This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKKV] human gut metagenome; human gut
HIT:
142 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182849940
OKKV01000252
[OKKV] human gut metagenome; human gut
4
89
+
Leu
CAG
[ENA]
¢þ
>WENV182849956
OKKV01000372
[OKKV] human gut metagenome; human gut
62
134
+
Thr
GGT
[ENA]
¢þ
>WENV182850012
OKKV01001558
[OKKV] human gut metagenome; human gut
97
173
+
Asp
GTC
[ENA]
¢þ
>WENV182850015
OKKV01001584
[OKKV] human gut metagenome; human gut
101
176
+
Trp
CCA
[ENA]
¢þ
>WENV182850030
OKKV01002639
[OKKV] human gut metagenome; human gut
114
190
+
Ile
GAT
[ENA]
¢þ
>WENV182849945
OKKV01000282
[OKKV] human gut metagenome; human gut
131
59
-
Arg
CCG
[ENA]
¢þ
>WENV182849976
OKKV01000626
[OKKV] human gut metagenome; human gut
145
57
-
Ser
GGA
[ENA]
¢þ
>WENV182849930
OKKV01000176
[OKKV] human gut metagenome; human gut
151
59
-
Ser
GCT
[ENA]
¢þ
>WENV182850013
OKKV01001558
[OKKV] human gut metagenome; human gut
182
257
+
Trp
CCA
[ENA]
¢þ
>WENV182850031
OKKV01002639
[OKKV] human gut metagenome; human gut
233
308
+
Ala
TGC
[ENA]
¢þ
>WENV182849939
OKKV01000251
[OKKV] human gut metagenome; human gut
279
203
-
Pro
CGG
[ENA]
¢þ
>WENV182850032
OKKV01003159
[OKKV] human gut metagenome; human gut
279
354
+
Pro
TGG
[ENA]
¢þ
>WENV182850033
OKKV01003330
[OKKV] human gut metagenome; human gut
351
279
-
Ala
TGC
[ENA]
¢þ
>WENV182849937
OKKV01000236
[OKKV] human gut metagenome; human gut
376
303
-
Gly
CCC
[ENA]
¢þ
>WENV182850034
OKKV01003502
[OKKV] human gut metagenome; human gut
450
374
-
fMet
CAT
[ENA]
¢þ
>WENV182850016
OKKV01001597
[OKKV] human gut metagenome; human gut
488
416
-
Cys
GCA
[ENA]
¢þ
>WENV182850017
OKKV01001683
[OKKV] human gut metagenome; human gut
695
769
+
Arg
CCT
[ENA]
¢þ
>WENV182850003
OKKV01001244
[OKKV] human gut metagenome; human gut
733
807
+
Ala
GGC
[ENA]
¢þ
>WENV182850011
OKKV01001524
[OKKV] human gut metagenome; human gut
734
661
-
fMet
CAT
[ENA]
¢þ
>WENV182850009
OKKV01001427
[OKKV] human gut metagenome; human gut
862
938
+
Arg
TCT
[ENA]
¢þ
>WENV182850014
OKKV01001568
[OKKV] human gut metagenome; human gut
965
1037
+
Arg
CCT
[ENA]
¢þ
>WENV182849997
OKKV01001104
[OKKV] human gut metagenome; human gut
1052
1127
+
Asn
GTT
[ENA]
¢þ
>WENV182849983
OKKV01000676
[OKKV] human gut metagenome; human gut
1062
989
-
Trp
CCA
[ENA]
¢þ
>WENV182850023
OKKV01001957
[OKKV] human gut metagenome; human gut
1090
1163
+
Trp
CCA
[ENA]
¢þ
>WENV182849985
OKKV01000770
[OKKV] human gut metagenome; human gut
1125
1210
+
Ser
TGA
[ENA]
¢þ
>WENV182849917
OKKV01000078
[OKKV] human gut metagenome; human gut
1299
1224
-
Phe
GAA
[ENA]
¢þ
>WENV182850027
OKKV01002214
[OKKV] human gut metagenome; human gut
1327
1402
+
Lys
TTT
[ENA]
¢þ
>WENV182850029
OKKV01002381
[OKKV] human gut metagenome; human gut
1407
1482
+
Lys
TTT
[ENA]
¢þ
>WENV182849988
OKKV01000833
[OKKV] human gut metagenome; human gut
1416
1342
-
Asp
GTC
[ENA]
¢þ
>WENV182850028
OKKV01002234
[OKKV] human gut metagenome; human gut
1428
1354
-
His
GTG
[ENA]
¢þ
>WENV182849957
OKKV01000372
[OKKV] human gut metagenome; human gut
1428
1501
+
Trp
CCA
[ENA]
¢þ
>WENV182849980
OKKV01000661
[OKKV] human gut metagenome; human gut
1492
1567
+
Asn
GTT
[ENA]
¢þ
>WENV182849959
OKKV01000405
[OKKV] human gut metagenome; human gut
1571
1498
-
Pro
CGG
[ENA]
¢þ
>WENV182850002
OKKV01001200
[OKKV] human gut metagenome; human gut
1645
1718
+
Lys
TTT
[ENA]
¢þ
>WENV182849998
OKKV01001122
[OKKV] human gut metagenome; human gut
1653
1578
-
Lys
TTT
[ENA]
¢þ
>WENV182849991
OKKV01000886
[OKKV] human gut metagenome; human gut
1691
1607
-
Leu
CAA
[ENA]
¢þ
>WENV182850021
OKKV01001850
[OKKV] human gut metagenome; human gut
1745
1672
-
Pro
CGG
[ENA]
¢þ
>WENV182849958
OKKV01000405
[OKKV] human gut metagenome; human gut
1753
1828
+
Phe
GAA
[ENA]
¢þ
>WENV182850005
OKKV01001274
[OKKV] human gut metagenome; human gut
1792
1867
+
Asn
GTT
[ENA]
¢þ
>WENV182850020
OKKV01001850
[OKKV] human gut metagenome; human gut
1833
1760
-
Phe
GAA
[ENA]
¢þ
>WENV182850025
OKKV01002065
[OKKV] human gut metagenome; human gut
1951
1877
-
Ala
TGC
[ENA]
¢þ
>WENV182849970
OKKV01000476
[OKKV] human gut metagenome; human gut
1959
1873
-
Leu
GAG
[ENA]
¢þ
>WENV182850026
OKKV01002128
[OKKV] human gut metagenome; human gut
1994
1920
-
Ala
GGC
[ENA]
¢þ
>WENV182850008
OKKV01001372
[OKKV] human gut metagenome; human gut
2005
1921
-
Leu
CAA
[ENA]
¢þ
>WENV182850024
OKKV01002065
[OKKV] human gut metagenome; human gut
2040
1966
-
Ile
GAT
[ENA]
¢þ
>WENV182849962
OKKV01000418
[OKKV] human gut metagenome; human gut
2095
2183
+
Ser
GGA
[ENA]
¢þ
>WENV182849994
OKKV01000993
[OKKV] human gut metagenome; human gut
2305
2379
+
Arg
TCT
[ENA]
¢þ
>WENV182849972
OKKV01000530
[OKKV] human gut metagenome; human gut
2358
2433
+
Thr
CGT
[ENA]
¢þ
>WENV182850022
OKKV01001885
[OKKV] human gut metagenome; human gut
2514
2442
-
Arg
CCT
[ENA]
¢þ
>WENV182849907
OKKV01000042
[OKKV] human gut metagenome; human gut
2536
2461
-
Phe
GAA
[ENA]
¢þ
>WENV182849999
OKKV01001132
[OKKV] human gut metagenome; human gut
2596
2683
+
Ser
TGA
[ENA]
¢þ
>WENV182849978
OKKV01000654
[OKKV] human gut metagenome; human gut
2668
2741
+
Gly
CCC
[ENA]
¢þ
>WENV182850019
OKKV01001765
[OKKV] human gut metagenome; human gut
2753
2828
+
Val
TAC
[ENA]
¢þ
>WENV182849974
OKKV01000575
[OKKV] human gut metagenome; human gut
2769
2842
+
Gly
GCC
[ENA]
¢þ
>WENV182850018
OKKV01001733
[OKKV] human gut metagenome; human gut
2832
2907
+
Asn
GTT
[ENA]
¢þ
>WENV182849975
OKKV01000575
[OKKV] human gut metagenome; human gut
2862
2946
+
Leu
TAA
[ENA]
¢þ
>WENV182849903
OKKV01000036
[OKKV] human gut metagenome; human gut
2882
2969
+
Ser
GGA
[ENA]
¢þ
>WENV182850007
OKKV01001297
[OKKV] human gut metagenome; human gut
2984
3060
+
Asp
GTC
[ENA]
¢þ
>WENV182849950
OKKV01000340
[OKKV] human gut metagenome; human gut
3030
3124
+
SeC
TCA
[ENA]
¢þ
>WENV182849993
OKKV01000980
[OKKV] human gut metagenome; human gut
3239
3311
+
Glu
TTC
[ENA]
¢þ
>WENV182850010
OKKV01001457
[OKKV] human gut metagenome; human gut
3368
3441
+
Phe
GAA
[ENA]
¢þ
>WENV182849982
OKKV01000666
[OKKV] human gut metagenome; human gut
3931
3860
-
Gln
CTG
[ENA]
¢þ
>WENV182849984
OKKV01000703
[OKKV] human gut metagenome; human gut
3982
4056
+
Glu
TTC
[ENA]
¢þ
>WENV182849996
OKKV01001019
[OKKV] human gut metagenome; human gut
3993
3919
-
Arg
TCT
[ENA]
¢þ
>WENV182849981
OKKV01000661
[OKKV] human gut metagenome; human gut
4004
4079
+
Asn
GTT
[ENA]
¢þ
>WENV182849918
OKKV01000084
[OKKV] human gut metagenome; human gut
4014
3932
-
Leu
TAG
[ENA]
¢þ
>WENV182850000
OKKV01001137
[OKKV] human gut metagenome; human gut
4183
4256
+
Gly
CCC
[ENA]
¢þ
>WENV182850006
OKKV01001274
[OKKV] human gut metagenome; human gut
4201
4276
+
Asn
GTT
[ENA]
¢þ
>WENV182850004
OKKV01001245
[OKKV] human gut metagenome; human gut
4255
4181
-
Ile2
CAT
[ENA]
¢þ
>WENV182849961
OKKV01000414
[OKKV] human gut metagenome; human gut
4263
4187
-
Val
GAC
[ENA]
¢þ
>WENV182849960
OKKV01000414
[OKKV] human gut metagenome; human gut
4344
4268
-
Val
GAC
[ENA]
¢þ
>WENV182850001
OKKV01001166
[OKKV] human gut metagenome; human gut
4377
4448
+
Gln
TTG
[ENA]
¢þ
>WENV182849987
OKKV01000796
[OKKV] human gut metagenome; human gut
4640
4725
+
Ser
TGA
[ENA]
¢þ
>WENV182849995
OKKV01001002
[OKKV] human gut metagenome; human gut
4647
4565
-
Leu
TAG
[ENA]
¢þ
>WENV182849919
OKKV01000090
[OKKV] human gut metagenome; human gut
4717
4792
+
Ile2
CAT
[ENA]
¢þ
>WENV182849931
OKKV01000198
[OKKV] human gut metagenome; human gut
4736
4810
+
Thr
TGT
[ENA]
¢þ
>WENV182849916
OKKV01000067
[OKKV] human gut metagenome; human gut
4747
4832
+
Ser
TGA
[ENA]
¢þ
>WENV182849973
OKKV01000566
[OKKV] human gut metagenome; human gut
5415
5332
-
Tyr
GTA
[ENA]
¢þ
>WENV182849979
OKKV01000657
[OKKV] human gut metagenome; human gut
5421
5507
+
Leu
GAG
[ENA]
¢þ
>WENV182849992
OKKV01000893
[OKKV] human gut metagenome; human gut
5835
5908
+
Thr
CGT
[ENA]
¢þ
>WENV182849986
OKKV01000794
[OKKV] human gut metagenome; human gut
5866
5792
-
Pro
GGG
[ENA]
¢þ
>WENV182849938
OKKV01000248
[OKKV] human gut metagenome; human gut
6285
6373
+
Ser
GGA
[ENA]
¢þ
>WENV182849941
OKKV01000254
[OKKV] human gut metagenome; human gut
6646
6563
-
Tyr
GTA
[ENA]
¢þ
>WENV182849990
OKKV01000864
[OKKV] human gut metagenome; human gut
6751
6677
-
Gln
CTG
[ENA]
¢þ
>WENV182849989
OKKV01000864
[OKKV] human gut metagenome; human gut
6862
6788
-
Gln
CTG
[ENA]
¢þ
>WENV182849929
OKKV01000172
[OKKV] human gut metagenome; human gut
6889
6813
-
Arg
TCT
[ENA]
¢þ
>WENV182849914
OKKV01000059
[OKKV] human gut metagenome; human gut
7168
7242
+
Asn
GTT
[ENA]
¢þ
>WENV182849915
OKKV01000059
[OKKV] human gut metagenome; human gut
7248
7323
+
Thr
TGT
[ENA]
¢þ
>WENV182849942
OKKV01000257
[OKKV] human gut metagenome; human gut
7648
7573
-
Ile2
CAT
[ENA]
¢þ
>WENV182849969
OKKV01000452
[OKKV] human gut metagenome; human gut
7670
7598
-
Glu
CTC
[ENA]
¢þ
>WENV182849968
OKKV01000452
[OKKV] human gut metagenome; human gut
7758
7685
-
Lys
CTT
[ENA]
¢þ
>WENV182849977
OKKV01000637
[OKKV] human gut metagenome; human gut
7825
7913
+
Ser
GGA
[ENA]
¢þ
>WENV182849943
OKKV01000262
[OKKV] human gut metagenome; human gut
7840
7764
-
Pro
GGG
[ENA]
¢þ
>WENV182849967
OKKV01000452
[OKKV] human gut metagenome; human gut
7851
7762
-
Ser
GCT
[ENA]
¢þ
>WENV182849900
OKKV01000016
[OKKV] human gut metagenome; human gut
8620
8694
+
Arg
CCT
[ENA]
¢þ
>WENV182849964
OKKV01000422
[OKKV] human gut metagenome; human gut
8688
8599
-
Ser
CGA
[ENA]
¢þ
>WENV182849971
OKKV01000507
[OKKV] human gut metagenome; human gut
9325
9399
+
Phe
GAA
[ENA]
¢þ
>WENV182849955
OKKV01000360
[OKKV] human gut metagenome; human gut
9657
9581
-
Val
GAC
[ENA]
¢þ
>WENV182849963
OKKV01000422
[OKKV] human gut metagenome; human gut
9680
9755
+
Asn
GTT
[ENA]
¢þ
>WENV182849928
OKKV01000159
[OKKV] human gut metagenome; human gut
9728
9799
+
Gln
TTG
[ENA]
¢þ
>WENV182849954
OKKV01000360
[OKKV] human gut metagenome; human gut
9738
9662
-
Val
GAC
[ENA]
¢þ
>WENV182849953
OKKV01000343
[OKKV] human gut metagenome; human gut
9981
9895
-
Leu
TAA
[ENA]
¢þ
>WENV182849952
OKKV01000343
[OKKV] human gut metagenome; human gut
10067
9994
-
Cys
GCA
[ENA]
¢þ
>WENV182849948
OKKV01000300
[OKKV] human gut metagenome; human gut
10139
10213
+
Asp
GTC
[ENA]
¢þ
>WENV182849966
OKKV01000451
[OKKV] human gut metagenome; human gut
10182
10254
+
Glu
TTC
[ENA]
¢þ
>WENV182849951
OKKV01000343
[OKKV] human gut metagenome; human gut
10194
10119
-
Gly
GCC
[ENA]
¢þ
>WENV182849924
OKKV01000115
[OKKV] human gut metagenome; human gut
10220
10146
-
Met
CAT
[ENA]
¢þ
>WENV182849932
OKKV01000228
[OKKV] human gut metagenome; human gut
10521
10448
-
fMet
CAT
[ENA]
¢þ
>WENV182849933
OKKV01000231
[OKKV] human gut metagenome; human gut
10933
11007
+
Thr
TGT
[ENA]
¢þ
>WENV182849934
OKKV01000231
[OKKV] human gut metagenome; human gut
11131
11214
+
Tyr
GTA
[ENA]
¢þ
>WENV182849935
OKKV01000231
[OKKV] human gut metagenome; human gut
11231
11303
+
Thr
GGT
[ENA]
¢þ
>WENV182849965
OKKV01000444
[OKKV] human gut metagenome; human gut
11367
11441
+
Asn
GTT
[ENA]
¢þ
>WENV182849949
OKKV01000305
[OKKV] human gut metagenome; human gut
11834
11759
-
Thr
CGT
[ENA]
¢þ
>WENV182849936
OKKV01000231
[OKKV] human gut metagenome; human gut
12594
12667
+
Trp
CCA
[ENA]
¢þ
>WENV182849913
