This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA gene List
[OKLZ] human gut metagenome; human gut
HIT:
121 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182852647
OKLZ01001610
[OKLZ] human gut metagenome; human gut
4
79
+
Asp
GTC
[ENA]
¢þ
>WENV182852590
OKLZ01000181
[OKLZ] human gut metagenome; human gut
59
133
+
Lys
TTT
[ENA]
¢þ
>WENV182852573
OKLZ01000029
[OKLZ] human gut metagenome; human gut
78
2
-
Met
CAT
[ENA]
¢þ
>WENV182852574
OKLZ01000032
[OKLZ] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182852648
OKLZ01001610
[OKLZ] human gut metagenome; human gut
101
176
+
Phe
GAA
[ENA]
¢þ
>WENV182852656
OKLZ01004179
[OKLZ] human gut metagenome; human gut
102
178
+
Ile
GAT
[ENA]
¢þ
>WENV182852562
OKLZ01000023
[OKLZ] human gut metagenome; human gut
105
181
+
Asp
GTC
[ENA]
¢þ
>WENV182852654
OKLZ01003588
[OKLZ] human gut metagenome; human gut
121
50
-
Arg
CCG
[ENA]
¢þ
>WENV182852642
OKLZ01001212
[OKLZ] human gut metagenome; human gut
135
62
-
Arg
ACG
[ENA]
¢þ
>WENV182852625
OKLZ01001030
[OKLZ] human gut metagenome; human gut
140
65
-
Lys
TTT
[ENA]
¢þ
>WENV182852591
OKLZ01000181
[OKLZ] human gut metagenome; human gut
148
231
+
Leu
TAG
[ENA]
¢þ
>WENV182852652
OKLZ01003101
[OKLZ] human gut metagenome; human gut
160
70
-
Ser
GCT
[ENA]
¢þ
>WENV182852572
OKLZ01000029
[OKLZ] human gut metagenome; human gut
176
102
-
Gln
TTG
[ENA]
¢þ
>WENV182852649
OKLZ01001610
[OKLZ] human gut metagenome; human gut
189
274
+
Leu
GAG
[ENA]
¢þ
>WENV182852624
OKLZ01001030
[OKLZ] human gut metagenome; human gut
221
147
-
Gln
TTG
[ENA]
¢þ
>WENV182852641
OKLZ01001212
[OKLZ] human gut metagenome; human gut
235
150
-
Leu
TAA
[ENA]
¢þ
>WENV182852609
OKLZ01000618
[OKLZ] human gut metagenome; human gut
235
161
-
Arg
CCT
[ENA]
¢þ
>WENV182852592
OKLZ01000181
[OKLZ] human gut metagenome; human gut
237
312
+
Thr
TGT
[ENA]
¢þ
>WENV182852560
OKLZ01000019
[OKLZ] human gut metagenome; human gut
243
319
+
Arg
ACG
[ENA]
¢þ
>WENV182852653
OKLZ01003131
[OKLZ] human gut metagenome; human gut
263
351
+
Ser
TGA
[ENA]
¢þ
>WENV182852657
OKLZ01004179
[OKLZ] human gut metagenome; human gut
285
360
+
Ala
TGC
[ENA]
¢þ
>WENV182852571
OKLZ01000029
[OKLZ] human gut metagenome; human gut
287
213
-
Gln
TTG
[ENA]
¢þ
>WENV182852623
OKLZ01001030
[OKLZ] human gut metagenome; human gut
302
227
-
His
GTG
[ENA]
¢þ
>WENV182852640
OKLZ01001212
[OKLZ] human gut metagenome; human gut
313
242
-
Gly
GCC
[ENA]
¢þ
>WENV182852593
OKLZ01000181
[OKLZ] human gut metagenome; human gut
317
388
+
Gly
GCC
[ENA]
¢þ
>WENV182852603
OKLZ01000354
[OKLZ] human gut metagenome; human gut
334
259
-
Arg
CCT
[ENA]
¢þ
>WENV182852622
OKLZ01001030
[OKLZ] human gut metagenome; human gut
383
307
-
Arg
TCT
[ENA]
¢þ
>WENV182852658
OKLZ01004497
[OKLZ] human gut metagenome; human gut
388
473
+
Leu
CAG
[ENA]
¢þ
>WENV182852589
OKLZ01000110
[OKLZ] human gut metagenome; human gut
390
315
-
Thr
GGT
[ENA]
¢þ
>WENV182852626
OKLZ01001151
[OKLZ] human gut metagenome; human gut
390
464
+
Val
TAC
[ENA]
¢þ
>WENV182852639
OKLZ01001212
[OKLZ] human gut metagenome; human gut
392
320
-
Thr
TGT
[ENA]
¢þ
>WENV182852570
OKLZ01000029
[OKLZ] human gut metagenome; human gut
395
311
-
Leu
TAG
[ENA]
¢þ
>WENV182852594
OKLZ01000181
[OKLZ] human gut metagenome; human gut
404
489
+
Leu
TAA
[ENA]
¢þ
>WENV182852655
OKLZ01003789
[OKLZ] human gut metagenome; human gut
442
352
-
Ser
GGA
[ENA]
¢þ
>WENV182852643
OKLZ01001238
[OKLZ] human gut metagenome; human gut
447
536
+
Ser
CGA
[ENA]
¢þ
>WENV182852644
OKLZ01001249
[OKLZ] human gut metagenome; human gut
462
389
-
Arg
CCG
[ENA]
¢þ
>WENV182852588
OKLZ01000110
[OKLZ] human gut metagenome; human gut
470
396
-
Gly
TCC
[ENA]
¢þ
>WENV182852627
OKLZ01001151
[OKLZ] human gut metagenome; human gut
474
549
+
Asp
GTC
[ENA]
¢þ
>WENV182852569
OKLZ01000029
[OKLZ] human gut metagenome; human gut
480
404
-
Met
CAT
[ENA]
¢þ
>WENV182852638
OKLZ01001212
[OKLZ] human gut metagenome; human gut
487
404
-
Leu
TAG
[ENA]
¢þ
>WENV182852621
OKLZ01001030
[OKLZ] human gut metagenome; human gut
492
419
-
Gly
TCC
[ENA]
¢þ
>WENV182852561
OKLZ01000019
[OKLZ] human gut metagenome; human gut
498
574
+
Arg
ACG
[ENA]
¢þ
>WENV182852595
OKLZ01000181
[OKLZ] human gut metagenome; human gut
504
577
+
Arg
ACG
[ENA]
¢þ
>WENV182852646
OKLZ01001536
[OKLZ] human gut metagenome; human gut
529
435
-
SeC
TCA
[ENA]
¢þ
>WENV182852651
OKLZ01002465
[OKLZ] human gut metagenome; human gut
561
631
+
Cys
GCA
[ENA]
¢þ
>WENV182852637
OKLZ01001212
[OKLZ] human gut metagenome; human gut
564
492
-
Lys
TTT
[ENA]
¢þ
>WENV182852620
OKLZ01001030
[OKLZ] human gut metagenome; human gut
571
497
-
Gly
GCC
[ENA]
¢þ
>WENV182852596
OKLZ01000181
[OKLZ] human gut metagenome; human gut
589
662
+
Pro
TGG
[ENA]
¢þ
>WENV182852628
OKLZ01001151
[OKLZ] human gut metagenome; human gut
595
667
+
Phe
GAA
[ENA]
¢þ
>WENV182852636
OKLZ01001212
[OKLZ] human gut metagenome; human gut
656
584
-
Asp
GTC
[ENA]
¢þ
>WENV182852587
OKLZ01000110
[OKLZ] human gut metagenome; human gut
670
586
-
Tyr
GTA
[ENA]
¢þ
>WENV182852629
OKLZ01001151
[OKLZ] human gut metagenome; human gut
672
754
+
Tyr
GTA
[ENA]
¢þ
>WENV182852597
OKLZ01000181
[OKLZ] human gut metagenome; human gut
675
749
+
Ala
TGC
[ENA]
¢þ
>WENV182852619
OKLZ01001030
[OKLZ] human gut metagenome; human gut
681
598
-
Leu
TAG
[ENA]
¢þ
>WENV182852650
OKLZ01002387
[OKLZ] human gut metagenome; human gut
686
774
+
Leu
TAA
[ENA]
¢þ
>WENV182852584
OKLZ01000069
[OKLZ] human gut metagenome; human gut
705
781
+
Pro
CGG
[ENA]
¢þ
>WENV182852634
OKLZ01001164
[OKLZ] human gut metagenome; human gut
727
637
-
Ser
CGA
[ENA]
¢þ
>WENV182852635
OKLZ01001212
[OKLZ] human gut metagenome; human gut
731
659
-
Val
TAC
[ENA]
¢þ
>WENV182852586
OKLZ01000110
[OKLZ] human gut metagenome; human gut
756
681
-
Thr
TGT
[ENA]
¢þ
>WENV182852630
OKLZ01001151
[OKLZ] human gut metagenome; human gut
758
831
+
Trp
CCA
[ENA]
¢þ
>WENV182852618
OKLZ01001030
[OKLZ] human gut metagenome; human gut
763
688
-
Lys
TTT
[ENA]
¢þ
>WENV182852645
OKLZ01001308
[OKLZ] human gut metagenome; human gut
795
720
-
Arg
TCT
[ENA]
¢þ
>WENV182852613
OKLZ01000867
[OKLZ] human gut metagenome; human gut
821
746
-
Arg
TCT
[ENA]
¢þ
>WENV182852617
OKLZ01001030
[OKLZ] human gut metagenome; human gut
844
770
-
Gln
TTG
[ENA]
¢þ
>WENV182852631
OKLZ01001151
[OKLZ] human gut metagenome; human gut
868
941
+
His
GTG
[ENA]
¢þ
>WENV182852616
OKLZ01001030
[OKLZ] human gut metagenome; human gut
941
866
-
Lys
CTT
[ENA]
¢þ
>WENV182852632
OKLZ01001151
[OKLZ] human gut metagenome; human gut
954
1027
+
Gln
TTG
[ENA]
¢þ
>WENV182852610
OKLZ01000867
[OKLZ] human gut metagenome; human gut
1006
1079
+
Glu
TTC
[ENA]
¢þ
>WENV182852615
OKLZ01001030
[OKLZ] human gut metagenome; human gut
1020
947
-
Gly
TCC
[ENA]
¢þ
>WENV182852633
OKLZ01001151
[OKLZ] human gut metagenome; human gut
1052
1122
+
Cys
GCA
[ENA]
¢þ
>WENV182852611
OKLZ01000867
[OKLZ] human gut metagenome; human gut
1087
1176
+
Ser
TGA
[ENA]
¢þ
>WENV182852614
OKLZ01001030
[OKLZ] human gut metagenome; human gut
1122
1048
-
Gly
GCC
[ENA]
¢þ
>WENV182852612
OKLZ01000867
[OKLZ] human gut metagenome; human gut
1186
1259
+
fMet
CAT
[ENA]
¢þ
>WENV182852608
OKLZ01000531
[OKLZ] human gut metagenome; human gut
1417
1344
-
Gln
TTG
[ENA]
¢þ
>WENV182852607
OKLZ01000531
[OKLZ] human gut metagenome; human gut
1566
1484
-
Tyr
GTA
[ENA]
¢þ
>WENV182852606
OKLZ01000409
[OKLZ] human gut metagenome; human gut
1570
1494
-
Met
CAT
[ENA]
¢þ
>WENV182852605
OKLZ01000409
[OKLZ] human gut metagenome; human gut
1651
1576
-
Thr
GGT
[ENA]
¢þ
>WENV182852604
OKLZ01000409
[OKLZ] human gut metagenome; human gut
1758
1683
-
fMet
CAT
[ENA]
¢þ
>WENV182852598
OKLZ01000194
[OKLZ] human gut metagenome; human gut
2118
2032
-
Ser
GGA
[ENA]
¢þ
>WENV182852599
OKLZ01000239
[OKLZ] human gut metagenome; human gut
2123
2199
+
Ile2
CAT
[ENA]
¢þ
>WENV182852600
OKLZ01000239
[OKLZ] human gut metagenome; human gut
2205
2280
+
Ala
TGC
[ENA]
¢þ
>WENV182852602
OKLZ01000248
[OKLZ] human gut metagenome; human gut
2262
2187
-
Ala
TGC
[ENA]
¢þ
>WENV182852601
OKLZ01000239
[OKLZ] human gut metagenome; human gut
2286
2362
+
Ile
GAT
[ENA]
¢þ
>WENV182852583
OKLZ01000056
[OKLZ] human gut metagenome; human gut
2764
2839
+
Ala
GGC
[ENA]
¢þ
>WENV182852579
OKLZ01000042
[OKLZ] human gut metagenome; human gut
7655
7730
+
Phe
GAA
[ENA]
¢þ
>WENV182852563
OKLZ01000023
[OKLZ] human gut metagenome; human gut
9556
9632
+
Asp
GTC
[ENA]
¢þ
>WENV182852585
OKLZ01000080
[OKLZ] human gut metagenome; human gut
12532
12624
+
Ser
GCT
[ENA]
¢þ
>WENV182852549
OKLZ01000004
[OKLZ] human gut metagenome; human gut
19312
19238
-
Arg
CCT
[ENA]
¢þ
>WENV182852559
OKLZ01000015
[OKLZ] human gut metagenome; human gut
20515
20439
-
Arg
TCT
[ENA]
¢þ
>WENV182852582
OKLZ01000050
[OKLZ] human gut metagenome; human gut
31701
31774
+
Gly
CCC
[ENA]
¢þ
>WENV182852575
OKLZ01000032
[OKLZ] human gut metagenome; human gut
38170
38246
+
Arg
CCG
[ENA]
¢þ
>WENV182852576
OKLZ01000032
[OKLZ] human gut metagenome; human gut
38302
38377
+
His
GTG
[ENA]
¢þ
>WENV182852577
OKLZ01000032
[OKLZ] human gut metagenome; human gut
38400
38486
+
Leu
CAG
[ENA]
¢þ
>WENV182852578
OKLZ01000032
[OKLZ] human gut metagenome; human gut
38529
38605
+
Pro
TGG
[ENA]
¢þ
>WENV182852565
OKLZ01000025
[OKLZ] human gut metagenome; human gut
40520
40595
+
Phe
GAA
[ENA]
¢þ
>WENV182852581
OKLZ01000045
[OKLZ] human gut metagenome; human gut
42533
42459
-
Gln
CTG
[ENA]
¢þ
>WENV182852580
OKLZ01000045
[OKLZ] human gut metagenome; human gut
42643
42569
-
Gln
CTG
[ENA]
¢þ
>WENV182852568
OKLZ01000026
[OKLZ] human gut metagenome; human gut
50327
50241
-
Leu
CAG
[ENA]
¢þ
>WENV182852567
OKLZ01000026
[OKLZ] human gut metagenome; human gut
50443
50357
-
Leu
CAG
[ENA]
¢þ
>WENV182852566
OKLZ01000026
[OKLZ] human gut metagenome; human gut
50559
50473
-
Leu
CAG
[ENA]
¢þ
>WENV182852554
OKLZ01000007
[OKLZ] human gut metagenome; human gut
51257
51344
+
Ser
TGA
[ENA]
¢þ
>WENV182852564
OKLZ01000023
[OKLZ] human gut metagenome; human gut
55654
55579
-
Thr
CGT
[ENA]
¢þ
>WENV182852553
OKLZ01000006
[OKLZ] human gut metagenome; human gut
58930
59005
+
Ile2
CAT
[ENA]
¢þ
>WENV182852558
OKLZ01000012
[OKLZ] human gut metagenome; human gut
78663
78757
+
SeC
TCA
[ENA]
¢þ
>WENV182852547
OKLZ01000003
[OKLZ] human gut metagenome; human gut
88230
88314
+
Leu
CAA
[ENA]
¢þ
>WENV182852556
OKLZ01000011
[OKLZ] human gut metagenome; human gut
92378
92464
+
Leu
GAG
[ENA]
¢þ
>WENV182852557
OKLZ01000011
[OKLZ] human gut metagenome; human gut
96223
96299
+
fMet
CAT
[ENA]
¢þ
>WENV182852550
OKLZ01000005
[OKLZ] human gut metagenome; human gut
124469
124545
+
Val
GAC
[ENA]
¢þ
>WENV182852551
OKLZ01000005
[OKLZ] human gut metagenome; human gut
124549
124625
+
Val
GAC
[ENA]
¢þ
>WENV182852552
OKLZ01000005
[OKLZ] human gut metagenome; human gut
124629
124705
+
Val
GAC
[ENA]
¢þ
>WENV182852548
OKLZ01000004
[OKLZ] human gut metagenome; human gut
136301
136225
-
Pro
GGG
[ENA]
¢þ
>WENV182852555
OKLZ01000008
[OKLZ] human gut metagenome; human gut
138644
138731
+
Ser
GGA
[ENA]
¢þ
>WENV182852546
OKLZ01000001
[OKLZ] human gut metagenome; human gut
140690
140604
-
Leu
TAA
[ENA]
¢þ
>WENV182852545
OKLZ01000001
[OKLZ] human gut metagenome; human gut
140777
140704
-
Cys
GCA
[ENA]
¢þ
>WENV182852544
OKLZ01000001
[OKLZ] human gut metagenome; human gut
140893
140818
-
Gly
GCC
[ENA]
¢þ
>WENV182852543
OKLZ01000001
[OKLZ] human gut metagenome; human gut
163666
163577
-
Ser
CGA
[ENA]
¢þ
>WENV182852538
OKLZ01000001
[OKLZ] human gut metagenome; human gut
164658
164733
+
Asn
GTT
[ENA]
¢þ
>WENV182852539
OKLZ01000001
[OKLZ] human gut metagenome; human gut
168095
168170
+
Asn
GTT
[ENA]
¢þ
>WENV182852542
OKLZ01000001
[OKLZ] human gut metagenome; human gut
182382
182307
-
Asn
GTT
[ENA]
¢þ
>WENV182852540
OKLZ01000001
[OKLZ] human gut metagenome; human gut
184139
184214
+
Asn
GTT
[ENA]
¢þ
>WENV182852541
OKLZ01000001
[OKLZ] human gut metagenome; human gut
184416
184491
+
Asn
GTT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
BACK