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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
[OKMN] human gut metagenome; human gut
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>WENV182853776
OKMN01000001
[OKMN] human gut metagenome; human gut
90
165
+
Ala
GGC
[ENA]
¢þ
>WENV182853888
OKMN01000372
[OKMN] human gut metagenome; human gut
118
191
+
Thr
GGT
[ENA]
¢þ
>WENV182853876
OKMN01000283
[OKMN] human gut metagenome; human gut
133
57
-
Pro
CGG
[ENA]
¢þ
>WENV182853909
OKMN01001301
[OKMN] human gut metagenome; human gut
136
211
+
Thr
CGT
[ENA]
¢þ
>WENV182853884
OKMN01000325
[OKMN] human gut metagenome; human gut
143
56
-
Leu
CAG
[ENA]
¢þ
>WENV182853895
OKMN01000486
[OKMN] human gut metagenome; human gut
143
217
+
Leu
CAA
[ENA]
¢þ
>WENV182853796
OKMN01000022
[OKMN] human gut metagenome; human gut
150
58
-
Ser
GCT
[ENA]
¢þ
>WENV182853901
OKMN01000859
[OKMN] human gut metagenome; human gut
167
243
+
Ile
GAT
[ENA]
¢þ
>WENV182853883
OKMN01000322
[OKMN] human gut metagenome; human gut
209
136
-
Arg
TCT
[ENA]
¢þ
>WENV182853889
OKMN01000372
[OKMN] human gut metagenome; human gut
224
299
+
Met
CAT
[ENA]
¢þ
>WENV182853902
OKMN01000859
[OKMN] human gut metagenome; human gut
250
325
+
Ala
TGC
[ENA]
¢þ
>WENV182853887
OKMN01000368
[OKMN] human gut metagenome; human gut
259
172
-
Ser
TGA
[ENA]
¢þ
>WENV182853894
OKMN01000439
[OKMN] human gut metagenome; human gut
320
395
+
Ala
CGC
[ENA]
¢þ
>WENV182853900
OKMN01000694
[OKMN] human gut metagenome; human gut
359
284
-
Lys
TTT
[ENA]
¢þ
>WENV182853893
OKMN01000420
[OKMN] human gut metagenome; human gut
379
304
-
Thr
GGT
[ENA]
¢þ
>WENV182853904
OKMN01000902
[OKMN] human gut metagenome; human gut
432
358
-
Lys
CTT
[ENA]
¢þ
>WENV182853892
OKMN01000420
[OKMN] human gut metagenome; human gut
460
386
-
Gly
TCC
[ENA]
¢þ
>WENV182853851
OKMN01000176
[OKMN] human gut metagenome; human gut
530
619
+
Ser
CGA
[ENA]
¢þ
>WENV182853905
OKMN01000945
[OKMN] human gut metagenome; human gut
561
653
+
Ser
TGA
[ENA]
¢þ
>WENV182853822
OKMN01000072
[OKMN] human gut metagenome; human gut
603
678
+
Asn
GTT
[ENA]
¢þ
>WENV182853891
OKMN01000420
[OKMN] human gut metagenome; human gut
661
577
-
Tyr
GTA
[ENA]
¢þ
>WENV182853863
OKMN01000265
[OKMN] human gut metagenome; human gut
663
587
-
Asp
GTC
[ENA]
¢þ
>WENV182853906
OKMN01000945
[OKMN] human gut metagenome; human gut
665
738
+
fMet
CAT
[ENA]
¢þ
>WENV182853903
OKMN01000897
[OKMN] human gut metagenome; human gut
668
594
-
Arg
CCT
[ENA]
¢þ
>WENV182853908
OKMN01000989
[OKMN] human gut metagenome; human gut
737
812
+
Ala
GGC
[ENA]
¢þ
>WENV182853890
OKMN01000420
[OKMN] human gut metagenome; human gut
745
670
-
Thr
TGT
[ENA]
¢þ
>WENV182853907
OKMN01000945
[OKMN] human gut metagenome; human gut
753
828
+
Asp
GTC
[ENA]
¢þ
>WENV182853897
OKMN01000503
[OKMN] human gut metagenome; human gut
887
812
-
Ile2
CAT
[ENA]
¢þ
>WENV182853847
OKMN01000155
[OKMN] human gut metagenome; human gut
988
915
-
Gly
CCC
[ENA]
¢þ
>WENV182853896
OKMN01000503
[OKMN] human gut metagenome; human gut
1604
1532
-
Asn
GTT
[ENA]
¢þ
>WENV182853834
OKMN01000118
[OKMN] human gut metagenome; human gut
1736
1662
-
Pro
GGG
[ENA]
¢þ
>WENV182853877
OKMN01000292
[OKMN] human gut metagenome; human gut
1839
1752
-
Ser
GGA
[ENA]
¢þ
>WENV182853898
OKMN01000535
[OKMN] human gut metagenome; human gut
2287
2212
-
Ile2
CAT
[ENA]
¢þ
>WENV182853881
OKMN01000312
[OKMN] human gut metagenome; human gut
2373
2298
-
Thr
TGT
[ENA]
¢þ
>WENV182853899
OKMN01000545
[OKMN] human gut metagenome; human gut
2450
2524
+
fMet
CAT
[ENA]
¢þ
>WENV182853879
OKMN01000298
[OKMN] human gut metagenome; human gut
2578
2504
-
Asp
GTC
[ENA]
¢þ
>WENV182853878
OKMN01000298
[OKMN] human gut metagenome; human gut
2724
2651
-
Glu
TTC
[ENA]
¢þ
>WENV182853814
OKMN01000041
[OKMN] human gut metagenome; human gut
3561
3634
+
Ile2
CAT
[ENA]
¢þ
>WENV182853848
OKMN01000161
[OKMN] human gut metagenome; human gut
3690
3605
-
Ser
GGA
[ENA]
¢þ
>WENV182853858
OKMN01000222
[OKMN] human gut metagenome; human gut
4863
4790
-
Arg
CCT
[ENA]
¢þ
>WENV182853865
OKMN01000269
[OKMN] human gut metagenome; human gut
5100
5024
-
Pro
TGG
[ENA]
¢þ
>WENV182853864
OKMN01000269
[OKMN] human gut metagenome; human gut
5271
5344
+
Gly
TCC
[ENA]
¢þ
>WENV182853885
OKMN01000333
[OKMN] human gut metagenome; human gut
5352
5281
-
Gln
TTG
[ENA]
¢þ
>WENV182853857
OKMN01000209
[OKMN] human gut metagenome; human gut
5417
5490
+
Arg
ACG
[ENA]
¢þ
>WENV182853886
OKMN01000347
[OKMN] human gut metagenome; human gut
5597
5672
+
Ala
GGC
[ENA]
¢þ
>WENV182853853
OKMN01000192
[OKMN] human gut metagenome; human gut
5632
5559
-
Glu
CTC
[ENA]
¢þ
>WENV182853852
OKMN01000192
[OKMN] human gut metagenome; human gut
5738
5666
-
Gln
CTG
[ENA]
¢þ
>WENV182853882
OKMN01000320
[OKMN] human gut metagenome; human gut
5766
5691
-
Val
TAC
[ENA]
¢þ
>WENV182853875
OKMN01000280
[OKMN] human gut metagenome; human gut
6016
6090
+
Thr
CGT
[ENA]
¢þ
>WENV182853880
OKMN01000301
[OKMN] human gut metagenome; human gut
6375
6301
-
Leu
TAA
[ENA]
¢þ
>WENV182853874
OKMN01000274
[OKMN] human gut metagenome; human gut
7417
7344
-
Glu
TTC
[ENA]
¢þ
>WENV182853873
OKMN01000274
[OKMN] human gut metagenome; human gut
7505
7430
-
Ile
GAT
[ENA]
¢þ
>WENV182853872
OKMN01000274
[OKMN] human gut metagenome; human gut
7584
7514
-
Gly
TCC
[ENA]
¢þ
>WENV182853871
OKMN01000274
[OKMN] human gut metagenome; human gut
7662
7586
-
Asp
GTC
[ENA]
¢þ
>WENV182853870
OKMN01000274
[OKMN] human gut metagenome; human gut
7775
7700
-
fMet
CAT
[ENA]
¢þ
>WENV182853844
OKMN01000145
[OKMN] human gut metagenome; human gut
7803
7877
+
Ile
GAT
[ENA]
¢þ
>WENV182853869
OKMN01000274
[OKMN] human gut metagenome; human gut
7897
7808
-
Ser
TGA
[ENA]
¢þ
>WENV182853868
OKMN01000274
[OKMN] human gut metagenome; human gut
8005
7930
-
Ile2
CAT
[ENA]
¢þ
>WENV182853860
OKMN01000227
[OKMN] human gut metagenome; human gut
8006
8092
+
Leu
CAG
[ENA]
¢þ
>WENV182853867
OKMN01000274
[OKMN] human gut metagenome; human gut
8099
8024
-
Met
CAT
[ENA]
¢þ
>WENV182853861
OKMN01000227
[OKMN] human gut metagenome; human gut
8121
8207
+
Leu
CAG
[ENA]
¢þ
>WENV182853845
OKMN01000145
[OKMN] human gut metagenome; human gut
8141
8216
+
Ala
TGC
[ENA]
¢þ
>WENV182853866
OKMN01000274
[OKMN] human gut metagenome; human gut
8194
8122
-
Ala
TGC
[ENA]
¢þ
>WENV182853856
OKMN01000199
[OKMN] human gut metagenome; human gut
8211
8137
-
Val
CAC
[ENA]
¢þ
>WENV182853862
OKMN01000227
[OKMN] human gut metagenome; human gut
8242
8328
+
Leu
CAG
[ENA]
¢þ
>WENV182853855
OKMN01000199
[OKMN] human gut metagenome; human gut
8283
8212
-
Cys
GCA
[ENA]
¢þ
>WENV182853854
OKMN01000199
[OKMN] human gut metagenome; human gut
8372
8299
-
Gly
GCC
[ENA]
¢þ
>WENV182853817
OKMN01000059
[OKMN] human gut metagenome; human gut
8459
8383
-
Pro
CGG
[ENA]
¢þ
>WENV182853813
OKMN01000038
[OKMN] human gut metagenome; human gut
8739
8664
-
Asn
GTT
[ENA]
¢þ
>WENV182853827
OKMN01000103
[OKMN] human gut metagenome; human gut
8787
8869
+
Tyr
GTA
[ENA]
¢þ
>WENV182853828
OKMN01000103
[OKMN] human gut metagenome; human gut
8873
8946
+
Trp
CCA
[ENA]
¢þ
>WENV182853829
OKMN01000103
[OKMN] human gut metagenome; human gut
8983
9056
+
His
GTG
[ENA]
¢þ
>WENV182853830
OKMN01000103
[OKMN] human gut metagenome; human gut
9069
9142
+
Gln
TTG
[ENA]
¢þ
>WENV182853831
OKMN01000103
[OKMN] human gut metagenome; human gut
9167
9237
+
Cys
GCA
[ENA]
¢þ
>WENV182853832
OKMN01000103
[OKMN] human gut metagenome; human gut
9250
9335
+
Leu
CAA
[ENA]
¢þ
>WENV182853859
OKMN01000224
[OKMN] human gut metagenome; human gut
9963
10036
+
Arg
CCG
[ENA]
¢þ
>WENV182853850
OKMN01000173
[OKMN] human gut metagenome; human gut
10768
10854
+
Leu
GAG
[ENA]
¢þ
>WENV182853846
OKMN01000149
[OKMN] human gut metagenome; human gut
10880
10953
+
His
GTG
[ENA]
¢þ
>WENV182853812
OKMN01000038
[OKMN] human gut metagenome; human gut
11148
11073
-
Asn
GTT
[ENA]
¢þ
>WENV182853833
OKMN01000114
[OKMN] human gut metagenome; human gut
11894
11819
-
Phe
GAA
[ENA]
¢þ
>WENV182853824
OKMN01000086
[OKMN] human gut metagenome; human gut
12166
12239
+
Lys
TTT
[ENA]
¢þ
>WENV182853809
OKMN01000038
[OKMN] human gut metagenome; human gut
12897
12972
+
Asn
GTT
[ENA]
¢þ
>WENV182853849
OKMN01000168
[OKMN] human gut metagenome; human gut
13192
13273
+
Leu
TAG
[ENA]
¢þ
>WENV182853789
OKMN01000016
[OKMN] human gut metagenome; human gut
15993
15918
-
Ile2
CAT
[ENA]
¢þ
>WENV182853787
OKMN01000013
[OKMN] human gut metagenome; human gut
17025
16953
-
Thr
CGT
[ENA]
¢þ
>WENV182853843
OKMN01000132
[OKMN] human gut metagenome; human gut
17066
16993
-
Pro
TGG
[ENA]
¢þ
>WENV182853842
OKMN01000132
[OKMN] human gut metagenome; human gut
17151
17078
-
Arg
ACG
[ENA]
¢þ
>WENV182853841
OKMN01000132
[OKMN] human gut metagenome; human gut
17251
17166
-
Leu
TAA
[ENA]
¢þ
>WENV182853840
OKMN01000132
[OKMN] human gut metagenome; human gut
17338
17267
-
Gly
GCC
[ENA]
¢þ
>WENV182853839
OKMN01000132
[OKMN] human gut metagenome; human gut
17418
17343
-
Thr
TGT
[ENA]
¢þ
>WENV182853838
OKMN01000132
[OKMN] human gut metagenome; human gut
17507
17424
-
Leu
TAG
[ENA]
¢þ
>WENV182853837
OKMN01000132
[OKMN] human gut metagenome; human gut
17596
17522
-
Lys
TTT
[ENA]
¢þ
>WENV182853836
OKMN01000132
[OKMN] human gut metagenome; human gut
17675
17601
-
Val
TAC
[ENA]
¢þ
>WENV182853835
OKMN01000125
[OKMN] human gut metagenome; human gut
18443
18519
+
Arg
TCT
[ENA]
¢þ
>WENV182853816
OKMN01000044
[OKMN] human gut metagenome; human gut
18518
18593
+
Arg
CCT
[ENA]
¢þ
>WENV182853820
OKMN01000069
[OKMN] human gut metagenome; human gut
19531
19456
-
Gly
GCC
[ENA]
¢þ
>WENV182853819
OKMN01000069
[OKMN] human gut metagenome; human gut
19642
19567
-
Gly
GCC
[ENA]
¢þ
>WENV182853818
OKMN01000069
[OKMN] human gut metagenome; human gut
19753
19678
-
Gly
GCC
[ENA]
¢þ
>WENV182853825
OKMN01000093
[OKMN] human gut metagenome; human gut
20907
20982
+
Thr
CGT
[ENA]
¢þ
>WENV182853811
OKMN01000038
[OKMN] human gut metagenome; human gut
26450
26375
-
Asn
GTT
[ENA]
¢þ
>WENV182853810
OKMN01000038
[OKMN] human gut metagenome; human gut
27442
27531
+
Ser
CGA
[ENA]
¢þ
>WENV182853826
OKMN01000095
[OKMN] human gut metagenome; human gut
29373
29297
-
Arg
ACG
[ENA]
¢þ
>WENV182853815
OKMN01000042
[OKMN] human gut metagenome; human gut
30225
30297
+
Thr
GGT
[ENA]
¢þ
>WENV182853823
OKMN01000080
[OKMN] human gut metagenome; human gut
32228
32303
+
Arg
TCT
[ENA]
¢þ
>WENV182853800
OKMN01000030
[OKMN] human gut metagenome; human gut
32601
32677
+
Met
CAT
[ENA]
¢þ
>WENV182853801
OKMN01000030
[OKMN] human gut metagenome; human gut
32686
32770
+
Leu
TAG
[ENA]
¢þ
>WENV182853802
OKMN01000030
[OKMN] human gut metagenome; human gut
32794
32868
+
Gln
TTG
[ENA]
¢þ
>WENV182853803
OKMN01000030
[OKMN] human gut metagenome; human gut
32903
32977
+
Gln
TTG
[ENA]
¢þ
>WENV182853804
OKMN01000030
[OKMN] human gut metagenome; human gut
32993
33069
+
Met
CAT
[ENA]
¢þ
>WENV182853821
OKMN01000071
[OKMN] human gut metagenome; human gut
33057
33130
+
Arg
CCG
[ENA]
¢þ
>WENV182853805
OKMN01000030
[OKMN] human gut metagenome; human gut
33117
33191
+
Gln
CTG
[ENA]
¢þ
>WENV182853806
OKMN01000030
[OKMN] human gut metagenome; human gut
33229
33303
+
Gln
CTG
[ENA]
¢þ
>WENV182853807
OKMN01000031
[OKMN] human gut metagenome; human gut
37534
37610
+
Val
GAC
[ENA]
¢þ
>WENV182853808
OKMN01000031
[OKMN] human gut metagenome; human gut
37615
37691
+
Val
GAC
[ENA]
¢þ
>WENV182853797
OKMN01000023
[OKMN] human gut metagenome; human gut
39665
39589
-
fMet
CAT
[ENA]
¢þ
>WENV182853778
OKMN01000002
[OKMN] human gut metagenome; human gut
45431
45518
+
Ser
GGA
[ENA]
¢þ
>WENV182853794
OKMN01000018
[OKMN] human gut metagenome; human gut
51686
51610
-
Pro
TGG
[ENA]
¢þ
>WENV182853793
OKMN01000018
[OKMN] human gut metagenome; human gut
51815
51729
-
Leu
CAG
[ENA]
¢þ
>WENV182853792
OKMN01000018
[OKMN] human gut metagenome; human gut
51911
51836
-
His
GTG
[ENA]
¢þ
>WENV182853791
OKMN01000018
[OKMN] human gut metagenome; human gut
52046
51970
-
Arg
CCG
[ENA]
¢þ
>WENV182853788
OKMN01000015
[OKMN] human gut metagenome; human gut
61801
61888
+
Ser
TGA
[ENA]
¢þ
>WENV182853783
OKMN01000008
[OKMN] human gut metagenome; human gut
62822
62908
+
Leu
GAG
[ENA]
¢þ
>WENV182853798
OKMN01000026
[OKMN] human gut metagenome; human gut
63916
63992
+
Pro
GGG
[ENA]
¢þ
>WENV182853784
OKMN01000008
[OKMN] human gut metagenome; human gut
66691
66767
+
fMet
CAT
[ENA]
¢þ
>WENV182853777
OKMN01000001
[OKMN] human gut metagenome; human gut
69587
69513
-
Arg
CCT
[ENA]
¢þ
>WENV182853799
OKMN01000028
[OKMN] human gut metagenome; human gut
69587
69681
+
SeC
TCA
[ENA]
¢þ
>WENV182853795
OKMN01000019
[OKMN] human gut metagenome; human gut
85815
85899
+
Leu
CAA
[ENA]
¢þ
>WENV182853790
OKMN01000018
[OKMN] human gut metagenome; human gut
87466
87391
-
Trp
CCA
[ENA]
¢þ
>WENV182853782
OKMN01000004
[OKMN] human gut metagenome; human gut
92837
92921
+
Tyr
GTA
[ENA]
¢þ
>WENV182853786
OKMN01000011
[OKMN] human gut metagenome; human gut
110892
110965
+
Gly
CCC
[ENA]
¢þ
>WENV182853785
OKMN01000010
[OKMN] human gut metagenome; human gut
112410
112496
+
Leu
GAG
[ENA]
¢þ
>WENV182853781
OKMN01000003
[OKMN] human gut metagenome; human gut
132498
132412
-
Leu
TAA
[ENA]
¢þ
>WENV182853780
OKMN01000003
[OKMN] human gut metagenome; human gut
132584
132511
-
Cys
GCA
[ENA]
¢þ
>WENV182853779
OKMN01000003
[OKMN] human gut metagenome; human gut
132713
132638
-
Gly
GCC
[ENA]
¢þ
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
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