943
OKKM01000080
[OKKM] human gut metagenome; human gut
3772
3847
+
Thr
TGT
[ENA]
¢þ
>WENV182848944
OKKM01000080
[OKKM] human gut metagenome; human gut
3852
3923
+
Gly
GCC
[ENA]
¢þ
>WENV182848945
OKKM01000080
[OKKM] human gut metagenome; human gut
3939
4024
+
Leu
TAA
[ENA]
¢þ
>WENV182848946
OKKM01000080
[OKKM] human gut metagenome; human gut
4039
4112
+
Arg
ACG
[ENA]
¢þ
>WENV182848947
OKKM01000080
[OKKM] human gut metagenome; human gut
4124
4197
+
Pro
TGG
[ENA]
¢þ
>WENV182848928
OKKM01000025
[OKKM] human gut metagenome; human gut
6922
6997
+
Thr
CGT
[ENA]
¢þ
>WENV182848936
OKKM01000039
[OKKM] human gut metagenome; human gut
17902
17986
+
Leu
CAA
[ENA]
¢þ
>WENV182848908
OKKM01000009
[OKKM] human gut metagenome; human gut
27437
27361
-
Pro
GGG
[ENA]
¢þ
>WENV182848919
OKKM01000022
[OKKM] human gut metagenome; human gut
35511
35587
+
Arg
CCG
[ENA]
¢þ
>WENV182848920
OKKM01000022
[OKKM] human gut metagenome; human gut
35643
35718
+
His
GTG
[ENA]
¢þ
>WENV182848921
OKKM01000022
[OKKM] human gut metagenome; human gut
35742
35828
+
Leu
CAG
[ENA]
¢þ
>WENV182848922
OKKM01000022
[OKKM] human gut metagenome; human gut
35871
35947
+
Pro
TGG
[ENA]
¢þ
>WENV182848927
OKKM01000023
[OKKM] human gut metagenome; human gut
52806
52720
-
Leu
TAA
[ENA]
¢þ
>WENV182848926
OKKM01000023
[OKKM] human gut metagenome; human gut
52893
52820
-
Cys
GCA
[ENA]
¢þ
>WENV182848925
OKKM01000023
[OKKM] human gut metagenome; human gut
53009
52934
-
Gly
GCC
[ENA]
¢þ
>WENV182848929
OKKM01000025
[OKKM] human gut metagenome; human gut
60966
60890
-
Asp
GTC
[ENA]
¢þ
>WENV182848930
OKKM01000027
[OKKM] human gut metagenome; human gut
61747
61822
+
Lys
TTT
[ENA]
¢þ
>WENV182848907
OKKM01000007
[OKKM] human gut metagenome; human gut
63890
63814
-
Pro
CGG
[ENA]
¢þ
>WENV182848913
OKKM01000020
[OKKM] human gut metagenome; human gut
69458
69532
+
Arg
CCT
[ENA]
¢þ
>WENV182848924
OKKM01000023
[OKKM] human gut metagenome; human gut
74199
74110
-
Ser
CGA
[ENA]
¢þ
>WENV182848923
OKKM01000023
[OKKM] human gut metagenome; human gut
75191
75266
+
Asn
GTT
[ENA]
¢þ
>WENV182848915
OKKM01000020
[OKKM] human gut metagenome; human gut
91498
91423
-
Ala
GGC
[ENA]
¢þ
>WENV182848914
OKKM01000020
[OKKM] human gut metagenome; human gut
94200
94275
+
Val
TAC
[ENA]
¢þ
>WENV182848912
OKKM01000012
[OKKM] human gut metagenome; human gut
122284
122208
-
Arg
ACG
[ENA]
¢þ
>WENV182848911
OKKM01000012
[OKKM] human gut metagenome; human gut
122457
122381
-
Arg
ACG
[ENA]
¢þ
>WENV182848910
OKKM01000012
[OKKM] human gut metagenome; human gut
122554
122462
-
Ser
GCT
[ENA]
¢þ
>WENV182848900
OKKM01000002
[OKKM] human gut metagenome; human gut
137844
137771
-
Gly
CCC
[ENA]
¢þ
>WENV182848904
OKKM01000006
[OKKM] human gut metagenome; human gut
175112
175199
+
Ser
TGA
[ENA]
¢þ
>WENV182848906
OKKM01000007
[OKKM] human gut metagenome; human gut
190446
190540
+
SeC
TCA
[ENA]
¢þ
>WENV182848895
OKKM01000002
[OKKM] human gut metagenome; human gut
225533
225608
+
Phe
GAA
[ENA]
¢þ
>WENV182848903
OKKM01000004
[OKKM] human gut metagenome; human gut
229575
229651
+
Arg
TCT
[ENA]
¢þ
>WENV182848905
OKKM01000006
[OKKM] human gut metagenome; human gut
237713
237626
-
Ser
GGA
[ENA]
¢þ
>WENV182848901
OKKM01000003
[OKKM] human gut metagenome; human gut
279854
279940
+
Leu
CAG
[ENA]
¢þ
>WENV182848902
OKKM01000003
[OKKM] human gut metagenome; human gut
279971
280057
+
Leu
CAG
[ENA]
¢þ
>WENV182848896
OKKM01000002
[OKKM] human gut metagenome; human gut
291683
291758
+
Ile2
CAT
[ENA]
¢þ
>WENV182848892
OKKM01000001
[OKKM] human gut metagenome; human gut
296257
296333
+
Val
GAC
[ENA]
¢þ
>WENV182848893
OKKM01000001
[OKKM] human gut metagenome; human gut
296338
296414
+
Val
GAC
[ENA]
¢þ
>WENV182848899
OKKM01000002
[OKKM] human gut metagenome; human gut
398366
398290
-
fMet
CAT
[ENA]
¢þ
>WENV182848898
OKKM01000002
[OKKM] human gut metagenome; human gut
402399
402313
-
Leu
GAG
[ENA]
¢þ
>WENV182848897
OKKM01000002
[OKKM] human gut metagenome; human gut
491407
491332
-
Thr
GGT
[ENA]
¢þ
>WENV182848894
OKKM01000001
[OKKM] human gut metagenome; human gut
514838
514922
+
Tyr
GTA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK