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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA gene List
[OKLA] human gut metagenome; human gut
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182850355
OKLA01000447
[OKLA] human gut metagenome; human gut
62
136
+
Asp
GTC
[ENA]
¢þ
>WENV182850346
OKLA01000232
[OKLA] human gut metagenome; human gut
68
142
+
Val
TAC
[ENA]
¢þ
>WENV182850367
OKLA01001200
[OKLA] human gut metagenome; human gut
86
162
+
Pro
TGG
[ENA]
¢þ
>WENV182850356
OKLA01000447
[OKLA] human gut metagenome; human gut
138
212
+
Phe
GAA
[ENA]
¢þ
>WENV182850347
OKLA01000232
[OKLA] human gut metagenome; human gut
144
218
+
Lys
TTT
[ENA]
¢þ
>WENV182850377
OKLA01002676
[OKLA] human gut metagenome; human gut
145
69
-
Pro
GGG
[ENA]
¢þ
>WENV182850374
OKLA01001754
[OKLA] human gut metagenome; human gut
151
77
-
Gln
TTG
[ENA]
¢þ
>WENV182850375
OKLA01001937
[OKLA] human gut metagenome; human gut
174
102
-
Gln
CTG
[ENA]
¢þ
>WENV182850357
OKLA01000447
[OKLA] human gut metagenome; human gut
216
286
+
Gly
TCC
[ENA]
¢þ
>WENV182850348
OKLA01000232
[OKLA] human gut metagenome; human gut
224
307
+
Leu
TAG
[ENA]
¢þ
>WENV182850365
OKLA01001105
[OKLA] human gut metagenome; human gut
262
186
-
Arg
TCT
[ENA]
¢þ
>WENV182850373
OKLA01001754
[OKLA] human gut metagenome; human gut
271
187
-
Leu
TAG
[ENA]
¢þ
>WENV182850358
OKLA01000447
[OKLA] human gut metagenome; human gut
298
373
+
Ile
GAT
[ENA]
¢þ
>WENV182850376
OKLA01001991
[OKLA] human gut metagenome; human gut
309
384
+
Phe
GAA
[ENA]
¢þ
>WENV182850349
OKLA01000232
[OKLA] human gut metagenome; human gut
323
398
+
Thr
TGT
[ENA]
¢þ
>WENV182850372
OKLA01001754
[OKLA] human gut metagenome; human gut
356
280
-
Met
CAT
[ENA]
¢þ
>WENV182850359
OKLA01000447
[OKLA] human gut metagenome; human gut
383
456
+
Glu
TTC
[ENA]
¢þ
>WENV182850350
OKLA01000232
[OKLA] human gut metagenome; human gut
408
479
+
Gly
GCC
[ENA]
¢þ
>WENV182850371
OKLA01001539
[OKLA] human gut metagenome; human gut
420
336
-
Leu
CAA
[ENA]
¢þ
>WENV182850370
OKLA01001461
[OKLA] human gut metagenome; human gut
442
367
-
Thr
GGT
[ENA]
¢þ
>WENV182850368
OKLA01001249
[OKLA] human gut metagenome; human gut
451
535
+
Tyr
GTA
[ENA]
¢þ
>WENV182850351
OKLA01000232
[OKLA] human gut metagenome; human gut
496
581
+
Leu
TAA
[ENA]
¢þ
>WENV182850369
OKLA01001461
[OKLA] human gut metagenome; human gut
522
448
-
Gly
TCC
[ENA]
¢þ
>WENV182850366
OKLA01001168
[OKLA] human gut metagenome; human gut
558
483
-
Asn
GTT
[ENA]
¢þ
>WENV182850378
OKLA01003560
[OKLA] human gut metagenome; human gut
582
510
-
Thr
CGT
[ENA]
¢þ
>WENV182850352
OKLA01000232
[OKLA] human gut metagenome; human gut
591
667
+
Arg
ACG
[ENA]
¢þ
>WENV182850342
OKLA01000125
[OKLA] human gut metagenome; human gut
689
614
-
Ala
GGC
[ENA]
¢þ
>WENV182850364
OKLA01001055
[OKLA] human gut metagenome; human gut
1035
1120
+
Leu
CAG
[ENA]
¢þ
>WENV182850360
OKLA01000484
[OKLA] human gut metagenome; human gut
1433
1360
-
Gly
CCC
[ENA]
¢þ
>WENV182850339
OKLA01000091
[OKLA] human gut metagenome; human gut
1585
1491
-
SeC
TCA
[ENA]
¢þ
>WENV182850343
OKLA01000220
[OKLA] human gut metagenome; human gut
2074
2149
+
Gly
GCC
[ENA]
¢þ
>WENV182850344
OKLA01000220
[OKLA] human gut metagenome; human gut
2188
2261
+
Cys
GCA
[ENA]
¢þ
>WENV182850353
OKLA01000290
[OKLA] human gut metagenome; human gut
2219
2145
-
Glu
TTC
[ENA]
¢þ
>WENV182850345
OKLA01000220
[OKLA] human gut metagenome; human gut
2275
2361
+
Leu
TAA
[ENA]
¢þ
>WENV182850363
OKLA01000978
[OKLA] human gut metagenome; human gut
2297
2224
-
Arg
CCG
[ENA]
¢þ
>WENV182850362
OKLA01000742
[OKLA] human gut metagenome; human gut
2350
2263
-
Ser
GGA
[ENA]
¢þ
>WENV182850337
OKLA01000075
[OKLA] human gut metagenome; human gut
2368
2460
+
Ser
GCT
[ENA]
¢þ
>WENV182850354
OKLA01000325
[OKLA] human gut metagenome; human gut
2420
2344
-
fMet
CAT
[ENA]
¢þ
>WENV182850338
OKLA01000075
[OKLA] human gut metagenome; human gut
2465
2541
+
Arg
ACG
[ENA]
¢þ
>WENV182850361
OKLA01000655
[OKLA] human gut metagenome; human gut
2663
2749
+
Leu
CAG
[ENA]
¢þ
>WENV182850340
OKLA01000125
[OKLA] human gut metagenome; human gut
3398
3473
+
Val
TAC
[ENA]
¢þ
>WENV182850341
OKLA01000125
[OKLA] human gut metagenome; human gut
3478
3553
+
Lys
TTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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