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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKLE] human gut metagenome; human gut
HIT:
105 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182850605
OKLE01000418
[OKLE] human gut metagenome; human gut
59
134
+
Asn
GTT
[ENA]
¢þ
>WENV182850591
OKLE01000132
[OKLE] human gut metagenome; human gut
68
140
+
Ala
TGC
[ENA]
¢þ
>WENV182850601
OKLE01000198
[OKLE] human gut metagenome; human gut
77
147
+
Cys
GCA
[ENA]
¢þ
>WENV182850602
OKLE01000198
[OKLE] human gut metagenome; human gut
160
245
+
Leu
CAA
[ENA]
¢þ
>WENV182850592
OKLE01000132
[OKLE] human gut metagenome; human gut
162
237
+
Met
CAT
[ENA]
¢þ
>WENV182850593
OKLE01000132
[OKLE] human gut metagenome; human gut
256
331
+
Ile2
CAT
[ENA]
¢þ
>WENV182850594
OKLE01000132
[OKLE] human gut metagenome; human gut
364
453
+
Ser
TGA
[ENA]
¢þ
>WENV182850609
OKLE01000987
[OKLE] human gut metagenome; human gut
382
310
-
Thr
CGT
[ENA]
¢þ
>WENV182850608
OKLE01000906
[OKLE] human gut metagenome; human gut
408
337
-
Trp
CCA
[ENA]
¢þ
>WENV182850595
OKLE01000132
[OKLE] human gut metagenome; human gut
486
561
+
fMet
CAT
[ENA]
¢þ
>WENV182850596
OKLE01000132
[OKLE] human gut metagenome; human gut
599
675
+
Asp
GTC
[ENA]
¢þ
>WENV182850597
OKLE01000132
[OKLE] human gut metagenome; human gut
677
747
+
Gly
TCC
[ENA]
¢þ
>WENV182850607
OKLE01000859
[OKLE] human gut metagenome; human gut
682
607
-
Arg
CCT
[ENA]
¢þ
>WENV182850604
OKLE01000387
[OKLE] human gut metagenome; human gut
686
611
-
Arg
TCT
[ENA]
¢þ
>WENV182850598
OKLE01000132
[OKLE] human gut metagenome; human gut
756
831
+
Ile
GAT
[ENA]
¢þ
>WENV182850564
OKLE01000063
[OKLE] human gut metagenome; human gut
794
867
+
Thr
GGT
[ENA]
¢þ
>WENV182850599
OKLE01000132
[OKLE] human gut metagenome; human gut
844
917
+
Glu
TTC
[ENA]
¢þ
>WENV182850562
OKLE01000058
[OKLE] human gut metagenome; human gut
982
907
-
Asn
GTT
[ENA]
¢þ
>WENV182850606
OKLE01000444
[OKLE] human gut metagenome; human gut
1771
1685
-
Leu
GAG
[ENA]
¢þ
>WENV182850561
OKLE01000058
[OKLE] human gut metagenome; human gut
1974
2063
+
Ser
CGA
[ENA]
¢þ
>WENV182850603
OKLE01000373
[OKLE] human gut metagenome; human gut
2545
2634
+
Ser
CGA
[ENA]
¢þ
>WENV182850574
OKLE01000082
[OKLE] human gut metagenome; human gut
2722
2797
+
Ala
GGC
[ENA]
¢þ
>WENV182850575
OKLE01000082
[OKLE] human gut metagenome; human gut
2837
2912
+
Ala
GGC
[ENA]
¢þ
>WENV182850568
OKLE01000079
[OKLE] human gut metagenome; human gut
2949
3026
+
Ile2
CAT
[ENA]
¢þ
>WENV182850569
OKLE01000079
[OKLE] human gut metagenome; human gut
3032
3108
+
Arg
TCT
[ENA]
¢þ
>WENV182850582
OKLE01000119
[OKLE] human gut metagenome; human gut
3354
3428
+
Val
TAC
[ENA]
¢þ
>WENV182850583
OKLE01000119
[OKLE] human gut metagenome; human gut
3433
3507
+
Lys
TTT
[ENA]
¢þ
>WENV182850590
OKLE01000120
[OKLE] human gut metagenome; human gut
3498
3422
-
Asp
GTC
[ENA]
¢þ
>WENV182850584
OKLE01000119
[OKLE] human gut metagenome; human gut
3522
3605
+
Leu
TAG
[ENA]
¢þ
>WENV182850576
OKLE01000083
[OKLE] human gut metagenome; human gut
3559
3633
+
Asn
GTT
[ENA]
¢þ
>WENV182850585
OKLE01000119
[OKLE] human gut metagenome; human gut
3611
3686
+
Thr
TGT
[ENA]
¢þ
>WENV182850577
OKLE01000083
[OKLE] human gut metagenome; human gut
3639
3715
+
Arg
TCT
[ENA]
¢þ
>WENV182850586
OKLE01000119
[OKLE] human gut metagenome; human gut
3691
3762
+
Gly
GCC
[ENA]
¢þ
>WENV182850587
OKLE01000119
[OKLE] human gut metagenome; human gut
3778
3863
+
Leu
TAA
[ENA]
¢þ
>WENV182850588
OKLE01000119
[OKLE] human gut metagenome; human gut
3878
3951
+
Arg
ACG
[ENA]
¢þ
>WENV182850600
OKLE01000150
[OKLE] human gut metagenome; human gut
3924
3851
-
Arg
CCG
[ENA]
¢þ
>WENV182850589
OKLE01000119
[OKLE] human gut metagenome; human gut
3963
4036
+
Pro
TGG
[ENA]
¢þ
>WENV182850563
OKLE01000062
[OKLE] human gut metagenome; human gut
5906
5831
-
Thr
CGT
[ENA]
¢þ
>WENV182850573
OKLE01000080
[OKLE] human gut metagenome; human gut
7573
7487
-
Leu
TAA
[ENA]
¢þ
>WENV182850572
OKLE01000080
[OKLE] human gut metagenome; human gut
7659
7586
-
Cys
GCA
[ENA]
¢þ
>WENV182850571
OKLE01000080
[OKLE] human gut metagenome; human gut
7775
7700
-
Gly
GCC
[ENA]
¢þ
>WENV182850581
OKLE01000104
[OKLE] human gut metagenome; human gut
9206
9131
-
Asn
GTT
[ENA]
¢þ
>WENV182850523
OKLE01000006
[OKLE] human gut metagenome; human gut
9449
9525
+
Asp
GTC
[ENA]
¢þ
>WENV182850580
OKLE01000104
[OKLE] human gut metagenome; human gut
11615
11540
-
Asn
GTT
[ENA]
¢þ
>WENV182850579
OKLE01000104
[OKLE] human gut metagenome; human gut
13364
13439
+
Asn
GTT
[ENA]
¢þ
>WENV182850578
OKLE01000094
[OKLE] human gut metagenome; human gut
18319
18394
+
Lys
TTT
[ENA]
¢þ
>WENV182850543
OKLE01000022
[OKLE] human gut metagenome; human gut
20326
20252
-
Gly
TCC
[ENA]
¢þ
>WENV182850542
OKLE01000022
[OKLE] human gut metagenome; human gut
20405
20330
-
Thr
TGT
[ENA]
¢þ
>WENV182850565
OKLE01000063
[OKLE] human gut metagenome; human gut
27840
27769
-
Cys
GCA
[ENA]
¢þ
>WENV182850552
OKLE01000033
[OKLE] human gut metagenome; human gut
28921
28996
+
Phe
GAA
[ENA]
¢þ
>WENV182850570
OKLE01000080
[OKLE] human gut metagenome; human gut
28971
28882
-
Ser
CGA
[ENA]
¢þ
>WENV182850544
OKLE01000027
[OKLE] human gut metagenome; human gut
31529
31623
+
SeC
TCA
[ENA]
¢þ
>WENV182850537
OKLE01000013
[OKLE] human gut metagenome; human gut
33347
33422
+
Ile2
CAT
[ENA]
¢þ
>WENV182850566
OKLE01000064
[OKLE] human gut metagenome; human gut
33399
33486
+
Ser
GGA
[ENA]
¢þ
>WENV182850518
OKLE01000004
[OKLE] human gut metagenome; human gut
35540
35465
-
Phe
GAA
[ENA]
¢þ
>WENV182850567
OKLE01000065
[OKLE] human gut metagenome; human gut
41013
41088
+
Phe
GAA
[ENA]
¢þ
>WENV182850551
OKLE01000031
[OKLE] human gut metagenome; human gut
41589
41513
-
Pro
CGG
[ENA]
¢þ
>WENV182850559
OKLE01000041
[OKLE] human gut metagenome; human gut
47845
47939
+
SeC
TCA
[ENA]
¢þ
>WENV182850556
OKLE01000039
[OKLE] human gut metagenome; human gut
47848
47772
-
Pro
TGG
[ENA]
¢þ
>WENV182850555
OKLE01000039
[OKLE] human gut metagenome; human gut
47977
47891
-
Leu
CAG
[ENA]
¢þ
>WENV182850554
OKLE01000039
[OKLE] human gut metagenome; human gut
48076
48001
-
His
GTG
[ENA]
¢þ
>WENV182850553
OKLE01000039
[OKLE] human gut metagenome; human gut
48211
48135
-
Arg
CCG
[ENA]
¢þ
>WENV182850558
OKLE01000040
[OKLE] human gut metagenome; human gut
52828
52752
-
Val
GAC
[ENA]
¢þ
>WENV182850557
OKLE01000040
[OKLE] human gut metagenome; human gut
52909
52833
-
Val
GAC
[ENA]
¢þ
>WENV182850522
OKLE01000005
[OKLE] human gut metagenome; human gut
53883
53807
-
Pro
GGG
[ENA]
¢þ
>WENV182850540
OKLE01000021
[OKLE] human gut metagenome; human gut
53919
54006
+
Ser
GGA
[ENA]
¢þ
>WENV182850527
OKLE01000009
[OKLE] human gut metagenome; human gut
55724
55800
+
Pro
GGG
[ENA]
¢þ
>WENV182850525
OKLE01000006
[OKLE] human gut metagenome; human gut
58324
58249
-
Thr
CGT
[ENA]
¢þ
>WENV182850560
OKLE01000046
[OKLE] human gut metagenome; human gut
69668
69740
+
Arg
CCT
[ENA]
¢þ
>WENV182850550
OKLE01000029
[OKLE] human gut metagenome; human gut
69893
69980
+
Ser
TGA
[ENA]
¢þ
>WENV182850549
OKLE01000028
[OKLE] human gut metagenome; human gut
78808
78732
-
Pro
TGG
[ENA]
¢þ
>WENV182850548
OKLE01000028
[OKLE] human gut metagenome; human gut
78937
78851
-
Leu
CAG
[ENA]
¢þ
>WENV182850547
OKLE01000028
[OKLE] human gut metagenome; human gut
79033
78958
-
His
GTG
[ENA]
¢þ
>WENV182850546
OKLE01000028
[OKLE] human gut metagenome; human gut
79168
79092
-
Arg
CCG
[ENA]
¢þ
>WENV182850507
OKLE01000002
[OKLE] human gut metagenome; human gut
99446
99532
+
Leu
GAG
[ENA]
¢þ
>WENV182850508
OKLE01000002
[OKLE] human gut metagenome; human gut
103313
103389
+
fMet
CAT
[ENA]
¢þ
>WENV182850541
OKLE01000021
[OKLE] human gut metagenome; human gut
106032
106119
+
Ser
TGA
[ENA]
¢þ
>WENV182850545
OKLE01000028
[OKLE] human gut metagenome; human gut
113712
113637
-
Trp
CCA
[ENA]
¢þ
>WENV182850514
OKLE01000004
[OKLE] human gut metagenome; human gut
145559
145632
+
Gly
CCC
[ENA]
¢þ
>WENV182850510
OKLE01000003
[OKLE] human gut metagenome; human gut
148587
148673
+
Leu
CAG
[ENA]
¢þ
>WENV182850511
OKLE01000003
[OKLE] human gut metagenome; human gut
148702
148788
+
Leu
CAG
[ENA]
¢þ
>WENV182850512
OKLE01000003
[OKLE] human gut metagenome; human gut
148823
148909
+
Leu
CAG
[ENA]
¢þ
>WENV182850532
OKLE01000010
[OKLE] human gut metagenome; human gut
151847
151774
-
Gly
CCC
[ENA]
¢þ
>WENV182850539
OKLE01000013
[OKLE] human gut metagenome; human gut
153319
153243
-
fMet
CAT
[ENA]
¢þ
>WENV182850538
OKLE01000013
[OKLE] human gut metagenome; human gut
157336
157250
-
Leu
GAG
[ENA]
¢þ
>WENV182850533
OKLE01000011
[OKLE] human gut metagenome; human gut
167909
167985
+
Arg
TCT
[ENA]
¢þ
>WENV182850506
OKLE01000001
[OKLE] human gut metagenome; human gut
182592
182516
-
Val
GAC
[ENA]
¢þ
>WENV182850505
OKLE01000001
[OKLE] human gut metagenome; human gut
182673
182597
-
Val
GAC
[ENA]
¢þ
>WENV182850509
OKLE01000002
[OKLE] human gut metagenome; human gut
199039
198964
-
Ile2
CAT
[ENA]
¢þ
>WENV182850526
OKLE01000007
[OKLE] human gut metagenome; human gut
202248
202172
-
Pro
CGG
[ENA]
¢þ
>WENV182850517
OKLE01000004
[OKLE] human gut metagenome; human gut
218038
217962
-
fMet
CAT
[ENA]
¢þ
>WENV182850516
OKLE01000004
[OKLE] human gut metagenome; human gut
218148
218072
-
fMet
CAT
[ENA]
¢þ
>WENV182850528
OKLE01000009
[OKLE] human gut metagenome; human gut
225702
225776
+
Arg
CCT
[ENA]
¢þ
>WENV182850513
OKLE01000003
[OKLE] human gut metagenome; human gut
228632
228548
-
Leu
CAA
[ENA]
¢þ
>WENV182850531
OKLE01000010
[OKLE] human gut metagenome; human gut
236359
236434
+
Phe
GAA
[ENA]
¢þ
>WENV182850536
OKLE01000011
[OKLE] human gut metagenome; human gut
270215
270141
-
Gln
CTG
[ENA]
¢þ
>WENV182850535
OKLE01000011
[OKLE] human gut metagenome; human gut
270327
270253
-
Gln
CTG
[ENA]
¢þ
>WENV182850534
OKLE01000011
[OKLE] human gut metagenome; human gut
270452
270376
-
Met
CAT
[ENA]
¢þ
>WENV182850524
OKLE01000006
[OKLE] human gut metagenome; human gut
272616
272692
+
Arg
TCT
[ENA]
¢þ
>WENV182850530
OKLE01000009
[OKLE] human gut metagenome; human gut
278127
278052
-
Ala
GGC
[ENA]
¢þ
>WENV182850529
OKLE01000009
[OKLE] human gut metagenome; human gut
278242
278167
-
Ala
GGC
[ENA]
¢þ
>WENV182850521
OKLE01000005
[OKLE] human gut metagenome; human gut
296863
296788
-
Asn
GTT
[ENA]
¢þ
>WENV182850519
OKLE01000005
[OKLE] human gut metagenome; human gut
298621
298696
+
Asn
GTT
[ENA]
¢þ
>WENV182850520
OKLE01000005
[OKLE] human gut metagenome; human gut
307617
307542
-
Asn
GTT
[ENA]
¢þ
>WENV182850515
OKLE01000004
[OKLE] human gut metagenome; human gut
339117
339209
+
Ser
GCT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK