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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
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|
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HOW TO USE
tRNA gene List
[OKMH] human gut metagenome; human gut
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182853110
OKMH01002606
[OKMH] human gut metagenome; human gut
55
125
+
Gly
TCC
[ENA]
¢þ
>WENV182853085
OKMH01000415
[OKMH] human gut metagenome; human gut
88
161
+
Gly
CCC
[ENA]
¢þ
>WENV182853089
OKMH01000666
[OKMH] human gut metagenome; human gut
100
175
+
Trp
CCA
[ENA]
¢þ
>WENV182853098
OKMH01001014
[OKMH] human gut metagenome; human gut
162
248
+
Leu
GAG
[ENA]
¢þ
>WENV182853100
OKMH01001282
[OKMH] human gut metagenome; human gut
206
119
-
Ser
TGA
[ENA]
¢þ
>WENV182853108
OKMH01002157
[OKMH] human gut metagenome; human gut
387
311
-
Arg
TCT
[ENA]
¢þ
>WENV182853103
OKMH01001345
[OKMH] human gut metagenome; human gut
419
333
-
Leu
TAA
[ENA]
¢þ
>WENV182853102
OKMH01001345
[OKMH] human gut metagenome; human gut
506
433
-
Cys
GCA
[ENA]
¢þ
>WENV182853101
OKMH01001345
[OKMH] human gut metagenome; human gut
622
547
-
Gly
GCC
[ENA]
¢þ
>WENV182853097
OKMH01000987
[OKMH] human gut metagenome; human gut
669
744
+
Thr
CGT
[ENA]
¢þ
>WENV182853109
OKMH01002293
[OKMH] human gut metagenome; human gut
688
763
+
Thr
TGT
[ENA]
¢þ
>WENV182853105
OKMH01001527
[OKMH] human gut metagenome; human gut
836
928
+
Ser
GCT
[ENA]
¢þ
>WENV182853096
OKMH01000982
[OKMH] human gut metagenome; human gut
845
761
-
Leu
CAA
[ENA]
¢þ
>WENV182853087
OKMH01000471
[OKMH] human gut metagenome; human gut
915
839
-
Pro
GGG
[ENA]
¢þ
>WENV182853107
OKMH01001878
[OKMH] human gut metagenome; human gut
919
995
+
Val
GAC
[ENA]
¢þ
>WENV182853106
OKMH01001527
[OKMH] human gut metagenome; human gut
933
1009
+
Arg
ACG
[ENA]
¢þ
>WENV182853092
OKMH01000749
[OKMH] human gut metagenome; human gut
934
859
-
Asn
GTT
[ENA]
¢þ
>WENV182853104
OKMH01001455
[OKMH] human gut metagenome; human gut
1157
1232
+
Ala
GGC
[ENA]
¢þ
>WENV182853079
OKMH01000109
[OKMH] human gut metagenome; human gut
1239
1165
-
Arg
CCT
[ENA]
¢þ
>WENV182853084
OKMH01000277
[OKMH] human gut metagenome; human gut
1454
1379
-
Thr
GGT
[ENA]
¢þ
>WENV182853093
OKMH01000876
[OKMH] human gut metagenome; human gut
1514
1590
+
Arg
CCG
[ENA]
¢þ
>WENV182853083
OKMH01000277
[OKMH] human gut metagenome; human gut
1534
1460
-
Gly
TCC
[ENA]
¢þ
>WENV182853090
OKMH01000709
[OKMH] human gut metagenome; human gut
1552
1638
+
Leu
CAG
[ENA]
¢þ
>WENV182853078
OKMH01000089
[OKMH] human gut metagenome; human gut
1568
1643
+
Glu
TTC
[ENA]
¢þ
>WENV182853099
OKMH01001066
[OKMH] human gut metagenome; human gut
1625
1550
-
Thr
TGT
[ENA]
¢þ
>WENV182853094
OKMH01000876
[OKMH] human gut metagenome; human gut
1646
1721
+
His
GTG
[ENA]
¢þ
>WENV182853082
OKMH01000277
[OKMH] human gut metagenome; human gut
1734
1650
-
Tyr
GTA
[ENA]
¢þ
>WENV182853095
OKMH01000876
[OKMH] human gut metagenome; human gut
1745
1831
+
Leu
CAG
[ENA]
¢þ
>WENV182853080
OKMH01000131
[OKMH] human gut metagenome; human gut
1818
1893
+
Lys
TTT
[ENA]
¢þ
>WENV182853091
OKMH01000749
[OKMH] human gut metagenome; human gut
1926
2015
+
Ser
CGA
[ENA]
¢þ
>WENV182853088
OKMH01000477
[OKMH] human gut metagenome; human gut
2653
2559
-
SeC
TCA
[ENA]
¢þ
>WENV182853086
OKMH01000461
[OKMH] human gut metagenome; human gut
2680
2756
+
Asp
GTC
[ENA]
¢þ
>WENV182853081
OKMH01000156
[OKMH] human gut metagenome; human gut
2903
2979
+
Pro
CGG
[ENA]
¢þ
>WENV182853077
OKMH01000015
[OKMH] human gut metagenome; human gut
3913
3837
-
fMet
CAT
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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