OKKV01000056
[OKKV] human gut metagenome; human gut
13563
13488
-
Phe
GAA
[ENA]
¢þ
>WENV182849944
OKKV01000268
[OKKV] human gut metagenome; human gut
14514
14587
+
Cys
GCA
[ENA]
¢þ
>WENV182849947
OKKV01000286
[OKKV] human gut metagenome; human gut
14679
14605
-
Gln
CTG
[ENA]
¢þ
>WENV182849946
OKKV01000286
[OKKV] human gut metagenome; human gut
14791
14717
-
Gln
CTG
[ENA]
¢þ
>WENV182849895
OKKV01000007
[OKKV] human gut metagenome; human gut
16995
16922
-
Gly
CCC
[ENA]
¢þ
>WENV182849906
OKKV01000041
[OKKV] human gut metagenome; human gut
18696
18767
+
Gln
CTG
[ENA]
¢þ
>WENV182849927
OKKV01000135
[OKKV] human gut metagenome; human gut
19996
20080
+
Leu
CAA
[ENA]
¢þ
>WENV182849912
OKKV01000053
[OKKV] human gut metagenome; human gut
20146
20073
-
Lys
CTT
[ENA]
¢þ
>WENV182849926
OKKV01000132
[OKKV] human gut metagenome; human gut
20877
20971
+
SeC
TCA
[ENA]
¢þ
>WENV182849922
OKKV01000098
[OKKV] human gut metagenome; human gut
21266
21190
-
Lys
TTT
[ENA]
¢þ
>WENV182849921
OKKV01000098
[OKKV] human gut metagenome; human gut
21344
21269
-
Ile2
CAT
[ENA]
¢þ
>WENV182849923
OKKV01000112
[OKKV] human gut metagenome; human gut
21879
21953
+
Ile2
CAT
[ENA]
¢þ
>WENV182849911
OKKV01000050
[OKKV] human gut metagenome; human gut
21929
21854
-
Pro
GGG
[ENA]
¢þ
>WENV182849908
OKKV01000043
[OKKV] human gut metagenome; human gut
22955
22880
-
Phe
GAA
[ENA]
¢þ
>WENV182849925
OKKV01000130
[OKKV] human gut metagenome; human gut
23189
23263
+
Met
CAT
[ENA]
¢þ
>WENV182849920
OKKV01000091
[OKKV] human gut metagenome; human gut
23302
23229
-
Thr
CGT
[ENA]
¢þ
>WENV182849902
OKKV01000028
[OKKV] human gut metagenome; human gut
26613
26537
-
Pro
CGG
[ENA]
¢þ
>WENV182849905
OKKV01000040
[OKKV] human gut metagenome; human gut
26613
26538
-
Gly
GCC
[ENA]
¢þ
>WENV182849904
OKKV01000040
[OKKV] human gut metagenome; human gut
26844
26769
-
Gly
GCC
[ENA]
¢þ
>WENV182849909
OKKV01000045
[OKKV] human gut metagenome; human gut
27336
27252
-
Leu
CAA
[ENA]
¢þ
>WENV182849910
OKKV01000046
[OKKV] human gut metagenome; human gut
29204
29130
-
Thr
TGT
[ENA]
¢þ
>WENV182849896
OKKV01000015
[OKKV] human gut metagenome; human gut
31065
31141
+
Arg
CCG
[ENA]
¢þ
>WENV182849897
OKKV01000015
[OKKV] human gut metagenome; human gut
31200
31275
+
His
GTG
[ENA]
¢þ
>WENV182849898
OKKV01000015
[OKKV] human gut metagenome; human gut
31296
31382
+
Leu
CAG
[ENA]
¢þ
>WENV182849899
OKKV01000015
[OKKV] human gut metagenome; human gut
31425
31501
+
Pro
TGG
[ENA]
¢þ
>WENV182849893
OKKV01000002
[OKKV] human gut metagenome; human gut
41913
41989
+
Arg
TCT
[ENA]
¢þ
>WENV182849901
OKKV01000019
[OKKV] human gut metagenome; human gut
45544
45620
+
fMet
CAT
[ENA]
¢þ
>WENV182849894
OKKV01000005
[OKKV] human gut metagenome; human gut
49982
49895
-
Ser
TGA
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK